RNA–Protein interactions for RNA: ENST00000331029.11

EWSR1-201, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5 BASIC

Gene EWSR1, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-201ENST00000331029 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
EWSR1-201ENST00000331029 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
EWSR1-201ENST00000331029 ZCCHC6Q5VYS8 1495 aaKnown RBP29.84■■■□□ 2.37
EWSR1-201ENST00000331029 SHROOM4Q9ULL8 1493 aa29.5■■■□□ 2.31
EWSR1-201ENST00000331029 DCAF8L2P0C7V8 631 aa29.43■■■□□ 2.3
EWSR1-201ENST00000331029 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.26
EWSR1-201ENST00000331029 ABCC9O60706 1549 aa28.93■■■□□ 2.22
EWSR1-201ENST00000331029 SUPT5HO00267 1087 aaKnown RBP28.73■■■□□ 2.19
EWSR1-201ENST00000331029 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
EWSR1-201ENST00000331029 NACADO15069 1562 aa28.38■■■□□ 2.13
EWSR1-201ENST00000331029 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
EWSR1-201ENST00000331029 RB1CC1Q8TDY2 1594 aa28.17■■■□□ 2.1
EWSR1-201ENST00000331029 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
EWSR1-201ENST00000331029 RSF1Q96T23 1441 aaPredicted RBP27.73■■■□□ 2.03
EWSR1-201ENST00000331029 UNC13AQ9UPW8 1703 aa27.56■■■□□ 2
EWSR1-201ENST00000331029 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
EWSR1-201ENST00000331029 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
EWSR1-201ENST00000331029 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.978e-9■□□□□ 10.7
EWSR1-201ENST00000331029 BICRAQ9NZM4 1560 aa27.29■■□□□ 1.96
EWSR1-201ENST00000331029 WIZO95785 1651 aa27.21■■□□□ 1.95
EWSR1-201ENST00000331029 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
EWSR1-201ENST00000331029 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
EWSR1-201ENST00000331029 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
EWSR1-201ENST00000331029 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
EWSR1-201ENST00000331029 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
EWSR1-201ENST00000331029 EIF4G1Q04637 1599 aaKnown RBP26.79■■□□□ 1.88
EWSR1-201ENST00000331029 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
EWSR1-201ENST00000331029 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
EWSR1-201ENST00000331029 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
EWSR1-201ENST00000331029 FAM9AQ8IZU1 332 aaPredicted RBP26.51■■□□□ 1.83
EWSR1-201ENST00000331029 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
EWSR1-201ENST00000331029 ABCC8Q09428 1581 aa26.4■■□□□ 1.82
EWSR1-201ENST00000331029 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
EWSR1-201ENST00000331029 HRCP23327 699 aa26.28■■□□□ 1.8
EWSR1-201ENST00000331029 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
EWSR1-201ENST00000331029 NCAPD3P42695 1498 aa26.2■■□□□ 1.79
EWSR1-201ENST00000331029 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
EWSR1-201ENST00000331029 EHMT2Q96KQ7 1210 aa26.17■■□□□ 1.78
EWSR1-201ENST00000331029 CC2D2AQ9P2K1 1620 aa26.16■■□□□ 1.78
EWSR1-201ENST00000331029 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
EWSR1-201ENST00000331029 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
EWSR1-201ENST00000331029 SOGA1O94964 1423 aa26.05■■□□□ 1.76
EWSR1-201ENST00000331029 EEA1Q15075 1411 aa26.04■■□□□ 1.76
EWSR1-201ENST00000331029 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
EWSR1-201ENST00000331029 RUSC2Q8N2Y8 1516 aa25.92■■□□□ 1.74
EWSR1-201ENST00000331029 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
EWSR1-201ENST00000331029 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
EWSR1-201ENST00000331029 CEP162Q5TB80 1403 aa25.78■■□□□ 1.72
EWSR1-201ENST00000331029 GOLGA3Q08378 1498 aa25.77■■□□□ 1.72
EWSR1-201ENST00000331029 TOP2BQ02880 1626 aa25.76■■□□□ 1.71
EWSR1-201ENST00000331029 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
EWSR1-201ENST00000331029 KIF21BO75037 1637 aa25.7■■□□□ 1.71
EWSR1-201ENST00000331029 PPARGC1BQ86YN6 1023 aaKnown RBP25.7■■□□□ 1.7
EWSR1-201ENST00000331029 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
EWSR1-201ENST00000331029 CEP164Q9UPV0 1460 aa25.68■■□□□ 1.7
EWSR1-201ENST00000331029 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
EWSR1-201ENST00000331029 CFTRP13569 1480 aa25.64■■□□□ 1.69
EWSR1-201ENST00000331029 CADPSQ9ULU8 1353 aa25.54■■□□□ 1.68
EWSR1-201ENST00000331029 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
EWSR1-201ENST00000331029 CUX1P39880 1505 aa25.54■■□□□ 1.68
EWSR1-201ENST00000331029 ZEB1P37275 1124 aaPredicted RBP25.5■■□□□ 1.67
EWSR1-201ENST00000331029 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
EWSR1-201ENST00000331029 CLIP1P30622 1438 aa25.39■■□□□ 1.66
EWSR1-201ENST00000331029 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
EWSR1-201ENST00000331029 PRXQ9BXM0 1461 aa25.36■■□□□ 1.65
EWSR1-201ENST00000331029 NESP48681 1621 aa25.34■■□□□ 1.65
EWSR1-201ENST00000331029 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
EWSR1-201ENST00000331029 KIF27Q86VH2 1401 aa25.32■■□□□ 1.64
EWSR1-201ENST00000331029 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
EWSR1-201ENST00000331029 TTBK1Q5TCY1 1321 aaPredicted RBP25.26■■□□□ 1.63
EWSR1-201ENST00000331029 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
EWSR1-201ENST00000331029 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
EWSR1-201ENST00000331029 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
EWSR1-201ENST00000331029 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
EWSR1-201ENST00000331029 CUX2O14529 1486 aa25.12■■□□□ 1.61
EWSR1-201ENST00000331029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
EWSR1-201ENST00000331029 CCER1Q8TC90 406 aaPredicted RBP25.07■■□□□ 1.6
EWSR1-201ENST00000331029 ARAP1Q96P48 1450 aa25.07■■□□□ 1.6
EWSR1-201ENST00000331029 IGF1RP08069 1367 aa25.04■■□□□ 1.6
EWSR1-201ENST00000331029 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
EWSR1-201ENST00000331029 APLP2Q06481 763 aa25.03■■□□□ 1.6
EWSR1-201ENST00000331029 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
EWSR1-201ENST00000331029 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
EWSR1-201ENST00000331029 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
EWSR1-201ENST00000331029 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
EWSR1-201ENST00000331029 ARHGAP35Q9NRY4 1499 aa24.92■■□□□ 1.58
EWSR1-201ENST00000331029 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
EWSR1-201ENST00000331029 POLA1P09884 1462 aaPredicted RBP24.9■■□□□ 1.58
EWSR1-201ENST00000331029 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.58
EWSR1-201ENST00000331029 PELP1Q8IZL8 1130 aaKnown RBP24.89■■□□□ 1.57
EWSR1-201ENST00000331029 ERCC6Q03468 1493 aa24.85■■□□□ 1.57
EWSR1-201ENST00000331029 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
EWSR1-201ENST00000331029 HNRNPUL2Q1KMD3 747 aaKnown RBP24.78■■□□□ 1.56
EWSR1-201ENST00000331029 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
EWSR1-201ENST00000331029 CUL7Q14999 1698 aa24.75■■□□□ 1.55
EWSR1-201ENST00000331029 KANK4Q5T7N3 995 aaPredicted RBP24.74■■□□□ 1.55
EWSR1-201ENST00000331029 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
EWSR1-201ENST00000331029 WDR62O43379 1518 aa24.68■■□□□ 1.54
EWSR1-201ENST00000331029 MAP3K1Q13233 1512 aa24.65■■□□□ 1.54
EWSR1-201ENST00000331029 ABCA5Q8WWZ7 1642 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms