RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
CDK5RAP3-218ENST00000580391 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
CDK5RAP3-218ENST00000580391 ZCCHC6Q5VYS8 1495 aaKnown RBP28.29■■■□□ 2.12
CDK5RAP3-218ENST00000580391 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.04
CDK5RAP3-218ENST00000580391 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
CDK5RAP3-218ENST00000580391 ABCC9O60706 1549 aa27.67■■■□□ 2.02
CDK5RAP3-218ENST00000580391 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
CDK5RAP3-218ENST00000580391 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
CDK5RAP3-218ENST00000580391 NACADO15069 1562 aa27.24■■□□□ 1.95
CDK5RAP3-218ENST00000580391 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
CDK5RAP3-218ENST00000580391 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
CDK5RAP3-218ENST00000580391 UNC13AQ9UPW8 1703 aa26.64■■□□□ 1.86
CDK5RAP3-218ENST00000580391 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
CDK5RAP3-218ENST00000580391 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
CDK5RAP3-218ENST00000580391 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
CDK5RAP3-218ENST00000580391 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
CDK5RAP3-218ENST00000580391 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.762e-10■■□□□ 14.3
CDK5RAP3-218ENST00000580391 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
CDK5RAP3-218ENST00000580391 BAZ1AQ9NRL2 1556 aaPredicted RBP25.96■■□□□ 1.75
CDK5RAP3-218ENST00000580391 SMARCA4P51532 1647 aa25.89■■□□□ 1.73
CDK5RAP3-218ENST00000580391 WIZO95785 1651 aa25.86■■□□□ 1.73
CDK5RAP3-218ENST00000580391 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
CDK5RAP3-218ENST00000580391 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
CDK5RAP3-218ENST00000580391 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
CDK5RAP3-218ENST00000580391 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.65
CDK5RAP3-218ENST00000580391 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
CDK5RAP3-218ENST00000580391 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
CDK5RAP3-218ENST00000580391 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
CDK5RAP3-218ENST00000580391 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
CDK5RAP3-218ENST00000580391 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
CDK5RAP3-218ENST00000580391 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
CDK5RAP3-218ENST00000580391 CC2D2AQ9P2K1 1620 aa25.06■■□□□ 1.6
CDK5RAP3-218ENST00000580391 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
CDK5RAP3-218ENST00000580391 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
CDK5RAP3-218ENST00000580391 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
CDK5RAP3-218ENST00000580391 CFTRP13569 1480 aa24.6■■□□□ 1.53
CDK5RAP3-218ENST00000580391 WRNQ14191 1432 aaPredicted RBP eCLIP24.56■■□□□ 1.52
CDK5RAP3-218ENST00000580391 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
CDK5RAP3-218ENST00000580391 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
CDK5RAP3-218ENST00000580391 FAM9AQ8IZU1 332 aaPredicted RBP24.43■■□□□ 1.5
CDK5RAP3-218ENST00000580391 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
CDK5RAP3-218ENST00000580391 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
CDK5RAP3-218ENST00000580391 LOC105371045A0A1W2PR82 267 aa24.39■■□□□ 1.49
CDK5RAP3-218ENST00000580391 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
CDK5RAP3-218ENST00000580391 NESP48681 1621 aa24.34■■□□□ 1.49
CDK5RAP3-218ENST00000580391 CUX1P39880 1505 aa24.33■■□□□ 1.48
CDK5RAP3-218ENST00000580391 SOGA1O94964 1423 aa24.31■■□□□ 1.48
CDK5RAP3-218ENST00000580391 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
CDK5RAP3-218ENST00000580391 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
CDK5RAP3-218ENST00000580391 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
CDK5RAP3-218ENST00000580391 EEA1Q15075 1411 aa24.19■■□□□ 1.46
CDK5RAP3-218ENST00000580391 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.45
CDK5RAP3-218ENST00000580391 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
CDK5RAP3-218ENST00000580391 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
CDK5RAP3-218ENST00000580391 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
CDK5RAP3-218ENST00000580391 PDS5BQ9NTI5 1447 aa24.04■■□□□ 1.44
CDK5RAP3-218ENST00000580391 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
CDK5RAP3-218ENST00000580391 CSRNP3Q8WYN3 585 aa24.03■■□□□ 1.44
CDK5RAP3-218ENST00000580391 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
CDK5RAP3-218ENST00000580391 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
CDK5RAP3-218ENST00000580391 KIF21BO75037 1637 aa23.98■■□□□ 1.43
CDK5RAP3-218ENST00000580391 GOLGA3Q08378 1498 aa23.92■■□□□ 1.42
CDK5RAP3-218ENST00000580391 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
CDK5RAP3-218ENST00000580391 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
CDK5RAP3-218ENST00000580391 CUX2O14529 1486 aa23.88■■□□□ 1.41
CDK5RAP3-218ENST00000580391 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
CDK5RAP3-218ENST00000580391 WDR97A6NE52 1622 aa23.83■■□□□ 1.41
CDK5RAP3-218ENST00000580391 RAPGEF2Q9Y4G8 1499 aa23.82■■□□□ 1.4
CDK5RAP3-218ENST00000580391 TNIKQ9UKE5 1360 aa23.81■■□□□ 1.4
CDK5RAP3-218ENST00000580391 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
CDK5RAP3-218ENST00000580391 PRXQ9BXM0 1461 aa23.79■■□□□ 1.4
CDK5RAP3-218ENST00000580391 MRC2Q9UBG0 1479 aa23.79■■□□□ 1.4
CDK5RAP3-218ENST00000580391 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
CDK5RAP3-218ENST00000580391 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
CDK5RAP3-218ENST00000580391 CEP162Q5TB80 1403 aa23.75■■□□□ 1.39
CDK5RAP3-218ENST00000580391 WDR62O43379 1518 aa23.69■■□□□ 1.38
CDK5RAP3-218ENST00000580391 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
CDK5RAP3-218ENST00000580391 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
CDK5RAP3-218ENST00000580391 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
CDK5RAP3-218ENST00000580391 IGF1RP08069 1367 aa23.67■■□□□ 1.38
CDK5RAP3-218ENST00000580391 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
CDK5RAP3-218ENST00000580391 CUL7Q14999 1698 aa23.58■■□□□ 1.37
CDK5RAP3-218ENST00000580391 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
CDK5RAP3-218ENST00000580391 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
CDK5RAP3-218ENST00000580391 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
CDK5RAP3-218ENST00000580391 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
CDK5RAP3-218ENST00000580391 CLIP1P30622 1438 aa23.53■■□□□ 1.36
CDK5RAP3-218ENST00000580391 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
CDK5RAP3-218ENST00000580391 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
CDK5RAP3-218ENST00000580391 ZNF608Q9ULD9 1512 aaPredicted RBP23.42■■□□□ 1.34
CDK5RAP3-218ENST00000580391 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.341e-7■■■■□ 24.7
CDK5RAP3-218ENST00000580391 CTTNBP2Q8WZ74 1663 aa23.4■■□□□ 1.34
CDK5RAP3-218ENST00000580391 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.33
CDK5RAP3-218ENST00000580391 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
CDK5RAP3-218ENST00000580391 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
CDK5RAP3-218ENST00000580391 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
CDK5RAP3-218ENST00000580391 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
CDK5RAP3-218ENST00000580391 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
CDK5RAP3-218ENST00000580391 ARHGAP35Q9NRY4 1499 aa23.31■■□□□ 1.32
CDK5RAP3-218ENST00000580391 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms