RNA–Protein interactions for RNA: ENST00000557460.5

SRSF5-219, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 5

Gene SRSF5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-219ENST00000557460 AEBP2Q6ZN18 517 aaPredicted RBP27.02■■□□□ 1.92
SRSF5-219ENST00000557460 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
SRSF5-219ENST00000557460 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
SRSF5-219ENST00000557460 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
SRSF5-219ENST00000557460 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
SRSF5-219ENST00000557460 FOXD1Q16676 465 aa21.26■□□□□ 0.99
SRSF5-219ENST00000557460 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
SRSF5-219ENST00000557460 ADRA2BP18089 450 aa20.4■□□□□ 0.86
SRSF5-219ENST00000557460 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
SRSF5-219ENST00000557460 PIAS4Q8N2W9 510 aaPredicted RBP19.99■□□□□ 0.79
SRSF5-219ENST00000557460 MSH5O43196 834 aa19.57■□□□□ 0.72
SRSF5-219ENST00000557460 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
SRSF5-219ENST00000557460 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
SRSF5-219ENST00000557460 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
SRSF5-219ENST00000557460 KCNA4P22459 653 aa18.42■□□□□ 0.54
SRSF5-219ENST00000557460 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.52
SRSF5-219ENST00000557460 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
SRSF5-219ENST00000557460 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
SRSF5-219ENST00000557460 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
SRSF5-219ENST00000557460 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
SRSF5-219ENST00000557460 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
SRSF5-219ENST00000557460 POTEDQ86YR6 584 aa17.83■□□□□ 0.44
SRSF5-219ENST00000557460 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
SRSF5-219ENST00000557460 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
SRSF5-219ENST00000557460 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
SRSF5-219ENST00000557460 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
SRSF5-219ENST00000557460 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
SRSF5-219ENST00000557460 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.32
SRSF5-219ENST00000557460 ZBTB22O15209 634 aa16.98■□□□□ 0.31
SRSF5-219ENST00000557460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.312e-16■■□□□ 13.6
SRSF5-219ENST00000557460 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
SRSF5-219ENST00000557460 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
SRSF5-219ENST00000557460 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
SRSF5-219ENST00000557460 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
SRSF5-219ENST00000557460 ABCC9O60706 1549 aa16.81■□□□□ 0.28
SRSF5-219ENST00000557460 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
SRSF5-219ENST00000557460 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
SRSF5-219ENST00000557460 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
SRSF5-219ENST00000557460 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
SRSF5-219ENST00000557460 NACADO15069 1562 aa16.61■□□□□ 0.25
SRSF5-219ENST00000557460 DCAF8L2P0C7V8 631 aa16.6■□□□□ 0.25
SRSF5-219ENST00000557460 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
SRSF5-219ENST00000557460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
SRSF5-219ENST00000557460 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
SRSF5-219ENST00000557460 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
SRSF5-219ENST00000557460 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
SRSF5-219ENST00000557460 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
SRSF5-219ENST00000557460 APLP2Q06481 763 aa16.34■□□□□ 0.21
SRSF5-219ENST00000557460 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
SRSF5-219ENST00000557460 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
SRSF5-219ENST00000557460 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
SRSF5-219ENST00000557460 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
SRSF5-219ENST00000557460 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
SRSF5-219ENST00000557460 CAPN15O75808 1086 aa16.17■□□□□ 0.18
SRSF5-219ENST00000557460 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
SRSF5-219ENST00000557460 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
SRSF5-219ENST00000557460 UNC13AQ9UPW8 1703 aa16.01■□□□□ 0.15
SRSF5-219ENST00000557460 DSG3P32926 999 aa15.98■□□□□ 0.15
SRSF5-219ENST00000557460 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
SRSF5-219ENST00000557460 ABCB7O75027 752 aa15.87■□□□□ 0.13
SRSF5-219ENST00000557460 POLA2Q14181 598 aa15.87■□□□□ 0.13
SRSF5-219ENST00000557460 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
SRSF5-219ENST00000557460 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
SRSF5-219ENST00000557460 BAZ1AQ9NRL2 1556 aaPredicted RBP15.67■□□□□ 0.1
SRSF5-219ENST00000557460 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
SRSF5-219ENST00000557460 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
SRSF5-219ENST00000557460 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
SRSF5-219ENST00000557460 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
SRSF5-219ENST00000557460 SMARCA4P51532 1647 aa15.59■□□□□ 0.09
SRSF5-219ENST00000557460 SUPT5HO00267 1087 aaKnown RBP15.56■□□□□ 0.08
SRSF5-219ENST00000557460 FBLN2P98095 1184 aa15.53■□□□□ 0.08
SRSF5-219ENST00000557460 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
SRSF5-219ENST00000557460 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
SRSF5-219ENST00000557460 WIZO95785 1651 aa15.42■□□□□ 0.06
SRSF5-219ENST00000557460 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
SRSF5-219ENST00000557460 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
SRSF5-219ENST00000557460 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
SRSF5-219ENST00000557460 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
SRSF5-219ENST00000557460 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
SRSF5-219ENST00000557460 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
SRSF5-219ENST00000557460 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.04
SRSF5-219ENST00000557460 CC2D2AQ9P2K1 1620 aa15.25■□□□□ 0.03
SRSF5-219ENST00000557460 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
SRSF5-219ENST00000557460 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
SRSF5-219ENST00000557460 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
SRSF5-219ENST00000557460 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
SRSF5-219ENST00000557460 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
SRSF5-219ENST00000557460 FKBP8Q14318 412 aa15.18■□□□□ 0.02
SRSF5-219ENST00000557460 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
SRSF5-219ENST00000557460 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
SRSF5-219ENST00000557460 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
SRSF5-219ENST00000557460 PROM2Q8N271 834 aa15.05■□□□□ -0
SRSF5-219ENST00000557460 AKT1S1Q96B36 256 aa15.03■□□□□ -0
SRSF5-219ENST00000557460 CFTRP13569 1480 aa14.95□□□□□ -0.02
SRSF5-219ENST00000557460 CADPSQ9ULU8 1353 aa14.91□□□□□ -0.02
SRSF5-219ENST00000557460 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
SRSF5-219ENST00000557460 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
SRSF5-219ENST00000557460 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
SRSF5-219ENST00000557460 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
SRSF5-219ENST00000557460 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms