RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
KARS-203ENST00000562875 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
KARS-203ENST00000562875 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
KARS-203ENST00000562875 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
KARS-203ENST00000562875 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
KARS-203ENST00000562875 FOXD1Q16676 465 aa21.7■■□□□ 1.06
KARS-203ENST00000562875 ADRA2BP18089 450 aa21.12■□□□□ 0.97
KARS-203ENST00000562875 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
KARS-203ENST00000562875 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
KARS-203ENST00000562875 MSH5O43196 834 aa19.91■□□□□ 0.78
KARS-203ENST00000562875 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
KARS-203ENST00000562875 KCNA4P22459 653 aa19.53■□□□□ 0.72
KARS-203ENST00000562875 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
KARS-203ENST00000562875 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
KARS-203ENST00000562875 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.64
KARS-203ENST00000562875 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
KARS-203ENST00000562875 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
KARS-203ENST00000562875 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
KARS-203ENST00000562875 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
KARS-203ENST00000562875 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
KARS-203ENST00000562875 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
KARS-203ENST00000562875 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
KARS-203ENST00000562875 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
KARS-203ENST00000562875 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
KARS-203ENST00000562875 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
KARS-203ENST00000562875 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
KARS-203ENST00000562875 ZBTB22O15209 634 aa17.97■□□□□ 0.47
KARS-203ENST00000562875 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
KARS-203ENST00000562875 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
KARS-203ENST00000562875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.62■□□□□ 0.411e-7■■□□□ 12.8
KARS-203ENST00000562875 MYCNP04198 464 aaPredicted RBP17.5■□□□□ 0.39
KARS-203ENST00000562875 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
KARS-203ENST00000562875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
KARS-203ENST00000562875 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
KARS-203ENST00000562875 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
KARS-203ENST00000562875 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
KARS-203ENST00000562875 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
KARS-203ENST00000562875 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
KARS-203ENST00000562875 APLP2Q06481 763 aa16.98■□□□□ 0.31
KARS-203ENST00000562875 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
KARS-203ENST00000562875 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
KARS-203ENST00000562875 CAPN15O75808 1086 aa16.73■□□□□ 0.27
KARS-203ENST00000562875 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
KARS-203ENST00000562875 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
KARS-203ENST00000562875 POLA2Q14181 598 aa16.49■□□□□ 0.23
KARS-203ENST00000562875 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
KARS-203ENST00000562875 ABCB7O75027 752 aa16.44■□□□□ 0.22
KARS-203ENST00000562875 FKBP8Q14318 412 aa16.36■□□□□ 0.21
KARS-203ENST00000562875 DSG3P32926 999 aa16.35■□□□□ 0.21
KARS-203ENST00000562875 FBLN2P98095 1184 aa16.29■□□□□ 0.2
KARS-203ENST00000562875 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
KARS-203ENST00000562875 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
KARS-203ENST00000562875 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
KARS-203ENST00000562875 SPDYE4A6NLX3 237 aa16.07■□□□□ 0.16
KARS-203ENST00000562875 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
KARS-203ENST00000562875 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
KARS-203ENST00000562875 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
KARS-203ENST00000562875 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
KARS-203ENST00000562875 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
KARS-203ENST00000562875 PROM2Q8N271 834 aa15.8■□□□□ 0.12
KARS-203ENST00000562875 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
KARS-203ENST00000562875 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
KARS-203ENST00000562875 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
KARS-203ENST00000562875 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
KARS-203ENST00000562875 VASPP50552 380 aaPredicted RBP15.47■□□□□ 0.07
KARS-203ENST00000562875 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
KARS-203ENST00000562875 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
KARS-203ENST00000562875 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
KARS-203ENST00000562875 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
KARS-203ENST00000562875 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
KARS-203ENST00000562875 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
KARS-203ENST00000562875 IFNLR1Q8IU57 520 aaPredicted RBP15.27■□□□□ 0.04
KARS-203ENST00000562875 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
KARS-203ENST00000562875 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
KARS-203ENST00000562875 MIER1Q8N108 512 aa15.22■□□□□ 0.03
KARS-203ENST00000562875 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
KARS-203ENST00000562875 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
KARS-203ENST00000562875 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
KARS-203ENST00000562875 PRR29P0C7W0 189 aa15.12■□□□□ 0.01
KARS-203ENST00000562875 SPOCK2Q92563 424 aa15.06■□□□□ 0
KARS-203ENST00000562875 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
KARS-203ENST00000562875 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
KARS-203ENST00000562875 PKD2Q13563 968 aa14.86□□□□□ -0.03
KARS-203ENST00000562875 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
KARS-203ENST00000562875 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
KARS-203ENST00000562875 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
KARS-203ENST00000562875 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
KARS-203ENST00000562875 NUBP1P53384 320 aa14.78□□□□□ -0.04
KARS-203ENST00000562875 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.057e-7■■■□□ 16.9
KARS-203ENST00000562875 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
KARS-203ENST00000562875 ECM2O94769 699 aaPredicted RBP14.75□□□□□ -0.05
KARS-203ENST00000562875 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
KARS-203ENST00000562875 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.05
KARS-203ENST00000562875 GSE1Q14687 1217 aa14.7□□□□□ -0.06
KARS-203ENST00000562875 DCAF8Q5TAQ9 597 aa14.7□□□□□ -0.06
KARS-203ENST00000562875 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
KARS-203ENST00000562875 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
KARS-203ENST00000562875 POTEHQ6S545 545 aa14.67□□□□□ -0.06
KARS-203ENST00000562875 RASEFQ8IZ41 740 aa14.67□□□□□ -0.06
KARS-203ENST00000562875 FAM212AQ96EL1 285 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms