RNA–Protein interactions for RNA: ENST00000558803.1

ETFA-205, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-205ENST00000558803 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
ETFA-205ENST00000558803 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
ETFA-205ENST00000558803 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
ETFA-205ENST00000558803 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
ETFA-205ENST00000558803 FOXD1Q16676 465 aa17.01■□□□□ 0.31
ETFA-205ENST00000558803 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
ETFA-205ENST00000558803 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
ETFA-205ENST00000558803 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
ETFA-205ENST00000558803 ADRA2BP18089 450 aa15.95■□□□□ 0.14
ETFA-205ENST00000558803 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
ETFA-205ENST00000558803 MSH5O43196 834 aa15.92■□□□□ 0.14
ETFA-205ENST00000558803 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
ETFA-205ENST00000558803 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
ETFA-205ENST00000558803 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
ETFA-205ENST00000558803 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
ETFA-205ENST00000558803 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
ETFA-205ENST00000558803 ABCC9O60706 1549 aa14.42□□□□□ -0.1
ETFA-205ENST00000558803 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
ETFA-205ENST00000558803 CNKSR2Q8WXI2 1034 aa14.06□□□□□ -0.16
ETFA-205ENST00000558803 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
ETFA-205ENST00000558803 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
ETFA-205ENST00000558803 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
ETFA-205ENST00000558803 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
ETFA-205ENST00000558803 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.19
ETFA-205ENST00000558803 NACADO15069 1562 aa13.77□□□□□ -0.21
ETFA-205ENST00000558803 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
ETFA-205ENST00000558803 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
ETFA-205ENST00000558803 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
ETFA-205ENST00000558803 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
ETFA-205ENST00000558803 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
ETFA-205ENST00000558803 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
ETFA-205ENST00000558803 DCAF1Q9Y4B6 1507 aa13.5□□□□□ -0.25
ETFA-205ENST00000558803 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
ETFA-205ENST00000558803 KCNA4P22459 653 aa13.45□□□□□ -0.26
ETFA-205ENST00000558803 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
ETFA-205ENST00000558803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
ETFA-205ENST00000558803 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
ETFA-205ENST00000558803 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
ETFA-205ENST00000558803 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
ETFA-205ENST00000558803 SHROOM4Q9ULL8 1493 aa13.3□□□□□ -0.28
ETFA-205ENST00000558803 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
ETFA-205ENST00000558803 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
ETFA-205ENST00000558803 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
ETFA-205ENST00000558803 CC2D2AQ9P2K1 1620 aa13.05□□□□□ -0.32
ETFA-205ENST00000558803 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
ETFA-205ENST00000558803 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
ETFA-205ENST00000558803 CAPN15O75808 1086 aa12.91□□□□□ -0.34
ETFA-205ENST00000558803 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
ETFA-205ENST00000558803 APLP2Q06481 763 aa12.76□□□□□ -0.37
ETFA-205ENST00000558803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
ETFA-205ENST00000558803 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
ETFA-205ENST00000558803 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
ETFA-205ENST00000558803 TRHP20396 242 aaPredicted RBP12.73□□□□□ -0.37
ETFA-205ENST00000558803 DSG3P32926 999 aa12.73□□□□□ -0.37
ETFA-205ENST00000558803 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
ETFA-205ENST00000558803 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
ETFA-205ENST00000558803 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
ETFA-205ENST00000558803 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
ETFA-205ENST00000558803 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
ETFA-205ENST00000558803 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
ETFA-205ENST00000558803 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
ETFA-205ENST00000558803 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
ETFA-205ENST00000558803 ABCB7O75027 752 aa12.63□□□□□ -0.39
ETFA-205ENST00000558803 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
ETFA-205ENST00000558803 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
ETFA-205ENST00000558803 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
ETFA-205ENST00000558803 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
ETFA-205ENST00000558803 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
ETFA-205ENST00000558803 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
ETFA-205ENST00000558803 CUX2O14529 1486 aa12.43□□□□□ -0.42
ETFA-205ENST00000558803 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
ETFA-205ENST00000558803 NESP48681 1621 aa12.4□□□□□ -0.42
ETFA-205ENST00000558803 WIZO95785 1651 aa12.39□□□□□ -0.43
ETFA-205ENST00000558803 POLA2Q14181 598 aa12.36□□□□□ -0.43
ETFA-205ENST00000558803 ZBTB22O15209 634 aa12.34□□□□□ -0.43
ETFA-205ENST00000558803 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
ETFA-205ENST00000558803 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
ETFA-205ENST00000558803 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
ETFA-205ENST00000558803 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
ETFA-205ENST00000558803 THOC2Q8NI27 1593 aaKnown RBP12.3□□□□□ -0.44
ETFA-205ENST00000558803 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
ETFA-205ENST00000558803 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.44
ETFA-205ENST00000558803 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
ETFA-205ENST00000558803 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
ETFA-205ENST00000558803 CFTRP13569 1480 aa12.2□□□□□ -0.46
ETFA-205ENST00000558803 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
ETFA-205ENST00000558803 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
ETFA-205ENST00000558803 WDR62O43379 1518 aa12.16□□□□□ -0.46
ETFA-205ENST00000558803 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
ETFA-205ENST00000558803 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
ETFA-205ENST00000558803 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
ETFA-205ENST00000558803 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
ETFA-205ENST00000558803 POTEHQ6S545 545 aa12.11□□□□□ -0.47
ETFA-205ENST00000558803 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
ETFA-205ENST00000558803 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
ETFA-205ENST00000558803 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
ETFA-205ENST00000558803 ABCC8Q09428 1581 aa11.98□□□□□ -0.49
ETFA-205ENST00000558803 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
ETFA-205ENST00000558803 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
ETFA-205ENST00000558803 DNMBPQ6XZF7 1577 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms