RNA–Protein interactions for RNA: ENST00000611074.4

RAVER1-206, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RAVER1, Length 3,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-206ENST00000611074 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
RAVER1-206ENST00000611074 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
RAVER1-206ENST00000611074 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
RAVER1-206ENST00000611074 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.29
RAVER1-206ENST00000611074 HRCP23327 699 aa23.1■■□□□ 1.29
RAVER1-206ENST00000611074 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
RAVER1-206ENST00000611074 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
RAVER1-206ENST00000611074 PPARGC1BQ86YN6 1023 aaKnown RBP22.8■■□□□ 1.24
RAVER1-206ENST00000611074 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
RAVER1-206ENST00000611074 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.21
RAVER1-206ENST00000611074 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
RAVER1-206ENST00000611074 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
RAVER1-206ENST00000611074 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
RAVER1-206ENST00000611074 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
RAVER1-206ENST00000611074 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
RAVER1-206ENST00000611074 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
RAVER1-206ENST00000611074 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
RAVER1-206ENST00000611074 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
RAVER1-206ENST00000611074 PELP1Q8IZL8 1130 aaKnown RBP21.75■■□□□ 1.07
RAVER1-206ENST00000611074 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
RAVER1-206ENST00000611074 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
RAVER1-206ENST00000611074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
RAVER1-206ENST00000611074 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
RAVER1-206ENST00000611074 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
RAVER1-206ENST00000611074 ABCC9O60706 1549 aa21.34■■□□□ 1.01
RAVER1-206ENST00000611074 SCRIBQ14160 1630 aa21.33■■□□□ 1.01
RAVER1-206ENST00000611074 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
RAVER1-206ENST00000611074 NEUROD1Q13562 356 aa21.28■■□□□ 1
RAVER1-206ENST00000611074 CENPBP07199 599 aaPredicted RBP21.26■□□□□ 0.99
RAVER1-206ENST00000611074 DIEXFQ68CQ4 756 aaKnown RBP21.25■□□□□ 0.99
RAVER1-206ENST00000611074 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
RAVER1-206ENST00000611074 GTF3C3Q9Y5Q9 886 aa21.22■□□□□ 0.99
RAVER1-206ENST00000611074 YTHDC1Q96MU7 727 aaKnown RBP21.1■□□□□ 0.97
RAVER1-206ENST00000611074 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.96
RAVER1-206ENST00000611074 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
RAVER1-206ENST00000611074 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
RAVER1-206ENST00000611074 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
RAVER1-206ENST00000611074 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
RAVER1-206ENST00000611074 MYT1Q01538 1121 aa20.77■□□□□ 0.92
RAVER1-206ENST00000611074 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
RAVER1-206ENST00000611074 WIZO95785 1651 aa20.74■□□□□ 0.91
RAVER1-206ENST00000611074 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
RAVER1-206ENST00000611074 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
RAVER1-206ENST00000611074 MIER1Q8N108 512 aa20.7■□□□□ 0.9
RAVER1-206ENST00000611074 APLP2Q06481 763 aa20.67■□□□□ 0.9
RAVER1-206ENST00000611074 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
RAVER1-206ENST00000611074 SOGA1O94964 1423 aa20.64■□□□□ 0.89
RAVER1-206ENST00000611074 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
RAVER1-206ENST00000611074 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.89
RAVER1-206ENST00000611074 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
RAVER1-206ENST00000611074 NACADO15069 1562 aa20.55■□□□□ 0.88
RAVER1-206ENST00000611074 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
RAVER1-206ENST00000611074 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
RAVER1-206ENST00000611074 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
RAVER1-206ENST00000611074 EEA1Q15075 1411 aa20.37■□□□□ 0.85
RAVER1-206ENST00000611074 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
RAVER1-206ENST00000611074 CLIP1P30622 1438 aa20.32■□□□□ 0.84
RAVER1-206ENST00000611074 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
RAVER1-206ENST00000611074 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
RAVER1-206ENST00000611074 ITGAEP38570 1179 aa20.24■□□□□ 0.83
RAVER1-206ENST00000611074 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
RAVER1-206ENST00000611074 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
RAVER1-206ENST00000611074 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
RAVER1-206ENST00000611074 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
RAVER1-206ENST00000611074 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
RAVER1-206ENST00000611074 BCANQ96GW7 911 aa20.11■□□□□ 0.81
RAVER1-206ENST00000611074 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
RAVER1-206ENST00000611074 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
RAVER1-206ENST00000611074 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
RAVER1-206ENST00000611074 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
RAVER1-206ENST00000611074 TSHZ2Q9NRE2 1034 aa19.96■□□□□ 0.79
RAVER1-206ENST00000611074 KCNH8Q96L42 1107 aa19.95■□□□□ 0.78
RAVER1-206ENST00000611074 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
RAVER1-206ENST00000611074 FKBP8Q14318 412 aa19.9■□□□□ 0.78
RAVER1-206ENST00000611074 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
RAVER1-206ENST00000611074 KIF21BO75037 1637 aa19.89■□□□□ 0.78
RAVER1-206ENST00000611074 NEFLP07196 543 aa19.89■□□□□ 0.77
RAVER1-206ENST00000611074 ATP1B4Q9UN42 357 aaPredicted RBP19.89■□□□□ 0.77
RAVER1-206ENST00000611074 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
RAVER1-206ENST00000611074 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
RAVER1-206ENST00000611074 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
RAVER1-206ENST00000611074 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
RAVER1-206ENST00000611074 CCNB3Q8WWL7 1395 aa19.78■□□□□ 0.76
RAVER1-206ENST00000611074 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
RAVER1-206ENST00000611074 SIN3AQ96ST3 1273 aa19.76■□□□□ 0.75
RAVER1-206ENST00000611074 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
RAVER1-206ENST00000611074 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
RAVER1-206ENST00000611074 ARAP1Q96P48 1450 aa19.68■□□□□ 0.74
RAVER1-206ENST00000611074 ANP32CO43423 234 aa19.68■□□□□ 0.74
RAVER1-206ENST00000611074 P3H3Q8IVL6 736 aa19.68■□□□□ 0.74
RAVER1-206ENST00000611074 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
RAVER1-206ENST00000611074 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
RAVER1-206ENST00000611074 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
RAVER1-206ENST00000611074 RBM19Q9Y4C8 960 aaKnown RBP19.59■□□□□ 0.73
RAVER1-206ENST00000611074 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
RAVER1-206ENST00000611074 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
RAVER1-206ENST00000611074 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
RAVER1-206ENST00000611074 ERICH6Q7L0X2 663 aa19.55■□□□□ 0.72
RAVER1-206ENST00000611074 IRX6P78412 446 aaPredicted RBP19.53■□□□□ 0.72
RAVER1-206ENST00000611074 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms