RNA–Protein interactions for RNA: ENST00000615032.4

RAVER1-207, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAVER1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-207ENST00000615032 NISCHQ9Y2I1 1504 aa38.81■■■■□ 3.8
RAVER1-207ENST00000615032 CCDC180Q9P1Z9 1646 aa33.3■■■□□ 2.92
RAVER1-207ENST00000615032 ZCCHC6Q5VYS8 1495 aaKnown RBP32.82■■■□□ 2.84
RAVER1-207ENST00000615032 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
RAVER1-207ENST00000615032 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
RAVER1-207ENST00000615032 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
RAVER1-207ENST00000615032 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.66
RAVER1-207ENST00000615032 MYO15BQ96JP2 1530 aa31.27■■■□□ 2.6
RAVER1-207ENST00000615032 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
RAVER1-207ENST00000615032 ABCC9O60706 1549 aa30.93■■■□□ 2.54
RAVER1-207ENST00000615032 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
RAVER1-207ENST00000615032 NACADO15069 1562 aa30.75■■■□□ 2.51
RAVER1-207ENST00000615032 RSF1Q96T23 1441 aaPredicted RBP30.55■■■□□ 2.48
RAVER1-207ENST00000615032 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
RAVER1-207ENST00000615032 CECR2Q9BXF3 1484 aa30.09■■■□□ 2.41
RAVER1-207ENST00000615032 MROH2BQ7Z745 1585 aa30.04■■■□□ 2.4
RAVER1-207ENST00000615032 LOC105371045A0A1W2PR82 267 aa29.91■■■□□ 2.38
RAVER1-207ENST00000615032 WIZO95785 1651 aa29.87■■■□□ 2.37
RAVER1-207ENST00000615032 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
RAVER1-207ENST00000615032 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
RAVER1-207ENST00000615032 HRCP23327 699 aa29.79■■■□□ 2.36
RAVER1-207ENST00000615032 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
RAVER1-207ENST00000615032 PCGF6Q9BYE7 350 aa29.71■■■□□ 2.35
RAVER1-207ENST00000615032 SMARCA4P51532 1647 aa29.6■■■□□ 2.33
RAVER1-207ENST00000615032 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
RAVER1-207ENST00000615032 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
RAVER1-207ENST00000615032 TRIM26Q12899 539 aaPredicted RBP29.43■■■□□ 2.3
RAVER1-207ENST00000615032 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
RAVER1-207ENST00000615032 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
RAVER1-207ENST00000615032 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
RAVER1-207ENST00000615032 FAM9AQ8IZU1 332 aaPredicted RBP29.29■■■□□ 2.28
RAVER1-207ENST00000615032 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
RAVER1-207ENST00000615032 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
RAVER1-207ENST00000615032 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
RAVER1-207ENST00000615032 PPARGC1BQ86YN6 1023 aaKnown RBP28.9■■■□□ 2.22
RAVER1-207ENST00000615032 EEA1Q15075 1411 aa28.88■■■□□ 2.21
RAVER1-207ENST00000615032 ZEB1P37275 1124 aaPredicted RBP28.84■■■□□ 2.21
RAVER1-207ENST00000615032 EHMT2Q96KQ7 1210 aa28.83■■■□□ 2.21
RAVER1-207ENST00000615032 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
RAVER1-207ENST00000615032 SOGA1O94964 1423 aa28.73■■■□□ 2.19
RAVER1-207ENST00000615032 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
RAVER1-207ENST00000615032 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
RAVER1-207ENST00000615032 TNIKQ9UKE5 1360 aa28.68■■■□□ 2.18
RAVER1-207ENST00000615032 CSRNP3Q8WYN3 585 aa28.64■■■□□ 2.17
RAVER1-207ENST00000615032 CEP162Q5TB80 1403 aa28.59■■■□□ 2.17
RAVER1-207ENST00000615032 RUSC2Q8N2Y8 1516 aa28.57■■■□□ 2.16
RAVER1-207ENST00000615032 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
RAVER1-207ENST00000615032 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
RAVER1-207ENST00000615032 KIF21BO75037 1637 aa28.46■■■□□ 2.15
RAVER1-207ENST00000615032 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
RAVER1-207ENST00000615032 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
RAVER1-207ENST00000615032 NCAPD3P42695 1498 aa28.39■■■□□ 2.14
RAVER1-207ENST00000615032 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
RAVER1-207ENST00000615032 TOP2BQ02880 1626 aa28.35■■■□□ 2.13
RAVER1-207ENST00000615032 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
RAVER1-207ENST00000615032 CLIP1P30622 1438 aa28.12■■■□□ 2.09
RAVER1-207ENST00000615032 RAPGEF2Q9Y4G8 1499 aa28.09■■■□□ 2.09
RAVER1-207ENST00000615032 CFTRP13569 1480 aa28.07■■■□□ 2.08
RAVER1-207ENST00000615032 CCER1Q8TC90 406 aaPredicted RBP28.06■■■□□ 2.08
RAVER1-207ENST00000615032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
RAVER1-207ENST00000615032 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
RAVER1-207ENST00000615032 VPS8Q8N3P4 1428 aa28.04■■■□□ 2.08
RAVER1-207ENST00000615032 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
RAVER1-207ENST00000615032 CUX1P39880 1505 aa28.01■■■□□ 2.07
RAVER1-207ENST00000615032 PRXQ9BXM0 1461 aa27.99■■■□□ 2.07
RAVER1-207ENST00000615032 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
RAVER1-207ENST00000615032 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
RAVER1-207ENST00000615032 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
RAVER1-207ENST00000615032 APLP2Q06481 763 aa27.77■■■□□ 2.04
RAVER1-207ENST00000615032 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
RAVER1-207ENST00000615032 ARAP1Q96P48 1450 aa27.71■■■□□ 2.03
RAVER1-207ENST00000615032 CUX2O14529 1486 aa27.55■■■□□ 2
RAVER1-207ENST00000615032 RANGAP1P46060 587 aaPredicted RBP27.55■■■□□ 2
RAVER1-207ENST00000615032 IGF1RP08069 1367 aa27.54■■■□□ 2
RAVER1-207ENST00000615032 HNRNPUL2Q1KMD3 747 aaKnown RBP27.53■■■□□ 2
RAVER1-207ENST00000615032 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
RAVER1-207ENST00000615032 ARHGAP35Q9NRY4 1499 aa27.51■■□□□ 1.99
RAVER1-207ENST00000615032 DIEXFQ68CQ4 756 aaKnown RBP27.44■■□□□ 1.98
RAVER1-207ENST00000615032 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
RAVER1-207ENST00000615032 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
RAVER1-207ENST00000615032 RRBP1Q9P2E9 1410 aaKnown RBP27.4■■□□□ 1.98
RAVER1-207ENST00000615032 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
RAVER1-207ENST00000615032 ZNF316A6NFI3 1004 aaPredicted RBP27.38■■□□□ 1.97
RAVER1-207ENST00000615032 MAP3K1Q13233 1512 aa27.38■■□□□ 1.97
RAVER1-207ENST00000615032 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
RAVER1-207ENST00000615032 CLSPNQ9HAW4 1339 aa27.36■■□□□ 1.97
RAVER1-207ENST00000615032 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
RAVER1-207ENST00000615032 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
RAVER1-207ENST00000615032 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
RAVER1-207ENST00000615032 TIAM1Q13009 1591 aa27.24■■□□□ 1.95
RAVER1-207ENST00000615032 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
RAVER1-207ENST00000615032 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
RAVER1-207ENST00000615032 CUL7Q14999 1698 aa27.21■■□□□ 1.95
RAVER1-207ENST00000615032 CCNB3Q8WWL7 1395 aa27.21■■□□□ 1.95
RAVER1-207ENST00000615032 DHX57Q6P158 1386 aaKnown RBP27.2■■□□□ 1.95
RAVER1-207ENST00000615032 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
RAVER1-207ENST00000615032 SCAF1Q9H7N4 1312 aaKnown RBP27.18■■□□□ 1.94
RAVER1-207ENST00000615032 NESP48681 1621 aa27.16■■□□□ 1.94
RAVER1-207ENST00000615032 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
RAVER1-207ENST00000615032 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 341.9 ms