RNA–Protein interactions for RNA: ENST00000560566.5

CLU-217, Transcript of clusterin, humanhuman

TSL 4

Gene CLU, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-217ENST00000560566 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
CLU-217ENST00000560566 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
CLU-217ENST00000560566 ABCC9O60706 1549 aa27.92■■■□□ 2.06
CLU-217ENST00000560566 ZCCHC6Q5VYS8 1495 aaKnown RBP27.05■■□□□ 1.92
CLU-217ENST00000560566 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
CLU-217ENST00000560566 NACADO15069 1562 aa27■■□□□ 1.91
CLU-217ENST00000560566 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.9
CLU-217ENST00000560566 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.9
CLU-217ENST00000560566 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
CLU-217ENST00000560566 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
CLU-217ENST00000560566 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
CLU-217ENST00000560566 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
CLU-217ENST00000560566 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
CLU-217ENST00000560566 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
CLU-217ENST00000560566 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
CLU-217ENST00000560566 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
CLU-217ENST00000560566 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
CLU-217ENST00000560566 CECR2Q9BXF3 1484 aa25.22■■□□□ 1.63
CLU-217ENST00000560566 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
CLU-217ENST00000560566 SMARCA4P51532 1647 aa25.08■■□□□ 1.6
CLU-217ENST00000560566 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
CLU-217ENST00000560566 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
CLU-217ENST00000560566 NCAPD3P42695 1498 aa24.95■■□□□ 1.58
CLU-217ENST00000560566 SMARCA2P51531 1590 aa24.92■■□□□ 1.58
CLU-217ENST00000560566 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
CLU-217ENST00000560566 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
CLU-217ENST00000560566 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
CLU-217ENST00000560566 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
CLU-217ENST00000560566 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
CLU-217ENST00000560566 WIZO95785 1651 aa24.66■■□□□ 1.54
CLU-217ENST00000560566 TOP2AP11388 1531 aaKnown RBP24.46■■□□□ 1.51
CLU-217ENST00000560566 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
CLU-217ENST00000560566 CADPSQ9ULU8 1353 aa24.23■■□□□ 1.47
CLU-217ENST00000560566 NESP48681 1621 aa24.21■■□□□ 1.47
CLU-217ENST00000560566 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.47
CLU-217ENST00000560566 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
CLU-217ENST00000560566 CFTRP13569 1480 aa24.11■■□□□ 1.45
CLU-217ENST00000560566 PDS5BQ9NTI5 1447 aa24.09■■□□□ 1.45
CLU-217ENST00000560566 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
CLU-217ENST00000560566 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
CLU-217ENST00000560566 KIF21AQ7Z4S6 1674 aa23.86■■□□□ 1.41
CLU-217ENST00000560566 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
CLU-217ENST00000560566 MRC2Q9UBG0 1479 aa23.79■■□□□ 1.4
CLU-217ENST00000560566 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
CLU-217ENST00000560566 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
CLU-217ENST00000560566 CUX2O14529 1486 aa23.78■■□□□ 1.4
CLU-217ENST00000560566 WDR62O43379 1518 aa23.69■■□□□ 1.38
CLU-217ENST00000560566 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.38
CLU-217ENST00000560566 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
CLU-217ENST00000560566 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
CLU-217ENST00000560566 DNMBPQ6XZF7 1577 aa23.51■■□□□ 1.35
CLU-217ENST00000560566 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
CLU-217ENST00000560566 CUX1P39880 1505 aa23.41■■□□□ 1.34
CLU-217ENST00000560566 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
CLU-217ENST00000560566 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
CLU-217ENST00000560566 POLA1P09884 1462 aaPredicted RBP23.35■■□□□ 1.33
CLU-217ENST00000560566 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
CLU-217ENST00000560566 SOGA1O94964 1423 aa23.29■■□□□ 1.32
CLU-217ENST00000560566 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
CLU-217ENST00000560566 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
CLU-217ENST00000560566 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
CLU-217ENST00000560566 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
CLU-217ENST00000560566 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
CLU-217ENST00000560566 ZNF608Q9ULD9 1512 aaPredicted RBP23.21■■□□□ 1.31
CLU-217ENST00000560566 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
CLU-217ENST00000560566 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.293e-11■□□□□ 9.4
CLU-217ENST00000560566 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
CLU-217ENST00000560566 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
CLU-217ENST00000560566 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
CLU-217ENST00000560566 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
CLU-217ENST00000560566 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
CLU-217ENST00000560566 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
CLU-217ENST00000560566 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
CLU-217ENST00000560566 MAGI1Q96QZ7 1491 aaPredicted RBP22.91■■□□□ 1.26
CLU-217ENST00000560566 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
CLU-217ENST00000560566 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
CLU-217ENST00000560566 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
CLU-217ENST00000560566 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
CLU-217ENST00000560566 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
CLU-217ENST00000560566 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
CLU-217ENST00000560566 SYNJ2O15056 1496 aa22.81■■□□□ 1.24
CLU-217ENST00000560566 FBLN2P98095 1184 aa22.81■■□□□ 1.24
CLU-217ENST00000560566 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
CLU-217ENST00000560566 IGF1RP08069 1367 aa22.78■■□□□ 1.24
CLU-217ENST00000560566 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
CLU-217ENST00000560566 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
CLU-217ENST00000560566 CHD1O14646 1710 aa22.71■■□□□ 1.23
CLU-217ENST00000560566 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
CLU-217ENST00000560566 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
CLU-217ENST00000560566 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
CLU-217ENST00000560566 CUL7Q14999 1698 aa22.62■■□□□ 1.21
CLU-217ENST00000560566 NUP160Q12769 1436 aa22.59■■□□□ 1.21
CLU-217ENST00000560566 EEA1Q15075 1411 aa22.58■■□□□ 1.21
CLU-217ENST00000560566 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
CLU-217ENST00000560566 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
CLU-217ENST00000560566 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
CLU-217ENST00000560566 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
CLU-217ENST00000560566 PRXQ9BXM0 1461 aa22.48■■□□□ 1.19
CLU-217ENST00000560566 ARHGEF11O15085 1522 aa22.42■■□□□ 1.18
CLU-217ENST00000560566 KIAA0586Q9BVV6 1533 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms