RNA–Protein interactions for RNA: ENST00000557435.1

SRSF5-218, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-218ENST00000557435 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
SRSF5-218ENST00000557435 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
SRSF5-218ENST00000557435 CCDC180Q9P1Z9 1646 aa20.1■□□□□ 0.81
SRSF5-218ENST00000557435 CHIC1Q5VXU3 224 aa19.93■□□□□ 0.78
SRSF5-218ENST00000557435 ABCC9O60706 1549 aa19.56■□□□□ 0.72
SRSF5-218ENST00000557435 NACADO15069 1562 aa18.91■□□□□ 0.62
SRSF5-218ENST00000557435 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
SRSF5-218ENST00000557435 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
SRSF5-218ENST00000557435 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
SRSF5-218ENST00000557435 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
SRSF5-218ENST00000557435 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
SRSF5-218ENST00000557435 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
SRSF5-218ENST00000557435 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
SRSF5-218ENST00000557435 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
SRSF5-218ENST00000557435 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
SRSF5-218ENST00000557435 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
SRSF5-218ENST00000557435 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
SRSF5-218ENST00000557435 EIF4G1Q04637 1599 aaKnown RBP17.82■□□□□ 0.44
SRSF5-218ENST00000557435 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
SRSF5-218ENST00000557435 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
SRSF5-218ENST00000557435 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
SRSF5-218ENST00000557435 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
SRSF5-218ENST00000557435 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
SRSF5-218ENST00000557435 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
SRSF5-218ENST00000557435 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
SRSF5-218ENST00000557435 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
SRSF5-218ENST00000557435 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
SRSF5-218ENST00000557435 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
SRSF5-218ENST00000557435 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
SRSF5-218ENST00000557435 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
SRSF5-218ENST00000557435 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
SRSF5-218ENST00000557435 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
SRSF5-218ENST00000557435 WIZO95785 1651 aa17.25■□□□□ 0.35
SRSF5-218ENST00000557435 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
SRSF5-218ENST00000557435 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
SRSF5-218ENST00000557435 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
SRSF5-218ENST00000557435 NESP48681 1621 aa16.96■□□□□ 0.3
SRSF5-218ENST00000557435 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
SRSF5-218ENST00000557435 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
SRSF5-218ENST00000557435 CFTRP13569 1480 aa16.87■□□□□ 0.29
SRSF5-218ENST00000557435 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
SRSF5-218ENST00000557435 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
SRSF5-218ENST00000557435 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
SRSF5-218ENST00000557435 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
SRSF5-218ENST00000557435 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
SRSF5-218ENST00000557435 CUX2O14529 1486 aa16.68■□□□□ 0.26
SRSF5-218ENST00000557435 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
SRSF5-218ENST00000557435 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
SRSF5-218ENST00000557435 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
SRSF5-218ENST00000557435 WDR62O43379 1518 aa16.6■□□□□ 0.25
SRSF5-218ENST00000557435 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
SRSF5-218ENST00000557435 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
SRSF5-218ENST00000557435 TOPBP1Q92547 1522 aa16.46■□□□□ 0.23
SRSF5-218ENST00000557435 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
SRSF5-218ENST00000557435 CUX1P39880 1505 aa16.36■□□□□ 0.21
SRSF5-218ENST00000557435 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
SRSF5-218ENST00000557435 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
SRSF5-218ENST00000557435 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
SRSF5-218ENST00000557435 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
SRSF5-218ENST00000557435 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
SRSF5-218ENST00000557435 SOGA1O94964 1423 aa16.28■□□□□ 0.2
SRSF5-218ENST00000557435 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
SRSF5-218ENST00000557435 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
SRSF5-218ENST00000557435 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
SRSF5-218ENST00000557435 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
SRSF5-218ENST00000557435 FOXD1Q16676 465 aa16.24■□□□□ 0.19
SRSF5-218ENST00000557435 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
SRSF5-218ENST00000557435 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.181e-14■■■■■ 42.8
SRSF5-218ENST00000557435 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
SRSF5-218ENST00000557435 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
SRSF5-218ENST00000557435 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
SRSF5-218ENST00000557435 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
SRSF5-218ENST00000557435 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
SRSF5-218ENST00000557435 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
SRSF5-218ENST00000557435 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
SRSF5-218ENST00000557435 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
SRSF5-218ENST00000557435 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
SRSF5-218ENST00000557435 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
SRSF5-218ENST00000557435 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
SRSF5-218ENST00000557435 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
SRSF5-218ENST00000557435 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
SRSF5-218ENST00000557435 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
SRSF5-218ENST00000557435 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
SRSF5-218ENST00000557435 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
SRSF5-218ENST00000557435 SYNJ2O15056 1496 aa15.96■□□□□ 0.14
SRSF5-218ENST00000557435 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
SRSF5-218ENST00000557435 FBLN2P98095 1184 aa15.94■□□□□ 0.14
SRSF5-218ENST00000557435 CHD1O14646 1710 aa15.94■□□□□ 0.14
SRSF5-218ENST00000557435 IGF1RP08069 1367 aa15.93■□□□□ 0.14
SRSF5-218ENST00000557435 FHAD1B1AJZ9 1412 aa15.92■□□□□ 0.14
SRSF5-218ENST00000557435 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
SRSF5-218ENST00000557435 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
SRSF5-218ENST00000557435 RUSC2Q8N2Y8 1516 aa15.83■□□□□ 0.12
SRSF5-218ENST00000557435 CUL7Q14999 1698 aa15.82■□□□□ 0.12
SRSF5-218ENST00000557435 NUP160Q12769 1436 aa15.81■□□□□ 0.12
SRSF5-218ENST00000557435 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
SRSF5-218ENST00000557435 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
SRSF5-218ENST00000557435 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
SRSF5-218ENST00000557435 EEA1Q15075 1411 aa15.73■□□□□ 0.11
SRSF5-218ENST00000557435 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms