RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 NISCHQ9Y2I1 1504 aa45.53■■■■■ 4.88
AGRN-208ENST00000479707 CCDC180Q9P1Z9 1646 aa40.38■■■■■ 4.06
AGRN-208ENST00000479707 ABCC9O60706 1549 aa39.58■■■■□ 3.93
AGRN-208ENST00000479707 DCAF8L2P0C7V8 631 aa38.23■■■■□ 3.71
AGRN-208ENST00000479707 RB1CC1Q8TDY2 1594 aa38.02■■■■□ 3.68
AGRN-208ENST00000479707 NACADO15069 1562 aa37.96■■■■□ 3.67
AGRN-208ENST00000479707 ZCCHC6Q5VYS8 1495 aaKnown RBP37.92■■■■□ 3.66
AGRN-208ENST00000479707 MYO15BQ96JP2 1530 aa37.68■■■■□ 3.62
AGRN-208ENST00000479707 DCAF1Q9Y4B6 1507 aa37.58■■■■□ 3.61
AGRN-208ENST00000479707 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
AGRN-208ENST00000479707 PABPN1Q86U42 306 aaKnown RBP eCLIP37.06■■■■□ 3.52
AGRN-208ENST00000479707 SCRIBQ14160 1630 aa36.98■■■■□ 3.51
AGRN-208ENST00000479707 BICRAQ9NZM4 1560 aa36.87■■■■□ 3.49
AGRN-208ENST00000479707 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
AGRN-208ENST00000479707 DNAJC5BQ9UF47 199 aa36.28■■■■□ 3.4
AGRN-208ENST00000479707 EIF4G1Q04637 1599 aaKnown RBP35.89■■■■□ 3.34
AGRN-208ENST00000479707 CC2D2AQ9P2K1 1620 aa35.76■■■■□ 3.32
AGRN-208ENST00000479707 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
AGRN-208ENST00000479707 SMARCA4P51532 1647 aa35.32■■■■□ 3.24
AGRN-208ENST00000479707 BAZ1AQ9NRL2 1556 aaPredicted RBP35.27■■■■□ 3.24
AGRN-208ENST00000479707 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
AGRN-208ENST00000479707 ATAD2BQ9ULI0 1458 aa35.1■■■■□ 3.21
AGRN-208ENST00000479707 NCAPD3P42695 1498 aa35.03■■■■□ 3.2
AGRN-208ENST00000479707 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
AGRN-208ENST00000479707 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
AGRN-208ENST00000479707 HMGXB3Q12766 1538 aa34.85■■■■□ 3.17
AGRN-208ENST00000479707 BAZ1BQ9UIG0 1483 aaKnown RBP34.84■■■■□ 3.17
AGRN-208ENST00000479707 WIZO95785 1651 aa34.79■■■■□ 3.16
AGRN-208ENST00000479707 RSF1Q96T23 1441 aaPredicted RBP34.74■■■■□ 3.15
AGRN-208ENST00000479707 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
AGRN-208ENST00000479707 NESP48681 1621 aa34.28■■■■□ 3.08
AGRN-208ENST00000479707 SUPT5HO00267 1087 aaKnown RBP34.1■■■■□ 3.05
AGRN-208ENST00000479707 LAMC3Q9Y6N6 1575 aa34.1■■■■□ 3.05
AGRN-208ENST00000479707 ERCC6Q03468 1493 aa34.08■■■■□ 3.05
AGRN-208ENST00000479707 CADPSQ9ULU8 1353 aa34.06■■■■□ 3.04
AGRN-208ENST00000479707 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.03
AGRN-208ENST00000479707 PDS5BQ9NTI5 1447 aa33.89■■■■□ 3.02
AGRN-208ENST00000479707 KIF21AQ7Z4S6 1674 aa33.85■■■■□ 3.01
AGRN-208ENST00000479707 CFTRP13569 1480 aa33.84■■■■□ 3.01
AGRN-208ENST00000479707 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
AGRN-208ENST00000479707 THOC2Q8NI27 1593 aaKnown RBP33.65■■■□□ 2.98
AGRN-208ENST00000479707 CEP164Q9UPV0 1460 aa33.62■■■□□ 2.97
AGRN-208ENST00000479707 PRDM2Q13029 1718 aa33.62■■■□□ 2.97
AGRN-208ENST00000479707 CUX2O14529 1486 aa33.6■■■□□ 2.97
AGRN-208ENST00000479707 MRC2Q9UBG0 1479 aa33.54■■■□□ 2.96
AGRN-208ENST00000479707 WDR62O43379 1518 aa33.4■■■□□ 2.94
AGRN-208ENST00000479707 URB2Q14146 1524 aaKnown RBP33.34■■■□□ 2.93
AGRN-208ENST00000479707 TOPBP1Q92547 1522 aa33.15■■■□□ 2.9
AGRN-208ENST00000479707 ABCC8Q09428 1581 aa33.1■■■□□ 2.89
AGRN-208ENST00000479707 DNMBPQ6XZF7 1577 aa33.09■■■□□ 2.89
AGRN-208ENST00000479707 CUX1P39880 1505 aa32.94■■■□□ 2.86
AGRN-208ENST00000479707 IFT140Q96RY7 1462 aa32.89■■■□□ 2.86
AGRN-208ENST00000479707 POLA1P09884 1462 aaPredicted RBP32.87■■■□□ 2.85
AGRN-208ENST00000479707 FGD5Q6ZNL6 1462 aa32.83■■■□□ 2.85
AGRN-208ENST00000479707 ZNF608Q9ULD9 1512 aaPredicted RBP32.8■■■□□ 2.84
AGRN-208ENST00000479707 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
AGRN-208ENST00000479707 SOGA1O94964 1423 aa32.77■■■□□ 2.84
AGRN-208ENST00000479707 TARBP1Q13395 1621 aaKnown RBP32.77■■■□□ 2.84
AGRN-208ENST00000479707 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
AGRN-208ENST00000479707 SYNJ1O43426 1573 aa32.7■■■□□ 2.82
AGRN-208ENST00000479707 TOP2BQ02880 1626 aa32.66■■■□□ 2.82
AGRN-208ENST00000479707 AQRO60306 1485 aaKnown RBP eCLIP32.65■■■□□ 2.821e-17■■■■■ 42.6
AGRN-208ENST00000479707 BIVM-ERCC5R4GMW8 1640 aa32.65■■■□□ 2.82
AGRN-208ENST00000479707 EIF4G3O43432 1585 aaKnown RBP32.64■■■□□ 2.82
AGRN-208ENST00000479707 TDRD9Q8NDG6 1382 aaKnown RBP32.61■■■□□ 2.81
AGRN-208ENST00000479707 DNAJC5Q9H3Z4 198 aa32.54■■■□□ 2.8
AGRN-208ENST00000479707 WDR97A6NE52 1622 aa32.51■■■□□ 2.79
AGRN-208ENST00000479707 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
AGRN-208ENST00000479707 GAPVD1Q14C86 1478 aa32.37■■■□□ 2.77
AGRN-208ENST00000479707 GRIN2BQ13224 1484 aa32.34■■■□□ 2.77
AGRN-208ENST00000479707 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
AGRN-208ENST00000479707 FBLN2P98095 1184 aa32.32■■■□□ 2.76
AGRN-208ENST00000479707 OSCARQ8IYS5 282 aa32.32■■■□□ 2.76
AGRN-208ENST00000479707 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
AGRN-208ENST00000479707 SNAPC4Q5SXM2 1469 aa32.31■■■□□ 2.76
AGRN-208ENST00000479707 CHD1O14646 1710 aa32.26■■■□□ 2.75
AGRN-208ENST00000479707 MAGI1Q96QZ7 1491 aaPredicted RBP32.21■■■□□ 2.75
AGRN-208ENST00000479707 CHMP7Q8WUX9 453 aaPredicted RBP32.18■■■□□ 2.74
AGRN-208ENST00000479707 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
AGRN-208ENST00000479707 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
AGRN-208ENST00000479707 ERICH3Q5RHP9 1530 aa32.07■■■□□ 2.72
AGRN-208ENST00000479707 KIF27Q86VH2 1401 aa32.06■■■□□ 2.72
AGRN-208ENST00000479707 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
AGRN-208ENST00000479707 FHAD1B1AJZ9 1412 aa31.98■■■□□ 2.71
AGRN-208ENST00000479707 IGF1RP08069 1367 aa31.94■■■□□ 2.7
AGRN-208ENST00000479707 GRIN2AQ12879 1464 aa31.92■■■□□ 2.7
AGRN-208ENST00000479707 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
AGRN-208ENST00000479707 CLASP1Q7Z460 1538 aa31.83■■■□□ 2.69
AGRN-208ENST00000479707 CUL7Q14999 1698 aa31.81■■■□□ 2.68
AGRN-208ENST00000479707 CHIC1Q5VXU3 224 aa31.81■■■□□ 2.68
AGRN-208ENST00000479707 CEP170Q5SW79 1584 aa31.78■■■□□ 2.68
AGRN-208ENST00000479707 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
AGRN-208ENST00000479707 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
AGRN-208ENST00000479707 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
AGRN-208ENST00000479707 CARMIL1Q5VZK9 1371 aa31.77■■■□□ 2.68
AGRN-208ENST00000479707 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
AGRN-208ENST00000479707 NUP160Q12769 1436 aa31.75■■■□□ 2.67
AGRN-208ENST00000479707 FAM9AQ8IZU1 332 aaPredicted RBP31.57■■■□□ 2.64
AGRN-208ENST00000479707 RAPGEF2Q9Y4G8 1499 aa31.57■■■□□ 2.64
AGRN-208ENST00000479707 CYB5RLQ6IPT4 315 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms