RNA–Protein interactions for RNA: ENST00000553548.5

SRSF5-204, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-204ENST00000553548 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
SRSF5-204ENST00000553548 CCDC180Q9P1Z9 1646 aa20.77■□□□□ 0.92
SRSF5-204ENST00000553548 ABCC9O60706 1549 aa20.14■□□□□ 0.81
SRSF5-204ENST00000553548 ZCCHC6Q5VYS8 1495 aaKnown RBP19.68■□□□□ 0.74
SRSF5-204ENST00000553548 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
SRSF5-204ENST00000553548 NACADO15069 1562 aa19.49■□□□□ 0.71
SRSF5-204ENST00000553548 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
SRSF5-204ENST00000553548 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
SRSF5-204ENST00000553548 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
SRSF5-204ENST00000553548 UNC13AQ9UPW8 1703 aa19.04■□□□□ 0.64
SRSF5-204ENST00000553548 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
SRSF5-204ENST00000553548 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
SRSF5-204ENST00000553548 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
SRSF5-204ENST00000553548 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
SRSF5-204ENST00000553548 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
SRSF5-204ENST00000553548 EIF4G1Q04637 1599 aaKnown RBP18.34■□□□□ 0.53
SRSF5-204ENST00000553548 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
SRSF5-204ENST00000553548 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
SRSF5-204ENST00000553548 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.51
SRSF5-204ENST00000553548 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
SRSF5-204ENST00000553548 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
SRSF5-204ENST00000553548 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
SRSF5-204ENST00000553548 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
SRSF5-204ENST00000553548 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
SRSF5-204ENST00000553548 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
SRSF5-204ENST00000553548 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
SRSF5-204ENST00000553548 WIZO95785 1651 aa18.01■□□□□ 0.47
SRSF5-204ENST00000553548 HMGXB3Q12766 1538 aa17.91■□□□□ 0.46
SRSF5-204ENST00000553548 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
SRSF5-204ENST00000553548 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
SRSF5-204ENST00000553548 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
SRSF5-204ENST00000553548 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
SRSF5-204ENST00000553548 NESP48681 1621 aa17.54■□□□□ 0.4
SRSF5-204ENST00000553548 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
SRSF5-204ENST00000553548 CFTRP13569 1480 aa17.46■□□□□ 0.39
SRSF5-204ENST00000553548 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
SRSF5-204ENST00000553548 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
SRSF5-204ENST00000553548 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
SRSF5-204ENST00000553548 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
SRSF5-204ENST00000553548 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
SRSF5-204ENST00000553548 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
SRSF5-204ENST00000553548 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
SRSF5-204ENST00000553548 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
SRSF5-204ENST00000553548 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
SRSF5-204ENST00000553548 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
SRSF5-204ENST00000553548 WDR62O43379 1518 aa17.08■□□□□ 0.32
SRSF5-204ENST00000553548 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
SRSF5-204ENST00000553548 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
SRSF5-204ENST00000553548 CUX1P39880 1505 aa17.05■□□□□ 0.32
SRSF5-204ENST00000553548 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
SRSF5-204ENST00000553548 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
SRSF5-204ENST00000553548 CUX2O14529 1486 aa16.99■□□□□ 0.31
SRSF5-204ENST00000553548 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
SRSF5-204ENST00000553548 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
SRSF5-204ENST00000553548 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
SRSF5-204ENST00000553548 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
SRSF5-204ENST00000553548 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
SRSF5-204ENST00000553548 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
SRSF5-204ENST00000553548 SOGA1O94964 1423 aa16.87■□□□□ 0.29
SRSF5-204ENST00000553548 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
SRSF5-204ENST00000553548 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
SRSF5-204ENST00000553548 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
SRSF5-204ENST00000553548 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
SRSF5-204ENST00000553548 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
SRSF5-204ENST00000553548 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
SRSF5-204ENST00000553548 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
SRSF5-204ENST00000553548 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■■■■■ 29.4
SRSF5-204ENST00000553548 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
SRSF5-204ENST00000553548 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
SRSF5-204ENST00000553548 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
SRSF5-204ENST00000553548 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
SRSF5-204ENST00000553548 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
SRSF5-204ENST00000553548 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
SRSF5-204ENST00000553548 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
SRSF5-204ENST00000553548 IGF1RP08069 1367 aa16.59■□□□□ 0.25
SRSF5-204ENST00000553548 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
SRSF5-204ENST00000553548 SNAPC4Q5SXM2 1469 aa16.56■□□□□ 0.24
SRSF5-204ENST00000553548 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
SRSF5-204ENST00000553548 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
SRSF5-204ENST00000553548 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
SRSF5-204ENST00000553548 FBLN2P98095 1184 aa16.48■□□□□ 0.23
SRSF5-204ENST00000553548 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
SRSF5-204ENST00000553548 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
SRSF5-204ENST00000553548 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
SRSF5-204ENST00000553548 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
SRSF5-204ENST00000553548 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
SRSF5-204ENST00000553548 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
SRSF5-204ENST00000553548 EEA1Q15075 1411 aa16.45■□□□□ 0.22
SRSF5-204ENST00000553548 CHD1O14646 1710 aa16.45■□□□□ 0.22
SRSF5-204ENST00000553548 CUL7Q14999 1698 aa16.43■□□□□ 0.22
SRSF5-204ENST00000553548 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
SRSF5-204ENST00000553548 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
SRSF5-204ENST00000553548 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
SRSF5-204ENST00000553548 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
SRSF5-204ENST00000553548 NUP160Q12769 1436 aa16.33■□□□□ 0.2
SRSF5-204ENST00000553548 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
SRSF5-204ENST00000553548 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
SRSF5-204ENST00000553548 KIF21BO75037 1637 aa16.29■□□□□ 0.2
SRSF5-204ENST00000553548 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
SRSF5-204ENST00000553548 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms