RNA–Protein interactions for RNA: ENST00000447103.5

FSCN1-204, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 4

Gene FSCN1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-204ENST00000447103 NISCHQ9Y2I1 1504 aa48.24■■■■■ 5.31
FSCN1-204ENST00000447103 CCDC180Q9P1Z9 1646 aa43.44■■■■■ 4.55
FSCN1-204ENST00000447103 ABCC9O60706 1549 aa43.41■■■■■ 4.54
FSCN1-204ENST00000447103 RB1CC1Q8TDY2 1594 aa41.37■■■■■ 4.21
FSCN1-204ENST00000447103 NACADO15069 1562 aa41.04■■■■■ 4.16
FSCN1-204ENST00000447103 DCAF8L2P0C7V8 631 aa40.72■■■■■ 4.11
FSCN1-204ENST00000447103 DNAJC5BQ9UF47 199 aa40.71■■■■■ 4.11
FSCN1-204ENST00000447103 UNC13AQ9UPW8 1703 aa40.47■■■■■ 4.07
FSCN1-204ENST00000447103 MYO15BQ96JP2 1530 aa40.44■■■■■ 4.06
FSCN1-204ENST00000447103 PABPN1Q86U42 306 aaKnown RBP eCLIP40.34■■■■■ 4.05
FSCN1-204ENST00000447103 BICRAQ9NZM4 1560 aa40.1■■■■■ 4.01
FSCN1-204ENST00000447103 ZCCHC6Q5VYS8 1495 aaKnown RBP39.95■■■■□ 3.99
FSCN1-204ENST00000447103 DCAF1Q9Y4B6 1507 aa39.88■■■■□ 3.97
FSCN1-204ENST00000447103 SHROOM4Q9ULL8 1493 aa39.64■■■■□ 3.94
FSCN1-204ENST00000447103 SCRIBQ14160 1630 aa39.5■■■■□ 3.91
FSCN1-204ENST00000447103 CC2D2AQ9P2K1 1620 aa39.26■■■■□ 3.88
FSCN1-204ENST00000447103 EIF4G1Q04637 1599 aaKnown RBP39.15■■■■□ 3.86
FSCN1-204ENST00000447103 CECR2Q9BXF3 1484 aa39.14■■■■□ 3.86
FSCN1-204ENST00000447103 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
FSCN1-204ENST00000447103 ATAD2BQ9ULI0 1458 aa37.7■■■■□ 3.63
FSCN1-204ENST00000447103 SMARCA4P51532 1647 aa37.69■■■■□ 3.62
FSCN1-204ENST00000447103 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
FSCN1-204ENST00000447103 HMGXB3Q12766 1538 aa37.6■■■■□ 3.61
FSCN1-204ENST00000447103 ERCC6Q03468 1493 aa37.55■■■■□ 3.6
FSCN1-204ENST00000447103 DNAJC5Q9H3Z4 198 aa37.54■■■■□ 3.6
FSCN1-204ENST00000447103 CUX2O14529 1486 aa37.52■■■■□ 3.6
FSCN1-204ENST00000447103 BAZ1AQ9NRL2 1556 aaPredicted RBP37.5■■■■□ 3.59
FSCN1-204ENST00000447103 BAZ1BQ9UIG0 1483 aaKnown RBP37.37■■■■□ 3.57
FSCN1-204ENST00000447103 PEG3Q9GZU2 1588 aa37.33■■■■□ 3.57
FSCN1-204ENST00000447103 NESP48681 1621 aa37.25■■■■□ 3.55
FSCN1-204ENST00000447103 MROH2BQ7Z745 1585 aa37.13■■■■□ 3.53
FSCN1-204ENST00000447103 LAMC3Q9Y6N6 1575 aa37.08■■■■□ 3.53
FSCN1-204ENST00000447103 THOC2Q8NI27 1593 aaKnown RBP36.96■■■■□ 3.51
FSCN1-204ENST00000447103 KIF21AQ7Z4S6 1674 aa36.87■■■■□ 3.49
FSCN1-204ENST00000447103 PDS5BQ9NTI5 1447 aa36.83■■■■□ 3.49
FSCN1-204ENST00000447103 WIZO95785 1651 aa36.74■■■■□ 3.47
FSCN1-204ENST00000447103 CADPSQ9ULU8 1353 aa36.67■■■■□ 3.46
FSCN1-204ENST00000447103 MRC2Q9UBG0 1479 aa36.51■■■■□ 3.44
FSCN1-204ENST00000447103 WDR62O43379 1518 aa36.43■■■■□ 3.42
FSCN1-204ENST00000447103 CEP164Q9UPV0 1460 aa36.36■■■■□ 3.41
FSCN1-204ENST00000447103 RSF1Q96T23 1441 aaPredicted RBP36.32■■■■□ 3.4
FSCN1-204ENST00000447103 FANCD2Q9BXW9 1451 aa36.28■■■■□ 3.4
FSCN1-204ENST00000447103 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
FSCN1-204ENST00000447103 CFTRP13569 1480 aa36.24■■■■□ 3.39
FSCN1-204ENST00000447103 PRDM2Q13029 1718 aa36.04■■■■□ 3.36
FSCN1-204ENST00000447103 URB2Q14146 1524 aaKnown RBP35.97■■■■□ 3.35
FSCN1-204ENST00000447103 TRIM41Q8WV44 630 aa35.86■■■■□ 3.33
FSCN1-204ENST00000447103 CCDC88BA6NC98 1476 aa35.81■■■■□ 3.32
FSCN1-204ENST00000447103 OSCARQ8IYS5 282 aa35.75■■■■□ 3.31
FSCN1-204ENST00000447103 IFT140Q96RY7 1462 aa35.63■■■■□ 3.29
FSCN1-204ENST00000447103 TOPBP1Q92547 1522 aa35.58■■■■□ 3.29
FSCN1-204ENST00000447103 ABCC8Q09428 1581 aa35.56■■■■□ 3.28
FSCN1-204ENST00000447103 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
FSCN1-204ENST00000447103 DNMBPQ6XZF7 1577 aa35.48■■■■□ 3.27
FSCN1-204ENST00000447103 EIF4G3O43432 1585 aaKnown RBP35.4■■■■□ 3.26
FSCN1-204ENST00000447103 RIMBP3CA6NJZ7 1639 aa35.34■■■■□ 3.25
FSCN1-204ENST00000447103 RIMBP3BA6NNM3 1639 aa35.34■■■■□ 3.25
FSCN1-204ENST00000447103 RIMBP3Q9UFD9 1639 aa35.34■■■■□ 3.25
FSCN1-204ENST00000447103 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
FSCN1-204ENST00000447103 POLA1P09884 1462 aaPredicted RBP35.21■■■■□ 3.23
FSCN1-204ENST00000447103 CHD1O14646 1710 aa35.19■■■■□ 3.22
FSCN1-204ENST00000447103 ARHGEF11O15085 1522 aa35.19■■■■□ 3.22
FSCN1-204ENST00000447103 AQRO60306 1485 aaKnown RBP eCLIP35.19■■■■□ 3.222e-6■■■□□ 16.7
FSCN1-204ENST00000447103 RAD54L2Q9Y4B4 1467 aa35.04■■■■□ 3.2
FSCN1-204ENST00000447103 SOGA1O94964 1423 aa35.04■■■■□ 3.2
FSCN1-204ENST00000447103 FBLN2P98095 1184 aa35.01■■■■□ 3.2
FSCN1-204ENST00000447103 WDR97A6NE52 1622 aa35■■■■□ 3.19
FSCN1-204ENST00000447103 FGD5Q6ZNL6 1462 aa34.97■■■■□ 3.19
FSCN1-204ENST00000447103 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
FSCN1-204ENST00000447103 CUX1P39880 1505 aa34.91■■■■□ 3.18
FSCN1-204ENST00000447103 CYB5RLQ6IPT4 315 aa34.89■■■■□ 3.18
FSCN1-204ENST00000447103 SNAPC4Q5SXM2 1469 aa34.86■■■■□ 3.17
FSCN1-204ENST00000447103 ARAP1Q96P48 1450 aa34.81■■■■□ 3.16
FSCN1-204ENST00000447103 MAGI1Q96QZ7 1491 aaPredicted RBP34.8■■■■□ 3.16
FSCN1-204ENST00000447103 GRIN2BQ13224 1484 aa34.78■■■■□ 3.16
FSCN1-204ENST00000447103 SYNJ1O43426 1573 aa34.75■■■■□ 3.15
FSCN1-204ENST00000447103 CHMP7Q8WUX9 453 aaPredicted RBP34.75■■■■□ 3.15
FSCN1-204ENST00000447103 CLASP1Q7Z460 1538 aa34.73■■■■□ 3.15
FSCN1-204ENST00000447103 PBRM1Q86U86 1689 aa34.7■■■■□ 3.15
FSCN1-204ENST00000447103 SYNJ2O15056 1496 aa34.68■■■■□ 3.14
FSCN1-204ENST00000447103 SUPT5HO00267 1087 aaKnown RBP34.63■■■■□ 3.13
FSCN1-204ENST00000447103 GAPVD1Q14C86 1478 aa34.62■■■■□ 3.13
FSCN1-204ENST00000447103 TRHP20396 242 aaPredicted RBP34.58■■■■□ 3.13
FSCN1-204ENST00000447103 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
FSCN1-204ENST00000447103 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
FSCN1-204ENST00000447103 WRNQ14191 1432 aaPredicted RBP eCLIP34.42■■■■□ 3.12e-7■■■□□ 18.1
FSCN1-204ENST00000447103 BIVM-ERCC5R4GMW8 1640 aa34.41■■■■□ 3.1
FSCN1-204ENST00000447103 TOP2BQ02880 1626 aa34.37■■■■□ 3.09
FSCN1-204ENST00000447103 GRIN2AQ12879 1464 aa34.32■■■■□ 3.08
FSCN1-204ENST00000447103 ADAMTS12P58397 1594 aa34.31■■■■□ 3.08
FSCN1-204ENST00000447103 CEP170Q5SW79 1584 aa34.2■■■■□ 3.07
FSCN1-204ENST00000447103 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
FSCN1-204ENST00000447103 NUP160Q12769 1436 aa34.19■■■■□ 3.06
FSCN1-204ENST00000447103 ERICH3Q5RHP9 1530 aa34.18■■■■□ 3.06
FSCN1-204ENST00000447103 ERCC6L2Q5T890 1561 aa34.12■■■■□ 3.05
FSCN1-204ENST00000447103 SHROOM2Q13796 1616 aa34.11■■■■□ 3.05
FSCN1-204ENST00000447103 PRG4Q92954 1404 aaPredicted RBP33.87■■■■□ 3.01
FSCN1-204ENST00000447103 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
FSCN1-204ENST00000447103 JPH4Q96JJ6 628 aa33.82■■■■□ 3
FSCN1-204ENST00000447103 KIF13AQ9H1H9 1805 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms