RNA–Protein interactions for RNA: ENST00000578319.5

ACADVL-211, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 3

Gene ACADVL, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-211ENST00000578319 NISCHQ9Y2I1 1504 aa32.49■■■□□ 2.79
ACADVL-211ENST00000578319 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
ACADVL-211ENST00000578319 ABCC9O60706 1549 aa29.08■■■□□ 2.25
ACADVL-211ENST00000578319 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.03
ACADVL-211ENST00000578319 NACADO15069 1562 aa27.53■■■□□ 2
ACADVL-211ENST00000578319 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
ACADVL-211ENST00000578319 DNAJC5BQ9UF47 199 aa27.27■■□□□ 1.96
ACADVL-211ENST00000578319 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
ACADVL-211ENST00000578319 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.931e-15■■■■■ 39.9
ACADVL-211ENST00000578319 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
ACADVL-211ENST00000578319 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
ACADVL-211ENST00000578319 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
ACADVL-211ENST00000578319 DCAF1Q9Y4B6 1507 aa26.84■■□□□ 1.89
ACADVL-211ENST00000578319 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
ACADVL-211ENST00000578319 SCRIBQ14160 1630 aa26.51■■□□□ 1.83
ACADVL-211ENST00000578319 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
ACADVL-211ENST00000578319 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
ACADVL-211ENST00000578319 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
ACADVL-211ENST00000578319 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
ACADVL-211ENST00000578319 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
ACADVL-211ENST00000578319 SMARCA4P51532 1647 aa25.31■■□□□ 1.64
ACADVL-211ENST00000578319 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
ACADVL-211ENST00000578319 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
ACADVL-211ENST00000578319 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
ACADVL-211ENST00000578319 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
ACADVL-211ENST00000578319 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
ACADVL-211ENST00000578319 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
ACADVL-211ENST00000578319 CUX2O14529 1486 aa25.04■■□□□ 1.6
ACADVL-211ENST00000578319 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
ACADVL-211ENST00000578319 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
ACADVL-211ENST00000578319 NESP48681 1621 aa25■■□□□ 1.59
ACADVL-211ENST00000578319 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
ACADVL-211ENST00000578319 WIZO95785 1651 aa24.72■■□□□ 1.55
ACADVL-211ENST00000578319 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
ACADVL-211ENST00000578319 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
ACADVL-211ENST00000578319 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
ACADVL-211ENST00000578319 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
ACADVL-211ENST00000578319 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
ACADVL-211ENST00000578319 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
ACADVL-211ENST00000578319 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
ACADVL-211ENST00000578319 WDR62O43379 1518 aa24.4■■□□□ 1.5
ACADVL-211ENST00000578319 CFTRP13569 1480 aa24.38■■□□□ 1.49
ACADVL-211ENST00000578319 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
ACADVL-211ENST00000578319 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
ACADVL-211ENST00000578319 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
ACADVL-211ENST00000578319 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
ACADVL-211ENST00000578319 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
ACADVL-211ENST00000578319 OSCARQ8IYS5 282 aa23.97■■□□□ 1.43
ACADVL-211ENST00000578319 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
ACADVL-211ENST00000578319 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
ACADVL-211ENST00000578319 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
ACADVL-211ENST00000578319 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
ACADVL-211ENST00000578319 ZNF608Q9ULD9 1512 aaPredicted RBP23.85■■□□□ 1.41
ACADVL-211ENST00000578319 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
ACADVL-211ENST00000578319 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
ACADVL-211ENST00000578319 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
ACADVL-211ENST00000578319 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
ACADVL-211ENST00000578319 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.38
ACADVL-211ENST00000578319 SOGA1O94964 1423 aa23.59■■□□□ 1.37
ACADVL-211ENST00000578319 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
ACADVL-211ENST00000578319 RIMBP3CA6NJZ7 1639 aa23.58■■□□□ 1.36
ACADVL-211ENST00000578319 RIMBP3BA6NNM3 1639 aa23.58■■□□□ 1.36
ACADVL-211ENST00000578319 RIMBP3Q9UFD9 1639 aa23.58■■□□□ 1.36
ACADVL-211ENST00000578319 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
ACADVL-211ENST00000578319 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
ACADVL-211ENST00000578319 FGD5Q6ZNL6 1462 aa23.52■■□□□ 1.36
ACADVL-211ENST00000578319 FBLN2P98095 1184 aa23.52■■□□□ 1.36
ACADVL-211ENST00000578319 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
ACADVL-211ENST00000578319 CHD1O14646 1710 aa23.51■■□□□ 1.35
ACADVL-211ENST00000578319 CUX1P39880 1505 aa23.51■■□□□ 1.35
ACADVL-211ENST00000578319 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
ACADVL-211ENST00000578319 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
ACADVL-211ENST00000578319 SNAPC4Q5SXM2 1469 aa23.4■■□□□ 1.34
ACADVL-211ENST00000578319 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
ACADVL-211ENST00000578319 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
ACADVL-211ENST00000578319 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
ACADVL-211ENST00000578319 GAPVD1Q14C86 1478 aa23.29■■□□□ 1.32
ACADVL-211ENST00000578319 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
ACADVL-211ENST00000578319 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
ACADVL-211ENST00000578319 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
ACADVL-211ENST00000578319 SYNJ1O43426 1573 aa23.26■■□□□ 1.31
ACADVL-211ENST00000578319 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
ACADVL-211ENST00000578319 PBRM1Q86U86 1689 aa23.23■■□□□ 1.31
ACADVL-211ENST00000578319 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.3
ACADVL-211ENST00000578319 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
ACADVL-211ENST00000578319 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
ACADVL-211ENST00000578319 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.29
ACADVL-211ENST00000578319 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
ACADVL-211ENST00000578319 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
ACADVL-211ENST00000578319 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
ACADVL-211ENST00000578319 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
ACADVL-211ENST00000578319 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
ACADVL-211ENST00000578319 NUP160Q12769 1436 aa22.97■■□□□ 1.27
ACADVL-211ENST00000578319 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
ACADVL-211ENST00000578319 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
ACADVL-211ENST00000578319 SHROOM2Q13796 1616 aa22.85■■□□□ 1.25
ACADVL-211ENST00000578319 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
ACADVL-211ENST00000578319 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
ACADVL-211ENST00000578319 IGF1RP08069 1367 aa22.73■■□□□ 1.23
ACADVL-211ENST00000578319 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms