RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 NISCHQ9Y2I1 1504 aa38.15■■■■□ 3.7
EWSR1-207ENST00000406548 CCDC180Q9P1Z9 1646 aa32.5■■■□□ 2.79
EWSR1-207ENST00000406548 SHROOM4Q9ULL8 1493 aa32.44■■■□□ 2.78
EWSR1-207ENST00000406548 ZCCHC6Q5VYS8 1495 aaKnown RBP32.34■■■□□ 2.77
EWSR1-207ENST00000406548 SUPT5HO00267 1087 aaKnown RBP31.85■■■□□ 2.69
EWSR1-207ENST00000406548 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
EWSR1-207ENST00000406548 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
EWSR1-207ENST00000406548 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
EWSR1-207ENST00000406548 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
EWSR1-207ENST00000406548 ABCC9O60706 1549 aa30.57■■■□□ 2.48
EWSR1-207ENST00000406548 HRCP23327 699 aa30.38■■■□□ 2.45
EWSR1-207ENST00000406548 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
EWSR1-207ENST00000406548 PCGF6Q9BYE7 350 aa30.21■■■□□ 2.43
EWSR1-207ENST00000406548 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
EWSR1-207ENST00000406548 NACADO15069 1562 aa30.15■■■□□ 2.42
EWSR1-207ENST00000406548 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
EWSR1-207ENST00000406548 RB1CC1Q8TDY2 1594 aa29.96■■■□□ 2.39
EWSR1-207ENST00000406548 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
EWSR1-207ENST00000406548 TRIM26Q12899 539 aaPredicted RBP29.69■■■□□ 2.34
EWSR1-207ENST00000406548 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
EWSR1-207ENST00000406548 PPARGC1BQ86YN6 1023 aaKnown RBP29.64■■■□□ 2.33
EWSR1-207ENST00000406548 MROH2BQ7Z745 1585 aa29.63■■■□□ 2.33
EWSR1-207ENST00000406548 WIZO95785 1651 aa29.5■■■□□ 2.31
EWSR1-207ENST00000406548 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
EWSR1-207ENST00000406548 FAM9AQ8IZU1 332 aaPredicted RBP29.4■■■□□ 2.3
EWSR1-207ENST00000406548 EIF4G1Q04637 1599 aaKnown RBP29.25■■■□□ 2.27
EWSR1-207ENST00000406548 UNC13AQ9UPW8 1703 aa29.22■■■□□ 2.27
EWSR1-207ENST00000406548 ZEB1P37275 1124 aaPredicted RBP29.14■■■□□ 2.26
EWSR1-207ENST00000406548 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
EWSR1-207ENST00000406548 EHMT2Q96KQ7 1210 aa29.08■■■□□ 2.25
EWSR1-207ENST00000406548 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
EWSR1-207ENST00000406548 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
EWSR1-207ENST00000406548 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
EWSR1-207ENST00000406548 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
EWSR1-207ENST00000406548 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
EWSR1-207ENST00000406548 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.218e-9■□□□□ 10.7
EWSR1-207ENST00000406548 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
EWSR1-207ENST00000406548 SOGA1O94964 1423 aa28.57■■■□□ 2.16
EWSR1-207ENST00000406548 EEA1Q15075 1411 aa28.56■■■□□ 2.16
EWSR1-207ENST00000406548 CEP162Q5TB80 1403 aa28.55■■■□□ 2.16
EWSR1-207ENST00000406548 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
EWSR1-207ENST00000406548 TNIKQ9UKE5 1360 aa28.51■■■□□ 2.15
EWSR1-207ENST00000406548 RUSC2Q8N2Y8 1516 aa28.42■■■□□ 2.14
EWSR1-207ENST00000406548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.41■■■□□ 2.14
EWSR1-207ENST00000406548 CSRNP3Q8WYN3 585 aa28.41■■■□□ 2.14
EWSR1-207ENST00000406548 CCER1Q8TC90 406 aaPredicted RBP28.38■■■□□ 2.13
EWSR1-207ENST00000406548 GOLGA3Q08378 1498 aa28.36■■■□□ 2.13
EWSR1-207ENST00000406548 UBTFP17480 764 aaKnown RBP28.27■■■□□ 2.12
EWSR1-207ENST00000406548 SYNJ1O43426 1573 aa28.26■■■□□ 2.12
EWSR1-207ENST00000406548 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
EWSR1-207ENST00000406548 TTBK1Q5TCY1 1321 aaPredicted RBP28.22■■■□□ 2.11
EWSR1-207ENST00000406548 KIF21BO75037 1637 aa28.2■■■□□ 2.11
EWSR1-207ENST00000406548 CEP164Q9UPV0 1460 aa28.18■■■□□ 2.1
EWSR1-207ENST00000406548 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
EWSR1-207ENST00000406548 SCAF1Q9H7N4 1312 aaKnown RBP28.03■■■□□ 2.08
EWSR1-207ENST00000406548 CLIP1P30622 1438 aa27.99■■■□□ 2.07
EWSR1-207ENST00000406548 TOP2BQ02880 1626 aa27.94■■■□□ 2.06
EWSR1-207ENST00000406548 VPS8Q8N3P4 1428 aa27.92■■■□□ 2.06
EWSR1-207ENST00000406548 RAPGEF2Q9Y4G8 1499 aa27.91■■■□□ 2.06
EWSR1-207ENST00000406548 DIEXFQ68CQ4 756 aaKnown RBP27.9■■■□□ 2.06
EWSR1-207ENST00000406548 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
EWSR1-207ENST00000406548 BIVM-ERCC5R4GMW8 1640 aa27.87■■■□□ 2.05
EWSR1-207ENST00000406548 HMGXB3Q12766 1538 aa27.83■■■□□ 2.04
EWSR1-207ENST00000406548 ACIN1Q9UKV3 1341 aaKnown RBP27.76■■■□□ 2.04
EWSR1-207ENST00000406548 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
EWSR1-207ENST00000406548 APLP2Q06481 763 aa27.7■■■□□ 2.02
EWSR1-207ENST00000406548 HNRNPUL2Q1KMD3 747 aaKnown RBP27.69■■■□□ 2.02
EWSR1-207ENST00000406548 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
EWSR1-207ENST00000406548 NEUROD1Q13562 356 aa27.68■■■□□ 2.02
EWSR1-207ENST00000406548 PELP1Q8IZL8 1130 aaKnown RBP27.67■■■□□ 2.02
EWSR1-207ENST00000406548 PRXQ9BXM0 1461 aa27.66■■■□□ 2.02
EWSR1-207ENST00000406548 CENPBP07199 599 aaPredicted RBP27.61■■■□□ 2.01
EWSR1-207ENST00000406548 CUX1P39880 1505 aa27.6■■■□□ 2.01
EWSR1-207ENST00000406548 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
EWSR1-207ENST00000406548 ARAP1Q96P48 1450 aa27.56■■■□□ 2
EWSR1-207ENST00000406548 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
EWSR1-207ENST00000406548 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
EWSR1-207ENST00000406548 CFTRP13569 1480 aa27.49■■□□□ 1.99
EWSR1-207ENST00000406548 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
EWSR1-207ENST00000406548 GTF3C3Q9Y5Q9 886 aa27.41■■□□□ 1.98
EWSR1-207ENST00000406548 CLSPNQ9HAW4 1339 aa27.32■■□□□ 1.96
EWSR1-207ENST00000406548 KANK4Q5T7N3 995 aaPredicted RBP27.31■■□□□ 1.96
EWSR1-207ENST00000406548 RRBP1Q9P2E9 1410 aaKnown RBP27.3■■□□□ 1.96
EWSR1-207ENST00000406548 ARHGAP35Q9NRY4 1499 aa27.29■■□□□ 1.96
EWSR1-207ENST00000406548 DHX57Q6P158 1386 aaKnown RBP27.29■■□□□ 1.96
EWSR1-207ENST00000406548 MIER1Q8N108 512 aa27.25■■□□□ 1.95
EWSR1-207ENST00000406548 YTHDC1Q96MU7 727 aaKnown RBP27.18■■□□□ 1.94
EWSR1-207ENST00000406548 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
EWSR1-207ENST00000406548 CUX2O14529 1486 aa27.18■■□□□ 1.94
EWSR1-207ENST00000406548 CCNB3Q8WWL7 1395 aa27.14■■□□□ 1.93
EWSR1-207ENST00000406548 IGF1RP08069 1367 aa27.13■■□□□ 1.93
EWSR1-207ENST00000406548 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
EWSR1-207ENST00000406548 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
EWSR1-207ENST00000406548 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
EWSR1-207ENST00000406548 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
EWSR1-207ENST00000406548 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
EWSR1-207ENST00000406548 CFAP43Q8NDM7 1665 aa26.91■■□□□ 1.9
EWSR1-207ENST00000406548 ITGAEP38570 1179 aa26.89■■□□□ 1.9
EWSR1-207ENST00000406548 FHAD1B1AJZ9 1412 aa26.89■■□□□ 1.89
EWSR1-207ENST00000406548 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms