Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.591e-8■■□□□ 12.6
MATR3P43243 APOE-204ENST00000446996 737 ntTSL 224.01■■□□□ 1.431e-8■■□□□ 12.6
MATR3P43243 APOE-203ENST00000434152 864 ntTSL 222.12■■□□□ 1.131e-8■■□□□ 12.6
MATR3P43243 DCTN1-220ENST00000477966 766 ntTSL 221.03■□□□□ 0.961e-8■■□□□ 12.6
MATR3P43243 DCTN1-216ENST00000462813 342 ntTSL 1 (best)19.55■□□□□ 0.721e-8■■□□□ 12.6
MATR3P43243 DCTN1-217ENST00000463583 569 ntTSL 419.55■□□□□ 0.721e-8■■□□□ 12.6
MATR3P43243 DCTN1-215ENST00000458655 565 ntTSL 418.37■□□□□ 0.531e-8■■□□□ 12.6
MATR3P43243 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.431e-8■■□□□ 12.6
MATR3P43243 DCTN1-219ENST00000470351 557 ntTSL 216.68■□□□□ 0.261e-8■■□□□ 12.6
MATR3P43243 DCTN1-218ENST00000466110 5414 ntTSL 215.08■□□□□ 01e-8■■□□□ 12.6
MATR3P43243 DCTN1-210ENST00000434055 4229 ntTSL 214.51□□□□□ -0.091e-8■■□□□ 12.6
MATR3P43243 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC13.76□□□□□ -0.211e-8■■□□□ 12.6
MATR3P43243 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.31e-8■■□□□ 12.6
MATR3P43243 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC12.98□□□□□ -0.331e-8■■□□□ 12.6
MATR3P43243 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.411e-8■■□□□ 12.6
MATR3P43243 FAM234B-202ENST00000416494 2623 ntTSL 212.46□□□□□ -0.411e-8■■□□□ 12.6
MATR3P43243 SETD2-209ENST00000638947 1984 ntTSL 5 BASIC12.4□□□□□ -0.425e-7■■□□□ 12.6
MATR3P43243 DCTN1-202ENST00000394003 4479 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.451e-8■■□□□ 12.6
MATR3P43243 DCTN1-204ENST00000409438 4145 ntTSL 1 (best) BASIC12.23□□□□□ -0.451e-8■■□□□ 12.6
MATR3P43243 NDUFA9-202ENST00000396655 1037 ntTSL 1 (best)12.09□□□□□ -0.471e-8■■□□□ 12.6
MATR3P43243 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC11.19□□□□□ -0.621e-8■■□□□ 12.6
MATR3P43243 AC005832.4-201ENST00000536588 818 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.621e-8■■□□□ 12.6
MATR3P43243 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.641e-8■■□□□ 12.6
MATR3P43243 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.681e-8■■□□□ 12.6
MATR3P43243 FAM234B-204ENST00000537625 2011 ntTSL 1 (best)10.43□□□□□ -0.741e-8■■□□□ 12.6
MATR3P43243 NDUFA9-203ENST00000535050 512 ntTSL 310□□□□□ -0.811e-8■■□□□ 12.6
MATR3P43243 NDUFA9-205ENST00000539573 500 ntTSL 39.72□□□□□ -0.851e-8■■□□□ 12.6
MATR3P43243 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.861e-8■■□□□ 12.6
MATR3P43243 SETD2-208ENST00000492397 746 ntTSL 39.57□□□□□ -0.885e-7■■□□□ 12.6
MATR3P43243 SETD2-201ENST00000330022 8172 ntTSL 1 (best)6.68□□□□□ -1.345e-7■■□□□ 12.6
MATR3P43243 SETD2-204ENST00000431180 7555 ntTSL 26.42□□□□□ -1.385e-7■■□□□ 12.6
MATR3P43243 SETD2-205ENST00000445387 7075 ntTSL 54.98□□□□□ -1.615e-7■■□□□ 12.6
MATR3P43243 PDE3B-205ENST00000534317 5521 ntTSL 1 (best)21.66■■□□□ 1.062e-6■■□□□ 12.6
MATR3P43243 WWTR1-209ENST00000479238 697 ntTSL 321.36■■□□□ 1.015e-7■■□□□ 12.6
MATR3P43243 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.645e-7■■□□□ 12.6
MATR3P43243 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.515e-7■■□□□ 12.6
MATR3P43243 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.155e-7■■□□□ 12.6
MATR3P43243 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.543e-7■■□□□ 12.5
MATR3P43243 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.583e-7■■□□□ 12.5
MATR3P43243 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC11□□□□□ -0.653e-7■■□□□ 12.5
MATR3P43243 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC10.96□□□□□ -0.663e-7■■□□□ 12.5
MATR3P43243 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC10.52□□□□□ -0.733e-7■■□□□ 12.5
MATR3P43243 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC10.43□□□□□ -0.743e-7■■□□□ 12.5
MATR3P43243 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC9.9□□□□□ -0.823e-7■■□□□ 12.5
MATR3P43243 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC9.38□□□□□ -0.913e-7■■□□□ 12.5
MATR3P43243 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.953e-6■■□□□ 12.5
MATR3P43243 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.263e-6■■□□□ 12.5
MATR3P43243 BRD4-208ENST00000597315 892 ntTSL 529.55■■■□□ 2.322e-8■■□□□ 12.5
MATR3P43243 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.16■■□□□ 1.942e-8■■□□□ 12.5
MATR3P43243 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.132e-8■■□□□ 12.5
MATR3P43243 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)15.76■□□□□ 0.112e-8■■□□□ 12.5
MATR3P43243 BRD4-210ENST00000601941 604 ntTSL 513.34□□□□□ -0.272e-8■■□□□ 12.5
MATR3P43243 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.483e-6■■□□□ 12.5
MATR3P43243 TGFBR1-207ENST00000549766 1678 ntTSL 526.6■■□□□ 1.855e-6■■□□□ 12.5
MATR3P43243 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.455e-6■■□□□ 12.5
MATR3P43243 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.19■■□□□ 1.145e-6■■□□□ 12.5
MATR3P43243 CRKL-202ENST00000411769 2037 ntTSL 1 (best)20.7■□□□□ 0.96e-6■■□□□ 12.5
MATR3P43243 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.96e-6■■□□□ 12.5
MATR3P43243 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.21■□□□□ 0.835e-6■■□□□ 12.5
MATR3P43243 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.255e-6■■□□□ 12.5
MATR3P43243 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.245e-6■■□□□ 12.5
MATR3P43243 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.085e-6■■□□□ 12.5
MATR3P43243 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -05e-6■■□□□ 12.5
MATR3P43243 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC14.85□□□□□ -0.035e-6■■□□□ 12.5
MATR3P43243 SKA1-205ENST00000494518 746 ntTSL 213.82□□□□□ -0.25e-6■■□□□ 12.5
MATR3P43243 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC13.66□□□□□ -0.225e-6■■□□□ 12.5
MATR3P43243 SIAH1-207ENST00000568007 2683 ntTSL 1 (best)13.26□□□□□ -0.293e-6■■□□□ 12.5
MATR3P43243 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC13.17□□□□□ -0.35e-6■■□□□ 12.5
MATR3P43243 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC12.55□□□□□ -0.45e-6■■□□□ 12.5
MATR3P43243 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC12.36□□□□□ -0.435e-6■■□□□ 12.5
MATR3P43243 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC12.03□□□□□ -0.485e-11■■□□□ 12.5
MATR3P43243 TCF12-219ENST00000560836 212 ntTSL 311.58□□□□□ -0.565e-6■■□□□ 12.5
MATR3P43243 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.595e-6■■□□□ 12.5
MATR3P43243 SKA1-201ENST00000285116 2905 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.595e-6■■□□□ 12.5
MATR3P43243 SKA1-204ENST00000488454 669 ntTSL 3 BASIC11.29□□□□□ -0.65e-6■■□□□ 12.5
MATR3P43243 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC10.86□□□□□ -0.675e-11■■□□□ 12.5
MATR3P43243 MSL3-205ENST00000380692 1071 ntTSL 310.02□□□□□ -0.815e-11■■□□□ 12.5
MATR3P43243 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.815e-6■■□□□ 12.5
MATR3P43243 SIAH1-204ENST00000563745 589 ntTSL 49.17□□□□□ -0.943e-6■■□□□ 12.5
MATR3P43243 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC9.17□□□□□ -0.945e-11■■□□□ 12.5
MATR3P43243 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.955e-11■■□□□ 12.5
MATR3P43243 TMOD3-211ENST00000561438 1139 ntTSL 58.99□□□□□ -0.975e-6■■□□□ 12.5
MATR3P43243 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.33□□□□□ -1.085e-11■■□□□ 12.5
MATR3P43243 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.155e-6■■□□□ 12.5
MATR3P43243 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.82□□□□□ -1.165e-6■■□□□ 12.5
MATR3P43243 MSL3-210ENST00000468149 1646 ntTSL 27.61□□□□□ -1.195e-11■■□□□ 12.5
MATR3P43243 TCF12-221ENST00000560948 440 ntTSL 26.49□□□□□ -1.375e-6■■□□□ 12.5
MATR3P43243 MSL3-204ENST00000380691 589 ntTSL 36.1□□□□□ -1.435e-11■■□□□ 12.5
MATR3P43243 DROSHA-211ENST00000510375 579 ntTSL 45.81□□□□□ -1.485e-6■■□□□ 12.5
MATR3P43243 TGFBR1-204ENST00000547314 533 ntTSL 44.69□□□□□ -1.665e-6■■□□□ 12.5
MATR3P43243 TMOD3-207ENST00000560549 1474 ntTSL 1 (best)4.54□□□□□ -1.685e-6■■□□□ 12.5
MATR3P43243 DROSHA-216ENST00000512124 555 ntTSL 54.48□□□□□ -1.695e-6■■□□□ 12.5
MATR3P43243 DROSHA-219ENST00000512885 437 ntTSL 44.35□□□□□ -1.715e-6■■□□□ 12.5
MATR3P43243 SLF1-203ENST00000466957 593 ntTSL 54.18□□□□□ -1.745e-6■■□□□ 12.5
MATR3P43243 TCF12-216ENST00000560191 1205 ntTSL 24.17□□□□□ -1.745e-6■■□□□ 12.5
MATR3P43243 TCF12-227ENST00000561454 564 ntTSL 43.73□□□□□ -1.815e-6■■□□□ 12.5
MATR3P43243 NPAT-203ENST00000530859 1806 ntTSL 23.28□□□□□ -1.885e-6■■□□□ 12.5
MATR3P43243 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.22□□□□□ -2.055e-6■■□□□ 12.5
MATR3P43243 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.135e-6■■□□□ 12.5
MATR3P43243 TGFBR1-210ENST00000552573 526 ntTSL 41.56□□□□□ -2.165e-6■■□□□ 12.5
Retrieved 100 of 16,209 protein–RNA pairs in 71.4 ms