RNA–Protein interactions for RNA: ENST00000372595.5

SCMH1-205, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,231 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-205ENST00000372595 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
SCMH1-205ENST00000372595 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
SCMH1-205ENST00000372595 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
SCMH1-205ENST00000372595 SUPT5HO00267 1087 aaKnown RBP15.57■□□□□ 0.08
SCMH1-205ENST00000372595 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
SCMH1-205ENST00000372595 CCDC180Q9P1Z9 1646 aa15.34■□□□□ 0.05
SCMH1-205ENST00000372595 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
SCMH1-205ENST00000372595 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
SCMH1-205ENST00000372595 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
SCMH1-205ENST00000372595 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
SCMH1-205ENST00000372595 HRCP23327 699 aa14.68□□□□□ -0.06
SCMH1-205ENST00000372595 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
SCMH1-205ENST00000372595 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
SCMH1-205ENST00000372595 ABCC9O60706 1549 aa14.61□□□□□ -0.07
SCMH1-205ENST00000372595 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
SCMH1-205ENST00000372595 RSF1Q96T23 1441 aaPredicted RBP14.46□□□□□ -0.09
SCMH1-205ENST00000372595 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
SCMH1-205ENST00000372595 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
SCMH1-205ENST00000372595 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
SCMH1-205ENST00000372595 PPARGC1BQ86YN6 1023 aaKnown RBP14.37□□□□□ -0.11
SCMH1-205ENST00000372595 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
SCMH1-205ENST00000372595 NACADO15069 1562 aa14.31□□□□□ -0.12
SCMH1-205ENST00000372595 MYT1Q01538 1121 aa14.28□□□□□ -0.12
SCMH1-205ENST00000372595 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
SCMH1-205ENST00000372595 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.14
SCMH1-205ENST00000372595 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
SCMH1-205ENST00000372595 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
SCMH1-205ENST00000372595 WIZO95785 1651 aa14.1□□□□□ -0.15
SCMH1-205ENST00000372595 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
SCMH1-205ENST00000372595 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
SCMH1-205ENST00000372595 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
SCMH1-205ENST00000372595 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
SCMH1-205ENST00000372595 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
SCMH1-205ENST00000372595 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
SCMH1-205ENST00000372595 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
SCMH1-205ENST00000372595 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
SCMH1-205ENST00000372595 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
SCMH1-205ENST00000372595 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
SCMH1-205ENST00000372595 SMARCA2P51531 1590 aa13.77□□□□□ -0.21
SCMH1-205ENST00000372595 SOGA1O94964 1423 aa13.75□□□□□ -0.21
SCMH1-205ENST00000372595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
SCMH1-205ENST00000372595 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
SCMH1-205ENST00000372595 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
SCMH1-205ENST00000372595 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.21
SCMH1-205ENST00000372595 RANGAP1P46060 587 aaPredicted RBP13.7□□□□□ -0.22
SCMH1-205ENST00000372595 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
SCMH1-205ENST00000372595 RUSC2Q8N2Y8 1516 aa13.67□□□□□ -0.22
SCMH1-205ENST00000372595 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
SCMH1-205ENST00000372595 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
SCMH1-205ENST00000372595 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
SCMH1-205ENST00000372595 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
SCMH1-205ENST00000372595 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
SCMH1-205ENST00000372595 BAZ1BQ9UIG0 1483 aaKnown RBP13.59□□□□□ -0.23
SCMH1-205ENST00000372595 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
SCMH1-205ENST00000372595 EEA1Q15075 1411 aa13.58□□□□□ -0.24
SCMH1-205ENST00000372595 APLP2Q06481 763 aa13.54□□□□□ -0.24
SCMH1-205ENST00000372595 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
SCMH1-205ENST00000372595 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.24
SCMH1-205ENST00000372595 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
SCMH1-205ENST00000372595 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
SCMH1-205ENST00000372595 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
SCMH1-205ENST00000372595 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
SCMH1-205ENST00000372595 CLIP1P30622 1438 aa13.45□□□□□ -0.26
SCMH1-205ENST00000372595 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
SCMH1-205ENST00000372595 RAPGEF2Q9Y4G8 1499 aa13.39□□□□□ -0.27
SCMH1-205ENST00000372595 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
SCMH1-205ENST00000372595 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
SCMH1-205ENST00000372595 KIF21BO75037 1637 aa13.3□□□□□ -0.28
SCMH1-205ENST00000372595 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
SCMH1-205ENST00000372595 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
SCMH1-205ENST00000372595 CENPBP07199 599 aaPredicted RBP13.28□□□□□ -0.28
SCMH1-205ENST00000372595 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
SCMH1-205ENST00000372595 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
SCMH1-205ENST00000372595 ITGAEP38570 1179 aa13.24□□□□□ -0.29
SCMH1-205ENST00000372595 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
SCMH1-205ENST00000372595 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
SCMH1-205ENST00000372595 CUX1P39880 1505 aa13.21□□□□□ -0.3
SCMH1-205ENST00000372595 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
SCMH1-205ENST00000372595 ATP1B4Q9UN42 357 aaPredicted RBP13.2□□□□□ -0.3
SCMH1-205ENST00000372595 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
SCMH1-205ENST00000372595 CFTRP13569 1480 aa13.17□□□□□ -0.3
SCMH1-205ENST00000372595 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
SCMH1-205ENST00000372595 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
SCMH1-205ENST00000372595 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
SCMH1-205ENST00000372595 CUX2O14529 1486 aa13.15□□□□□ -0.3
SCMH1-205ENST00000372595 CADPSQ9ULU8 1353 aa13.12□□□□□ -0.31
SCMH1-205ENST00000372595 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
SCMH1-205ENST00000372595 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
SCMH1-205ENST00000372595 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
SCMH1-205ENST00000372595 IGF1RP08069 1367 aa13.08□□□□□ -0.32
SCMH1-205ENST00000372595 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.32
SCMH1-205ENST00000372595 MIER1Q8N108 512 aa13.08□□□□□ -0.32
SCMH1-205ENST00000372595 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
SCMH1-205ENST00000372595 FAM50AQ14320 339 aaKnown RBP13.04□□□□□ -0.32
SCMH1-205ENST00000372595 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
SCMH1-205ENST00000372595 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
SCMH1-205ENST00000372595 DHX57Q6P158 1386 aaKnown RBP13.01□□□□□ -0.33
SCMH1-205ENST00000372595 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
SCMH1-205ENST00000372595 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
SCMH1-205ENST00000372595 RAD54L2Q9Y4B4 1467 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms