RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 NISCHQ9Y2I1 1504 aa11.55□□□□□ -0.56
SLF1-201ENST00000265140 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
SLF1-201ENST00000265140 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.63
SLF1-201ENST00000265140 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
SLF1-201ENST00000265140 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
SLF1-201ENST00000265140 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
SLF1-201ENST00000265140 CCER1Q8TC90 406 aaPredicted RBP10.63□□□□□ -0.71
SLF1-201ENST00000265140 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.72
SLF1-201ENST00000265140 PCGF6Q9BYE7 350 aa10.52□□□□□ -0.73
SLF1-201ENST00000265140 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
SLF1-201ENST00000265140 MYT1Q01538 1121 aa10.4□□□□□ -0.74
SLF1-201ENST00000265140 TRIM41Q8WV44 630 aa10.3□□□□□ -0.76
SLF1-201ENST00000265140 APLP2Q06481 763 aa10.28□□□□□ -0.76
SLF1-201ENST00000265140 CENPBP07199 599 aaPredicted RBP10.23□□□□□ -0.77
SLF1-201ENST00000265140 YTHDC1Q96MU7 727 aaKnown RBP10.23□□□□□ -0.77
SLF1-201ENST00000265140 ZEB1P37275 1124 aaPredicted RBP10.23□□□□□ -0.77
SLF1-201ENST00000265140 CHIC1Q5VXU3 224 aa10.22□□□□□ -0.77
SLF1-201ENST00000265140 TTBK1Q5TCY1 1321 aaPredicted RBP10.18□□□□□ -0.78
SLF1-201ENST00000265140 NEFLP07196 543 aa10.17□□□□□ -0.78
SLF1-201ENST00000265140 HRCP23327 699 aa10.16□□□□□ -0.78
SLF1-201ENST00000265140 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
SLF1-201ENST00000265140 LOC105371045A0A1W2PR82 267 aa10.11□□□□□ -0.79
SLF1-201ENST00000265140 TRIM26Q12899 539 aaPredicted RBP10.1□□□□□ -0.79
SLF1-201ENST00000265140 UBTFP17480 764 aaKnown RBP10.06□□□□□ -0.8
SLF1-201ENST00000265140 RANGAP1P46060 587 aaPredicted RBP10.02□□□□□ -0.81
SLF1-201ENST00000265140 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
SLF1-201ENST00000265140 CCDC180Q9P1Z9 1646 aa9.95□□□□□ -0.82
SLF1-201ENST00000265140 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
SLF1-201ENST00000265140 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
SLF1-201ENST00000265140 ATP1B4Q9UN42 357 aaPredicted RBP9.83□□□□□ -0.84
SLF1-201ENST00000265140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.78□□□□□ -0.84
SLF1-201ENST00000265140 HNRNPUL2Q1KMD3 747 aaKnown RBP9.77□□□□□ -0.85
SLF1-201ENST00000265140 ZCCHC6Q5VYS8 1495 aaKnown RBP9.75□□□□□ -0.85
SLF1-201ENST00000265140 CLSPNQ9HAW4 1339 aa9.73□□□□□ -0.85
SLF1-201ENST00000265140 DIEXFQ68CQ4 756 aaKnown RBP9.7□□□□□ -0.86
SLF1-201ENST00000265140 ITGAEP38570 1179 aa9.7□□□□□ -0.86
SLF1-201ENST00000265140 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
SLF1-201ENST00000265140 MYT1LQ9UL68 1186 aa9.6□□□□□ -0.87
SLF1-201ENST00000265140 ABCC9O60706 1549 aa9.59□□□□□ -0.87
SLF1-201ENST00000265140 SLC4A1APQ9BWU0 796 aaKnown RBP9.57□□□□□ -0.88
SLF1-201ENST00000265140 CSRNP3Q8WYN3 585 aa9.57□□□□□ -0.88
SLF1-201ENST00000265140 PABPN1Q86U42 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
SLF1-201ENST00000265140 ZBTB47Q9UFB7 747 aaPredicted RBP9.55□□□□□ -0.88
SLF1-201ENST00000265140 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
SLF1-201ENST00000265140 DCAF1Q9Y4B6 1507 aa9.52□□□□□ -0.88
SLF1-201ENST00000265140 CNGB1Q14028 1251 aaPredicted RBP9.51□□□□□ -0.89
SLF1-201ENST00000265140 GLIPR1L2Q4G1C9 344 aa9.51□□□□□ -0.89
SLF1-201ENST00000265140 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
SLF1-201ENST00000265140 EIF5BO60841 1220 aaKnown RBP9.46□□□□□ -0.89
SLF1-201ENST00000265140 FAM50AQ14320 339 aaKnown RBP9.44□□□□□ -0.9
SLF1-201ENST00000265140 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
SLF1-201ENST00000265140 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
SLF1-201ENST00000265140 MYO15BQ96JP2 1530 aa9.38□□□□□ -0.91
SLF1-201ENST00000265140 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
SLF1-201ENST00000265140 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
SLF1-201ENST00000265140 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
SLF1-201ENST00000265140 CDK11AQ9UQ88 783 aaPredicted RBP9.35□□□□□ -0.91
SLF1-201ENST00000265140 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
SLF1-201ENST00000265140 ANP32CO43423 234 aa9.33□□□□□ -0.92
SLF1-201ENST00000265140 RSF1Q96T23 1441 aaPredicted RBP9.32□□□□□ -0.92
SLF1-201ENST00000265140 CANXP27824 592 aaKnown RBP9.32□□□□□ -0.92
SLF1-201ENST00000265140 BCANQ96GW7 911 aa9.31□□□□□ -0.92
SLF1-201ENST00000265140 SCRIBQ14160 1630 aa9.31□□□□□ -0.92
SLF1-201ENST00000265140 P3H3Q8IVL6 736 aa9.3□□□□□ -0.92
SLF1-201ENST00000265140 SCAF1Q9H7N4 1312 aaKnown RBP9.27□□□□□ -0.93
SLF1-201ENST00000265140 ANP32AP39687 249 aaKnown RBP9.26□□□□□ -0.93
SLF1-201ENST00000265140 NACADO15069 1562 aa9.26□□□□□ -0.93
SLF1-201ENST00000265140 NEFMP07197 916 aa9.26□□□□□ -0.93
SLF1-201ENST00000265140 HSP90AA1P07900 732 aaKnown RBP9.24□□□□□ -0.93
SLF1-201ENST00000265140 MIER1Q8N108 512 aa9.23□□□□□ -0.93
SLF1-201ENST00000265140 DDX10Q13206 875 aaKnown RBP9.22□□□□□ -0.93
SLF1-201ENST00000265140 ZNF326Q5BKZ1 582 aaKnown RBP9.21□□□□□ -0.94
SLF1-201ENST00000265140 TNNT2P45379 298 aaPredicted RBP9.18□□□□□ -0.94
SLF1-201ENST00000265140 CLIP1P30622 1438 aa9.18□□□□□ -0.94
SLF1-201ENST00000265140 NPM2Q86SE8 214 aaKnown RBP9.18□□□□□ -0.94
SLF1-201ENST00000265140 EEA1Q15075 1411 aa9.17□□□□□ -0.94
SLF1-201ENST00000265140 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
SLF1-201ENST00000265140 CEP162Q5TB80 1403 aa9.16□□□□□ -0.94
SLF1-201ENST00000265140 ARID3CA6NKF2 412 aa9.16□□□□□ -0.94
SLF1-201ENST00000265140 FKBP8Q14318 412 aa9.15□□□□□ -0.94
SLF1-201ENST00000265140 TONSLQ96HA7 1378 aa9.15□□□□□ -0.94
SLF1-201ENST00000265140 TNIKQ9UKE5 1360 aa9.14□□□□□ -0.95
SLF1-201ENST00000265140 FBLN2P98095 1184 aa9.14□□□□□ -0.95
SLF1-201ENST00000265140 HNRNPUQ00839 825 aaKnown RBP eCLIP9.13□□□□□ -0.95
SLF1-201ENST00000265140 UPF2Q9HAU5 1272 aaKnown RBP9.13□□□□□ -0.95
SLF1-201ENST00000265140 WRNQ14191 1432 aaPredicted RBP eCLIP9.1□□□□□ -0.95
SLF1-201ENST00000265140 CECR2Q9BXF3 1484 aa9.1□□□□□ -0.95
SLF1-201ENST00000265140 ZNF777Q9ULD5 760 aaPredicted RBP9.08□□□□□ -0.96
SLF1-201ENST00000265140 GOLGA3Q08378 1498 aa9.08□□□□□ -0.96
SLF1-201ENST00000265140 HIRIP3Q9BW71 556 aaPredicted RBP9.07□□□□□ -0.96
SLF1-201ENST00000265140 ARXQ96QS3 562 aa9.07□□□□□ -0.96
SLF1-201ENST00000265140 CHIC2Q9UKJ5 165 aa9.07□□□□□ -0.96
SLF1-201ENST00000265140 FAM9BQ8IZU0 186 aa9.05□□□□□ -0.96
SLF1-201ENST00000265140 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
SLF1-201ENST00000265140 MRS2Q9HD23 443 aa9.01□□□□□ -0.97
SLF1-201ENST00000265140 TRIM44Q96DX7 344 aaPredicted RBP9.01□□□□□ -0.97
SLF1-201ENST00000265140 CEP164Q9UPV0 1460 aa9.01□□□□□ -0.97
SLF1-201ENST00000265140 SOGA1O94964 1423 aa9.01□□□□□ -0.97
SLF1-201ENST00000265140 EIF4G2P78344 907 aaKnown RBP eCLIP9□□□□□ -0.97
SLF1-201ENST00000265140 TMC1Q8TDI8 760 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms