RNA–Protein interactions for RNA: ENST00000409240.5

DCTN1-203, Transcript of dynactin subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DCTN1, Length 4,365 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-203ENST00000409240 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
DCTN1-203ENST00000409240 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
DCTN1-203ENST00000409240 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
DCTN1-203ENST00000409240 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
DCTN1-203ENST00000409240 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
DCTN1-203ENST00000409240 NISCHQ9Y2I1 1504 aa24.09■■□□□ 1.45
DCTN1-203ENST00000409240 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
DCTN1-203ENST00000409240 FAM9AQ8IZU1 332 aaPredicted RBP24.07■■□□□ 1.44
DCTN1-203ENST00000409240 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
DCTN1-203ENST00000409240 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
DCTN1-203ENST00000409240 APLP2Q06481 763 aa23.52■■□□□ 1.36
DCTN1-203ENST00000409240 CCER1Q8TC90 406 aaPredicted RBP23.5■■□□□ 1.35
DCTN1-203ENST00000409240 YTHDC1Q96MU7 727 aaKnown RBP23.49■■□□□ 1.35
DCTN1-203ENST00000409240 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
DCTN1-203ENST00000409240 PPARGC1BQ86YN6 1023 aaKnown RBP23.38■■□□□ 1.33
DCTN1-203ENST00000409240 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
DCTN1-203ENST00000409240 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
DCTN1-203ENST00000409240 HRCP23327 699 aa23.19■■□□□ 1.3
DCTN1-203ENST00000409240 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
DCTN1-203ENST00000409240 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
DCTN1-203ENST00000409240 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.26
DCTN1-203ENST00000409240 ATP1B4Q9UN42 357 aaPredicted RBP22.86■■□□□ 1.25
DCTN1-203ENST00000409240 TRIM26Q12899 539 aaPredicted RBP22.86■■□□□ 1.25
DCTN1-203ENST00000409240 MYT1Q01538 1121 aa22.85■■□□□ 1.25
DCTN1-203ENST00000409240 NEFLP07196 543 aa22.82■■□□□ 1.24
DCTN1-203ENST00000409240 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
DCTN1-203ENST00000409240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
DCTN1-203ENST00000409240 ITGAEP38570 1179 aa22.52■■□□□ 1.2
DCTN1-203ENST00000409240 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
DCTN1-203ENST00000409240 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
DCTN1-203ENST00000409240 DIEXFQ68CQ4 756 aaKnown RBP22.39■■□□□ 1.17
DCTN1-203ENST00000409240 GTF3C3Q9Y5Q9 886 aa22.34■■□□□ 1.17
DCTN1-203ENST00000409240 POLR3GLQ9BT43 218 aa22.29■■□□□ 1.16
DCTN1-203ENST00000409240 BCANQ96GW7 911 aa22.21■■□□□ 1.15
DCTN1-203ENST00000409240 DAXXQ9UER7 740 aaPredicted RBP22.05■■□□□ 1.12
DCTN1-203ENST00000409240 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
DCTN1-203ENST00000409240 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
DCTN1-203ENST00000409240 NEUROD1Q13562 356 aa21.76■■□□□ 1.07
DCTN1-203ENST00000409240 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
DCTN1-203ENST00000409240 ZNF316A6NFI3 1004 aaPredicted RBP21.66■■□□□ 1.06
DCTN1-203ENST00000409240 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
DCTN1-203ENST00000409240 SCAF1Q9H7N4 1312 aaKnown RBP21.57■■□□□ 1.04
DCTN1-203ENST00000409240 MYT1LQ9UL68 1186 aa21.54■■□□□ 1.04
DCTN1-203ENST00000409240 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.04
DCTN1-203ENST00000409240 SLC4A1APQ9BWU0 796 aaKnown RBP21.49■■□□□ 1.03
DCTN1-203ENST00000409240 ANP32CO43423 234 aa21.45■■□□□ 1.02
DCTN1-203ENST00000409240 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
DCTN1-203ENST00000409240 ZNF326Q5BKZ1 582 aaKnown RBP21.43■■□□□ 1.02
DCTN1-203ENST00000409240 FKBP8Q14318 412 aa21.39■■□□□ 1.01
DCTN1-203ENST00000409240 BCL11AQ9H165 835 aa21.34■■□□□ 1.01
DCTN1-203ENST00000409240 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
DCTN1-203ENST00000409240 EIF5BO60841 1220 aaKnown RBP21.32■■□□□ 1
DCTN1-203ENST00000409240 DDX10Q13206 875 aaKnown RBP21.18■□□□□ 0.98
DCTN1-203ENST00000409240 MIER1Q8N108 512 aa21.17■□□□□ 0.98
DCTN1-203ENST00000409240 NBR1Q14596 966 aa21.15■□□□□ 0.98
DCTN1-203ENST00000409240 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
DCTN1-203ENST00000409240 ANP32AP39687 249 aaKnown RBP21.13■□□□□ 0.97
DCTN1-203ENST00000409240 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
DCTN1-203ENST00000409240 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
DCTN1-203ENST00000409240 IRX6P78412 446 aaPredicted RBP21.09■□□□□ 0.97
DCTN1-203ENST00000409240 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.965e-6■□□□□ 9.1
DCTN1-203ENST00000409240 SALL2Q9Y467 1007 aaPredicted RBP21.05■□□□□ 0.96
DCTN1-203ENST00000409240 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
DCTN1-203ENST00000409240 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
DCTN1-203ENST00000409240 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
DCTN1-203ENST00000409240 ARXQ96QS3 562 aa20.95■□□□□ 0.94
DCTN1-203ENST00000409240 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
DCTN1-203ENST00000409240 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
DCTN1-203ENST00000409240 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
DCTN1-203ENST00000409240 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
DCTN1-203ENST00000409240 ZBTB47Q9UFB7 747 aaPredicted RBP20.79■□□□□ 0.92
DCTN1-203ENST00000409240 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
DCTN1-203ENST00000409240 SLC24A1O60721 1099 aa20.75■□□□□ 0.91
DCTN1-203ENST00000409240 ZNF777Q9ULD5 760 aaPredicted RBP20.72■□□□□ 0.91
DCTN1-203ENST00000409240 TONSLQ96HA7 1378 aa20.72■□□□□ 0.91
DCTN1-203ENST00000409240 ANP32EQ9BTT0 268 aa20.7■□□□□ 0.9
DCTN1-203ENST00000409240 FBLN2P98095 1184 aa20.7■□□□□ 0.9
DCTN1-203ENST00000409240 MRS2Q9HD23 443 aa20.68■□□□□ 0.9
DCTN1-203ENST00000409240 RTN4Q9NQC3 1192 aaKnown RBP20.65■□□□□ 0.9
DCTN1-203ENST00000409240 CHIC2Q9UKJ5 165 aa20.65■□□□□ 0.9
DCTN1-203ENST00000409240 ABCC9O60706 1549 aa20.64■□□□□ 0.89
DCTN1-203ENST00000409240 HSP90AA1P07900 732 aaKnown RBP20.64■□□□□ 0.89
DCTN1-203ENST00000409240 TMC1Q8TDI8 760 aa20.62■□□□□ 0.89
DCTN1-203ENST00000409240 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
DCTN1-203ENST00000409240 ANP32BQ92688 251 aaKnown RBP20.49■□□□□ 0.87
DCTN1-203ENST00000409240 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
DCTN1-203ENST00000409240 KDM2AQ9Y2K7 1162 aa20.47■□□□□ 0.87
DCTN1-203ENST00000409240 NEFMP07197 916 aa20.44■□□□□ 0.86
DCTN1-203ENST00000409240 GLIPR1L2Q4G1C9 344 aa20.43■□□□□ 0.86
DCTN1-203ENST00000409240 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
DCTN1-203ENST00000409240 CHGAP10645 457 aaKnown RBP20.38■□□□□ 0.85
DCTN1-203ENST00000409240 B4GALNT3Q6L9W6 998 aa20.35■□□□□ 0.85
DCTN1-203ENST00000409240 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.34■□□□□ 0.85
DCTN1-203ENST00000409240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.32■□□□□ 0.847e-7■■■□□ 17.3
DCTN1-203ENST00000409240 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
DCTN1-203ENST00000409240 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
DCTN1-203ENST00000409240 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
DCTN1-203ENST00000409240 EIF4G2P78344 907 aaKnown RBP eCLIP20.29■□□□□ 0.84
DCTN1-203ENST00000409240 WDR43Q15061 677 aaKnown RBP eCLIP20.26■□□□□ 0.83
DCTN1-203ENST00000409240 RBM19Q9Y4C8 960 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms