RNA–Protein interactions for RNA: ENST00000628224.2

DCTN1-226, Transcript of dynactin subunit 1, humanhuman

TSL 5 BASIC

Gene DCTN1, Length 4,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-226ENST00000628224 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
DCTN1-226ENST00000628224 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
DCTN1-226ENST00000628224 NISCHQ9Y2I1 1504 aa16.72■□□□□ 0.27
DCTN1-226ENST00000628224 MYT1Q01538 1121 aa16.71■□□□□ 0.27
DCTN1-226ENST00000628224 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
DCTN1-226ENST00000628224 SHROOM4Q9ULL8 1493 aa16.25■□□□□ 0.19
DCTN1-226ENST00000628224 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
DCTN1-226ENST00000628224 HRCP23327 699 aa15.9■□□□□ 0.14
DCTN1-226ENST00000628224 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
DCTN1-226ENST00000628224 ZEB1P37275 1124 aaPredicted RBP15.77■□□□□ 0.11
DCTN1-226ENST00000628224 CENPBP07199 599 aaPredicted RBP15.66■□□□□ 0.1
DCTN1-226ENST00000628224 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
DCTN1-226ENST00000628224 TTBK1Q5TCY1 1321 aaPredicted RBP15.55■□□□□ 0.08
DCTN1-226ENST00000628224 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
DCTN1-226ENST00000628224 TRIM26Q12899 539 aaPredicted RBP15.21■□□□□ 0.03
DCTN1-226ENST00000628224 RANGAP1P46060 587 aaPredicted RBP15.12■□□□□ 0.01
DCTN1-226ENST00000628224 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
DCTN1-226ENST00000628224 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
DCTN1-226ENST00000628224 CCER1Q8TC90 406 aaPredicted RBP15.01□□□□□ -0.01
DCTN1-226ENST00000628224 ERICH6Q7L0X2 663 aa15□□□□□ -0.01
DCTN1-226ENST00000628224 ACIN1Q9UKV3 1341 aaKnown RBP14.95□□□□□ -0.02
DCTN1-226ENST00000628224 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
DCTN1-226ENST00000628224 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
DCTN1-226ENST00000628224 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
DCTN1-226ENST00000628224 YTHDC1Q96MU7 727 aaKnown RBP14.87□□□□□ -0.03
DCTN1-226ENST00000628224 APLP2Q06481 763 aa14.85□□□□□ -0.03
DCTN1-226ENST00000628224 DIEXFQ68CQ4 756 aaKnown RBP14.76□□□□□ -0.05
DCTN1-226ENST00000628224 UBTFP17480 764 aaKnown RBP14.71□□□□□ -0.05
DCTN1-226ENST00000628224 NEFLP07196 543 aa14.71□□□□□ -0.05
DCTN1-226ENST00000628224 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.06
DCTN1-226ENST00000628224 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.06
DCTN1-226ENST00000628224 CLSPNQ9HAW4 1339 aa14.67□□□□□ -0.06
DCTN1-226ENST00000628224 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
DCTN1-226ENST00000628224 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
DCTN1-226ENST00000628224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
DCTN1-226ENST00000628224 MYT1LQ9UL68 1186 aa14.49□□□□□ -0.09
DCTN1-226ENST00000628224 ANP32EQ9BTT0 268 aa14.43□□□□□ -0.1
DCTN1-226ENST00000628224 BCL11AQ9H165 835 aa14.42□□□□□ -0.1
DCTN1-226ENST00000628224 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.15e-6■□□□□ 9.1
DCTN1-226ENST00000628224 ITGAEP38570 1179 aa14.39□□□□□ -0.11
DCTN1-226ENST00000628224 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
DCTN1-226ENST00000628224 ABCC9O60706 1549 aa14.36□□□□□ -0.11
DCTN1-226ENST00000628224 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.12
DCTN1-226ENST00000628224 RTL5Q5HYW3 569 aaPredicted RBP14.31□□□□□ -0.12
DCTN1-226ENST00000628224 HNRNPUL2Q1KMD3 747 aaKnown RBP14.3□□□□□ -0.12
DCTN1-226ENST00000628224 BCANQ96GW7 911 aa14.16□□□□□ -0.14
DCTN1-226ENST00000628224 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
DCTN1-226ENST00000628224 CNGB1Q14028 1251 aaPredicted RBP14.15□□□□□ -0.14
DCTN1-226ENST00000628224 MIER1Q8N108 512 aa14.08□□□□□ -0.15
DCTN1-226ENST00000628224 GLIPR1L2Q4G1C9 344 aa14.04□□□□□ -0.16
DCTN1-226ENST00000628224 POLR3GLQ9BT43 218 aa14.03□□□□□ -0.16
DCTN1-226ENST00000628224 DAXXQ9UER7 740 aaPredicted RBP14□□□□□ -0.17
DCTN1-226ENST00000628224 FKBP8Q14318 412 aa13.93□□□□□ -0.18
DCTN1-226ENST00000628224 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
DCTN1-226ENST00000628224 SUPT16HQ9Y5B9 1047 aaKnown RBP13.9□□□□□ -0.18
DCTN1-226ENST00000628224 ZCCHC6Q5VYS8 1495 aaKnown RBP13.9□□□□□ -0.19
DCTN1-226ENST00000628224 ANP32AP39687 249 aaKnown RBP13.88□□□□□ -0.19
DCTN1-226ENST00000628224 FAM50AQ14320 339 aaKnown RBP13.88□□□□□ -0.19
DCTN1-226ENST00000628224 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
DCTN1-226ENST00000628224 EIF5BO60841 1220 aaKnown RBP13.87□□□□□ -0.19
DCTN1-226ENST00000628224 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
DCTN1-226ENST00000628224 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
DCTN1-226ENST00000628224 ANP32CO43423 234 aa13.82□□□□□ -0.2
DCTN1-226ENST00000628224 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
DCTN1-226ENST00000628224 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
DCTN1-226ENST00000628224 FBLN2P98095 1184 aa13.76□□□□□ -0.21
DCTN1-226ENST00000628224 SCRIBQ14160 1630 aa13.73□□□□□ -0.21
DCTN1-226ENST00000628224 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
DCTN1-226ENST00000628224 DEKP35659 375 aaKnown RBP13.71□□□□□ -0.21
DCTN1-226ENST00000628224 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
DCTN1-226ENST00000628224 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
DCTN1-226ENST00000628224 NBR1Q14596 966 aa13.68□□□□□ -0.22
DCTN1-226ENST00000628224 ZNF326Q5BKZ1 582 aaKnown RBP13.66□□□□□ -0.22
DCTN1-226ENST00000628224 RB1CC1Q8TDY2 1594 aa13.63□□□□□ -0.23
DCTN1-226ENST00000628224 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
DCTN1-226ENST00000628224 NACADO15069 1562 aa13.59□□□□□ -0.23
DCTN1-226ENST00000628224 DDX10Q13206 875 aaKnown RBP13.58□□□□□ -0.23
DCTN1-226ENST00000628224 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.23
DCTN1-226ENST00000628224 IRX6P78412 446 aaPredicted RBP13.55□□□□□ -0.24
DCTN1-226ENST00000628224 PPM1GO15355 546 aaPredicted RBP13.53□□□□□ -0.24
DCTN1-226ENST00000628224 FANCIQ9NVI1 1328 aa13.51□□□□□ -0.25
DCTN1-226ENST00000628224 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
DCTN1-226ENST00000628224 CEP162Q5TB80 1403 aa13.49□□□□□ -0.25
DCTN1-226ENST00000628224 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
DCTN1-226ENST00000628224 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
DCTN1-226ENST00000628224 PPP4R2Q9NY27 417 aa13.47□□□□□ -0.25
DCTN1-226ENST00000628224 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.25
DCTN1-226ENST00000628224 NEFMP07197 916 aa13.46□□□□□ -0.25
DCTN1-226ENST00000628224 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
DCTN1-226ENST00000628224 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
DCTN1-226ENST00000628224 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
DCTN1-226ENST00000628224 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
DCTN1-226ENST00000628224 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
DCTN1-226ENST00000628224 CHIC2Q9UKJ5 165 aa13.41□□□□□ -0.26
DCTN1-226ENST00000628224 CCER2I3L3R5 266 aa13.38□□□□□ -0.27
DCTN1-226ENST00000628224 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
DCTN1-226ENST00000628224 USP35Q9P2H5 1018 aa13.35□□□□□ -0.27
DCTN1-226ENST00000628224 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
DCTN1-226ENST00000628224 ANP32BQ92688 251 aaKnown RBP13.3□□□□□ -0.28
DCTN1-226ENST00000628224 ANO8Q9HCE9 1232 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms