RNA–Protein interactions for RNA: ENST00000561454.1

TCF12-227, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-227ENST00000561454 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
TCF12-227ENST00000561454 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
TCF12-227ENST00000561454 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
TCF12-227ENST00000561454 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
TCF12-227ENST00000561454 FOXD1Q16676 465 aa20.54■□□□□ 0.88
TCF12-227ENST00000561454 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
TCF12-227ENST00000561454 MSH5O43196 834 aa19.28■□□□□ 0.68
TCF12-227ENST00000561454 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
TCF12-227ENST00000561454 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
TCF12-227ENST00000561454 ADRA2BP18089 450 aa19.12■□□□□ 0.65
TCF12-227ENST00000561454 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
TCF12-227ENST00000561454 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
TCF12-227ENST00000561454 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
TCF12-227ENST00000561454 DMRT2Q9Y5R5 561 aa17.52■□□□□ 0.4
TCF12-227ENST00000561454 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
TCF12-227ENST00000561454 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
TCF12-227ENST00000561454 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
TCF12-227ENST00000561454 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
TCF12-227ENST00000561454 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
TCF12-227ENST00000561454 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
TCF12-227ENST00000561454 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.23
TCF12-227ENST00000561454 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
TCF12-227ENST00000561454 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
TCF12-227ENST00000561454 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
TCF12-227ENST00000561454 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
TCF12-227ENST00000561454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.163e-6■□□□□ 11.3
TCF12-227ENST00000561454 KCNA4P22459 653 aa16.01■□□□□ 0.15
TCF12-227ENST00000561454 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
TCF12-227ENST00000561454 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
TCF12-227ENST00000561454 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
TCF12-227ENST00000561454 CAPN15O75808 1086 aa15.44■□□□□ 0.06
TCF12-227ENST00000561454 APLP2Q06481 763 aa15.39■□□□□ 0.05
TCF12-227ENST00000561454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
TCF12-227ENST00000561454 DSG3P32926 999 aa15.37■□□□□ 0.05
TCF12-227ENST00000561454 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
TCF12-227ENST00000561454 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
TCF12-227ENST00000561454 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
TCF12-227ENST00000561454 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
TCF12-227ENST00000561454 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
TCF12-227ENST00000561454 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
TCF12-227ENST00000561454 ABCB7O75027 752 aa15.05■□□□□ -0
TCF12-227ENST00000561454 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
TCF12-227ENST00000561454 POLA2Q14181 598 aa14.79□□□□□ -0.04
TCF12-227ENST00000561454 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
TCF12-227ENST00000561454 ZBTB22O15209 634 aa14.7□□□□□ -0.06
TCF12-227ENST00000561454 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
TCF12-227ENST00000561454 POTEHQ6S545 545 aa14.67□□□□□ -0.06
TCF12-227ENST00000561454 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
TCF12-227ENST00000561454 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
TCF12-227ENST00000561454 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
TCF12-227ENST00000561454 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
TCF12-227ENST00000561454 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
TCF12-227ENST00000561454 FBLN2P98095 1184 aa14.22□□□□□ -0.13
TCF12-227ENST00000561454 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
TCF12-227ENST00000561454 SPDYE2BA6NHP3 402 aa14.12□□□□□ -0.15
TCF12-227ENST00000561454 SPDYE6P0CI01 402 aa14.12□□□□□ -0.15
TCF12-227ENST00000561454 SPDYE2Q495Y8 402 aa14.12□□□□□ -0.15
TCF12-227ENST00000561454 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
TCF12-227ENST00000561454 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
TCF12-227ENST00000561454 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
TCF12-227ENST00000561454 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
TCF12-227ENST00000561454 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
TCF12-227ENST00000561454 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
TCF12-227ENST00000561454 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
TCF12-227ENST00000561454 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
TCF12-227ENST00000561454 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
TCF12-227ENST00000561454 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
TCF12-227ENST00000561454 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
TCF12-227ENST00000561454 HAX1O00165 279 aa13.71□□□□□ -0.21
TCF12-227ENST00000561454 PABPN1Q86U42 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
TCF12-227ENST00000561454 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
TCF12-227ENST00000561454 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
TCF12-227ENST00000561454 EVX2Q03828 476 aa13.5□□□□□ -0.25
TCF12-227ENST00000561454 C19orf67A6NJJ6 358 aa13.49□□□□□ -0.25
TCF12-227ENST00000561454 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
TCF12-227ENST00000561454 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
TCF12-227ENST00000561454 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
TCF12-227ENST00000561454 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
TCF12-227ENST00000561454 GABBR2O75899 941 aa13.26□□□□□ -0.29
TCF12-227ENST00000561454 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
TCF12-227ENST00000561454 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
TCF12-227ENST00000561454 CLCN6P51797 869 aa13.18□□□□□ -0.3
TCF12-227ENST00000561454 PROM2Q8N271 834 aa13.16□□□□□ -0.3
TCF12-227ENST00000561454 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
TCF12-227ENST00000561454 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
TCF12-227ENST00000561454 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
TCF12-227ENST00000561454 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
TCF12-227ENST00000561454 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
TCF12-227ENST00000561454 POTEIP0CG38 1075 aa12.96□□□□□ -0.33
TCF12-227ENST00000561454 LHX8Q68G74 356 aa12.91□□□□□ -0.34
TCF12-227ENST00000561454 DCBLD2Q96PD2 775 aa12.91□□□□□ -0.34
TCF12-227ENST00000561454 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
TCF12-227ENST00000561454 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
TCF12-227ENST00000561454 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
TCF12-227ENST00000561454 MIER1Q8N108 512 aa12.78□□□□□ -0.36
TCF12-227ENST00000561454 FKBP8Q14318 412 aa12.76□□□□□ -0.37
TCF12-227ENST00000561454 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
TCF12-227ENST00000561454 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
TCF12-227ENST00000561454 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
TCF12-227ENST00000561454 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms