RNA–Protein interactions for RNA: ENST00000638947.1

SETD2-209, Transcript of SET domain containing 2, humanhuman

TSL 5 BASIC

Gene SETD2, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD2-209ENST00000638947 NISCHQ9Y2I1 1504 aa26.88■■□□□ 1.89
SETD2-209ENST00000638947 CCDC180Q9P1Z9 1646 aa23.75■■□□□ 1.39
SETD2-209ENST00000638947 ABCC9O60706 1549 aa23.09■■□□□ 1.29
SETD2-209ENST00000638947 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
SETD2-209ENST00000638947 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
SETD2-209ENST00000638947 NACADO15069 1562 aa22.29■■□□□ 1.16
SETD2-209ENST00000638947 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
SETD2-209ENST00000638947 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
SETD2-209ENST00000638947 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.15
SETD2-209ENST00000638947 SCRIBQ14160 1630 aa21.77■■□□□ 1.07
SETD2-209ENST00000638947 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
SETD2-209ENST00000638947 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
SETD2-209ENST00000638947 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
SETD2-209ENST00000638947 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
SETD2-209ENST00000638947 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
SETD2-209ENST00000638947 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
SETD2-209ENST00000638947 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
SETD2-209ENST00000638947 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
SETD2-209ENST00000638947 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
SETD2-209ENST00000638947 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
SETD2-209ENST00000638947 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
SETD2-209ENST00000638947 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
SETD2-209ENST00000638947 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
SETD2-209ENST00000638947 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
SETD2-209ENST00000638947 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
SETD2-209ENST00000638947 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
SETD2-209ENST00000638947 WIZO95785 1651 aa20.53■□□□□ 0.88
SETD2-209ENST00000638947 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
SETD2-209ENST00000638947 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
SETD2-209ENST00000638947 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
SETD2-209ENST00000638947 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
SETD2-209ENST00000638947 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
SETD2-209ENST00000638947 NESP48681 1621 aa20.04■□□□□ 0.8
SETD2-209ENST00000638947 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
SETD2-209ENST00000638947 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
SETD2-209ENST00000638947 CFTRP13569 1480 aa19.93■□□□□ 0.78
SETD2-209ENST00000638947 ERCC6Q03468 1493 aa19.89■□□□□ 0.78
SETD2-209ENST00000638947 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
SETD2-209ENST00000638947 KIF21AQ7Z4S6 1674 aa19.79■□□□□ 0.76
SETD2-209ENST00000638947 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
SETD2-209ENST00000638947 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
SETD2-209ENST00000638947 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
SETD2-209ENST00000638947 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
SETD2-209ENST00000638947 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
SETD2-209ENST00000638947 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
SETD2-209ENST00000638947 WDR62O43379 1518 aa19.55■□□□□ 0.72
SETD2-209ENST00000638947 CUX2O14529 1486 aa19.53■□□□□ 0.72
SETD2-209ENST00000638947 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
SETD2-209ENST00000638947 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
SETD2-209ENST00000638947 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
SETD2-209ENST00000638947 CUX1P39880 1505 aa19.44■□□□□ 0.7
SETD2-209ENST00000638947 WRNQ14191 1432 aaPredicted RBP eCLIP19.43■□□□□ 0.7
SETD2-209ENST00000638947 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
SETD2-209ENST00000638947 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
SETD2-209ENST00000638947 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
SETD2-209ENST00000638947 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
SETD2-209ENST00000638947 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
SETD2-209ENST00000638947 IFT140Q96RY7 1462 aa19.3■□□□□ 0.68
SETD2-209ENST00000638947 SOGA1O94964 1423 aa19.29■□□□□ 0.68
SETD2-209ENST00000638947 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
SETD2-209ENST00000638947 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
SETD2-209ENST00000638947 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
SETD2-209ENST00000638947 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
SETD2-209ENST00000638947 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
SETD2-209ENST00000638947 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.667e-7■■■■■ 35.4
SETD2-209ENST00000638947 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
SETD2-209ENST00000638947 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
SETD2-209ENST00000638947 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
SETD2-209ENST00000638947 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
SETD2-209ENST00000638947 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
SETD2-209ENST00000638947 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
SETD2-209ENST00000638947 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
SETD2-209ENST00000638947 KIF27Q86VH2 1401 aa19■□□□□ 0.63
SETD2-209ENST00000638947 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
SETD2-209ENST00000638947 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
SETD2-209ENST00000638947 FBLN2P98095 1184 aa18.94■□□□□ 0.62
SETD2-209ENST00000638947 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
SETD2-209ENST00000638947 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
SETD2-209ENST00000638947 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
SETD2-209ENST00000638947 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
SETD2-209ENST00000638947 IGF1RP08069 1367 aa18.89■□□□□ 0.61
SETD2-209ENST00000638947 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
SETD2-209ENST00000638947 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
SETD2-209ENST00000638947 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
SETD2-209ENST00000638947 CHD1O14646 1710 aa18.84■□□□□ 0.61
SETD2-209ENST00000638947 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.61
SETD2-209ENST00000638947 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
SETD2-209ENST00000638947 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
SETD2-209ENST00000638947 CUL7Q14999 1698 aa18.79■□□□□ 0.6
SETD2-209ENST00000638947 EEA1Q15075 1411 aa18.78■□□□□ 0.6
SETD2-209ENST00000638947 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
SETD2-209ENST00000638947 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.59
SETD2-209ENST00000638947 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
SETD2-209ENST00000638947 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
SETD2-209ENST00000638947 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
SETD2-209ENST00000638947 NUP160Q12769 1436 aa18.66■□□□□ 0.58
SETD2-209ENST00000638947 CEP170Q5SW79 1584 aa18.66■□□□□ 0.58
SETD2-209ENST00000638947 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
SETD2-209ENST00000638947 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
SETD2-209ENST00000638947 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms