RNA–Protein interactions for RNA: ENST00000389721.9

SPTB-203, Transcript of spectrin beta, erythrocytic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTB, Length 6,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-203ENST00000389721 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
SPTB-203ENST00000389721 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
SPTB-203ENST00000389721 EHMT2Q96KQ7 1210 aa20.74■□□□□ 0.91
SPTB-203ENST00000389721 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
SPTB-203ENST00000389721 NISCHQ9Y2I1 1504 aa20.29■□□□□ 0.84
SPTB-203ENST00000389721 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
SPTB-203ENST00000389721 APLP2Q06481 763 aa19.98■□□□□ 0.79
SPTB-203ENST00000389721 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
SPTB-203ENST00000389721 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
SPTB-203ENST00000389721 RANGAP1P46060 587 aaPredicted RBP19.77■□□□□ 0.76
SPTB-203ENST00000389721 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
SPTB-203ENST00000389721 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.72
SPTB-203ENST00000389721 ERICH6Q7L0X2 663 aa19.3■□□□□ 0.68
SPTB-203ENST00000389721 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
SPTB-203ENST00000389721 CCER1Q8TC90 406 aaPredicted RBP19.25■□□□□ 0.67
SPTB-203ENST00000389721 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
SPTB-203ENST00000389721 CENPBP07199 599 aaPredicted RBP19.09■□□□□ 0.65
SPTB-203ENST00000389721 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
SPTB-203ENST00000389721 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
SPTB-203ENST00000389721 ZEB1P37275 1124 aaPredicted RBP18.95■□□□□ 0.62
SPTB-203ENST00000389721 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
SPTB-203ENST00000389721 NEFLP07196 543 aa18.87■□□□□ 0.61
SPTB-203ENST00000389721 POLR3GLQ9BT43 218 aa18.79■□□□□ 0.6
SPTB-203ENST00000389721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
SPTB-203ENST00000389721 ITGAEP38570 1179 aa18.78■□□□□ 0.6
SPTB-203ENST00000389721 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
SPTB-203ENST00000389721 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
SPTB-203ENST00000389721 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
SPTB-203ENST00000389721 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
SPTB-203ENST00000389721 MYT1Q01538 1121 aa18.47■□□□□ 0.55
SPTB-203ENST00000389721 DAXXQ9UER7 740 aaPredicted RBP18.46■□□□□ 0.55
SPTB-203ENST00000389721 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
SPTB-203ENST00000389721 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
SPTB-203ENST00000389721 HRCP23327 699 aa18.26■□□□□ 0.51
SPTB-203ENST00000389721 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
SPTB-203ENST00000389721 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
SPTB-203ENST00000389721 CLSPNQ9HAW4 1339 aa18.12■□□□□ 0.49
SPTB-203ENST00000389721 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
SPTB-203ENST00000389721 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
SPTB-203ENST00000389721 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
SPTB-203ENST00000389721 ZNF326Q5BKZ1 582 aaKnown RBP18.02■□□□□ 0.48
SPTB-203ENST00000389721 FBLN2P98095 1184 aa18■□□□□ 0.47
SPTB-203ENST00000389721 ABCC9O60706 1549 aa17.99■□□□□ 0.47
SPTB-203ENST00000389721 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
SPTB-203ENST00000389721 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
SPTB-203ENST00000389721 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
SPTB-203ENST00000389721 BCANQ96GW7 911 aa17.91■□□□□ 0.46
SPTB-203ENST00000389721 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
SPTB-203ENST00000389721 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
SPTB-203ENST00000389721 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
SPTB-203ENST00000389721 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
SPTB-203ENST00000389721 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
SPTB-203ENST00000389721 ANP32CO43423 234 aa17.72■□□□□ 0.43
SPTB-203ENST00000389721 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
SPTB-203ENST00000389721 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
SPTB-203ENST00000389721 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
SPTB-203ENST00000389721 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
SPTB-203ENST00000389721 NEFMP07197 916 aa17.57■□□□□ 0.4
SPTB-203ENST00000389721 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
SPTB-203ENST00000389721 ESF1Q9H501 851 aaKnown RBP17.47■□□□□ 0.39
SPTB-203ENST00000389721 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
SPTB-203ENST00000389721 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
SPTB-203ENST00000389721 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
SPTB-203ENST00000389721 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
SPTB-203ENST00000389721 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
SPTB-203ENST00000389721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.3■□□□□ 0.366e-6■□□□□ 8.3
SPTB-203ENST00000389721 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
SPTB-203ENST00000389721 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
SPTB-203ENST00000389721 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.35
SPTB-203ENST00000389721 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
SPTB-203ENST00000389721 FAM9BQ8IZU0 186 aa17.24■□□□□ 0.35
SPTB-203ENST00000389721 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
SPTB-203ENST00000389721 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
SPTB-203ENST00000389721 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
SPTB-203ENST00000389721 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
SPTB-203ENST00000389721 FKBP8Q14318 412 aa17.2■□□□□ 0.34
SPTB-203ENST00000389721 A0A0G2JS52 829 aa17.19■□□□□ 0.34
SPTB-203ENST00000389721 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
SPTB-203ENST00000389721 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPTB-203ENST00000389721 KDM2AQ9Y2K7 1162 aa17.15■□□□□ 0.34
SPTB-203ENST00000389721 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
SPTB-203ENST00000389721 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
SPTB-203ENST00000389721 ANP32BQ92688 251 aaKnown RBP17.07■□□□□ 0.32
SPTB-203ENST00000389721 ARXQ96QS3 562 aa17.07■□□□□ 0.32
SPTB-203ENST00000389721 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
SPTB-203ENST00000389721 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPTB-203ENST00000389721 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
SPTB-203ENST00000389721 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
SPTB-203ENST00000389721 HIRIP3Q9BW71 556 aaPredicted RBP17.03■□□□□ 0.32
SPTB-203ENST00000389721 EIF5BO60841 1220 aaKnown RBP16.99■□□□□ 0.31
SPTB-203ENST00000389721 IRX6P78412 446 aaPredicted RBP16.99■□□□□ 0.31
SPTB-203ENST00000389721 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
SPTB-203ENST00000389721 NBR1Q14596 966 aa16.97■□□□□ 0.31
SPTB-203ENST00000389721 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
SPTB-203ENST00000389721 CCDC136Q96JN2 1154 aa16.96■□□□□ 0.31
SPTB-203ENST00000389721 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
SPTB-203ENST00000389721 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
SPTB-203ENST00000389721 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
SPTB-203ENST00000389721 MRS2Q9HD23 443 aa16.93■□□□□ 0.3
SPTB-203ENST00000389721 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms