RNA–Protein interactions for RNA: ENST00000409438.5

DCTN1-204, Transcript of dynactin subunit 1, humanhuman

TSL 1 (best) BASIC

Gene DCTN1, Length 4,145 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-204ENST00000409438 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
DCTN1-204ENST00000409438 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
DCTN1-204ENST00000409438 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
DCTN1-204ENST00000409438 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.49
DCTN1-204ENST00000409438 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
DCTN1-204ENST00000409438 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
DCTN1-204ENST00000409438 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
DCTN1-204ENST00000409438 PPARGC1BQ86YN6 1023 aaKnown RBP17.02■□□□□ 0.32
DCTN1-204ENST00000409438 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
DCTN1-204ENST00000409438 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
DCTN1-204ENST00000409438 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
DCTN1-204ENST00000409438 HRCP23327 699 aa16.83■□□□□ 0.28
DCTN1-204ENST00000409438 TRIM41Q8WV44 630 aa16.77■□□□□ 0.27
DCTN1-204ENST00000409438 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
DCTN1-204ENST00000409438 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
DCTN1-204ENST00000409438 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
DCTN1-204ENST00000409438 APLP2Q06481 763 aa16.59■□□□□ 0.25
DCTN1-204ENST00000409438 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
DCTN1-204ENST00000409438 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
DCTN1-204ENST00000409438 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
DCTN1-204ENST00000409438 TRIM26Q12899 539 aaPredicted RBP16.32■□□□□ 0.2
DCTN1-204ENST00000409438 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.2
DCTN1-204ENST00000409438 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
DCTN1-204ENST00000409438 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
DCTN1-204ENST00000409438 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
DCTN1-204ENST00000409438 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
DCTN1-204ENST00000409438 ABCC9O60706 1549 aa16.12■□□□□ 0.17
DCTN1-204ENST00000409438 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
DCTN1-204ENST00000409438 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
DCTN1-204ENST00000409438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
DCTN1-204ENST00000409438 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
DCTN1-204ENST00000409438 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
DCTN1-204ENST00000409438 ITGAEP38570 1179 aa15.99■□□□□ 0.15
DCTN1-204ENST00000409438 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
DCTN1-204ENST00000409438 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.135e-6■□□□□ 9.1
DCTN1-204ENST00000409438 GTF3C3Q9Y5Q9 886 aa15.81■□□□□ 0.12
DCTN1-204ENST00000409438 NACADO15069 1562 aa15.77■□□□□ 0.12
DCTN1-204ENST00000409438 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
DCTN1-204ENST00000409438 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
DCTN1-204ENST00000409438 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
DCTN1-204ENST00000409438 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
DCTN1-204ENST00000409438 ACIN1Q9UKV3 1341 aaKnown RBP15.64■□□□□ 0.09
DCTN1-204ENST00000409438 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
DCTN1-204ENST00000409438 NEFLP07196 543 aa15.62■□□□□ 0.09
DCTN1-204ENST00000409438 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
DCTN1-204ENST00000409438 ERICH6Q7L0X2 663 aa15.56■□□□□ 0.08
DCTN1-204ENST00000409438 POLR3GLQ9BT43 218 aa15.54■□□□□ 0.08
DCTN1-204ENST00000409438 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
DCTN1-204ENST00000409438 WIZO95785 1651 aa15.48■□□□□ 0.07
DCTN1-204ENST00000409438 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
DCTN1-204ENST00000409438 BAZ1AQ9NRL2 1556 aaPredicted RBP15.47■□□□□ 0.07
DCTN1-204ENST00000409438 P3H3Q8IVL6 736 aa15.38■□□□□ 0.05
DCTN1-204ENST00000409438 ZNF316A6NFI3 1004 aaPredicted RBP15.36■□□□□ 0.05
DCTN1-204ENST00000409438 BCANQ96GW7 911 aa15.33■□□□□ 0.04
DCTN1-204ENST00000409438 MYT1Q01538 1121 aa15.31■□□□□ 0.04
DCTN1-204ENST00000409438 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
DCTN1-204ENST00000409438 ARID3CA6NKF2 412 aa15.27■□□□□ 0.03
DCTN1-204ENST00000409438 TRIM52Q96A61 297 aa15.27■□□□□ 0.03
DCTN1-204ENST00000409438 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
DCTN1-204ENST00000409438 TOP2AP11388 1531 aaKnown RBP15.26■□□□□ 0.03
DCTN1-204ENST00000409438 MYT1LQ9UL68 1186 aa15.24■□□□□ 0.03
DCTN1-204ENST00000409438 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
DCTN1-204ENST00000409438 MIER1Q8N108 512 aa15.21■□□□□ 0.03
DCTN1-204ENST00000409438 SOGA1O94964 1423 aa15.19■□□□□ 0.02
DCTN1-204ENST00000409438 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
DCTN1-204ENST00000409438 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
DCTN1-204ENST00000409438 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
DCTN1-204ENST00000409438 EEA1Q15075 1411 aa15.14■□□□□ 0.01
DCTN1-204ENST00000409438 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
DCTN1-204ENST00000409438 TNIKQ9UKE5 1360 aa15.12■□□□□ 0.01
DCTN1-204ENST00000409438 FBLN2P98095 1184 aa15.11■□□□□ 0.01
DCTN1-204ENST00000409438 ANP32CO43423 234 aa15.08■□□□□ 0
DCTN1-204ENST00000409438 GOLGA3Q08378 1498 aa15.07■□□□□ 0
DCTN1-204ENST00000409438 BAZ1BQ9UIG0 1483 aaKnown RBP15.06■□□□□ 0
DCTN1-204ENST00000409438 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
DCTN1-204ENST00000409438 DDX10Q13206 875 aaKnown RBP15.02□□□□□ -0.01
DCTN1-204ENST00000409438 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
DCTN1-204ENST00000409438 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
DCTN1-204ENST00000409438 CLIP1P30622 1438 aa14.99□□□□□ -0.01
DCTN1-204ENST00000409438 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
DCTN1-204ENST00000409438 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
DCTN1-204ENST00000409438 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
DCTN1-204ENST00000409438 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
DCTN1-204ENST00000409438 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
DCTN1-204ENST00000409438 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
DCTN1-204ENST00000409438 DAXXQ9UER7 740 aaPredicted RBP14.91□□□□□ -0.02
DCTN1-204ENST00000409438 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
DCTN1-204ENST00000409438 FKBP8Q14318 412 aa14.9□□□□□ -0.02
DCTN1-204ENST00000409438 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
DCTN1-204ENST00000409438 HNRNPUQ00839 825 aaKnown RBP eCLIP14.83□□□□□ -0.04
DCTN1-204ENST00000409438 CDK11AQ9UQ88 783 aaPredicted RBP14.81□□□□□ -0.04
DCTN1-204ENST00000409438 CLSPNQ9HAW4 1339 aa14.81□□□□□ -0.04
DCTN1-204ENST00000409438 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
DCTN1-204ENST00000409438 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
DCTN1-204ENST00000409438 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
DCTN1-204ENST00000409438 FAM9BQ8IZU0 186 aa14.8□□□□□ -0.04
DCTN1-204ENST00000409438 SUPT16HQ9Y5B9 1047 aaKnown RBP14.79□□□□□ -0.04
DCTN1-204ENST00000409438 SALL2Q9Y467 1007 aaPredicted RBP14.76□□□□□ -0.05
DCTN1-204ENST00000409438 IRX6P78412 446 aaPredicted RBP14.75□□□□□ -0.05
DCTN1-204ENST00000409438 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms