RNA–Protein interactions for RNA: ENST00000397171.6

SCMH1-208, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-208ENST00000397171 NISCHQ9Y2I1 1504 aa19.34■□□□□ 0.69
SCMH1-208ENST00000397171 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
SCMH1-208ENST00000397171 HRCP23327 699 aa16.72■□□□□ 0.27
SCMH1-208ENST00000397171 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
SCMH1-208ENST00000397171 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
SCMH1-208ENST00000397171 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
SCMH1-208ENST00000397171 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
SCMH1-208ENST00000397171 ABCC9O60706 1549 aa16.32■□□□□ 0.2
SCMH1-208ENST00000397171 ZCCHC6Q5VYS8 1495 aaKnown RBP16.3■□□□□ 0.2
SCMH1-208ENST00000397171 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
SCMH1-208ENST00000397171 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
SCMH1-208ENST00000397171 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
SCMH1-208ENST00000397171 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
SCMH1-208ENST00000397171 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
SCMH1-208ENST00000397171 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
SCMH1-208ENST00000397171 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
SCMH1-208ENST00000397171 MYT1Q01538 1121 aa15.68■□□□□ 0.1
SCMH1-208ENST00000397171 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
SCMH1-208ENST00000397171 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
SCMH1-208ENST00000397171 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
SCMH1-208ENST00000397171 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
SCMH1-208ENST00000397171 NACADO15069 1562 aa15.51■□□□□ 0.07
SCMH1-208ENST00000397171 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
SCMH1-208ENST00000397171 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
SCMH1-208ENST00000397171 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCMH1-208ENST00000397171 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
SCMH1-208ENST00000397171 GTF3C3Q9Y5Q9 886 aa15.31■□□□□ 0.04
SCMH1-208ENST00000397171 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
SCMH1-208ENST00000397171 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
SCMH1-208ENST00000397171 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
SCMH1-208ENST00000397171 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
SCMH1-208ENST00000397171 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
SCMH1-208ENST00000397171 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
SCMH1-208ENST00000397171 MROH2BQ7Z745 1585 aa15.1■□□□□ 0.01
SCMH1-208ENST00000397171 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
SCMH1-208ENST00000397171 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
SCMH1-208ENST00000397171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
SCMH1-208ENST00000397171 CCER1Q8TC90 406 aaPredicted RBP15.01□□□□□ -0.01
SCMH1-208ENST00000397171 WIZO95785 1651 aa15.01□□□□□ -0.01
SCMH1-208ENST00000397171 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
SCMH1-208ENST00000397171 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
SCMH1-208ENST00000397171 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.04
SCMH1-208ENST00000397171 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
SCMH1-208ENST00000397171 TTBK1Q5TCY1 1321 aaPredicted RBP14.74□□□□□ -0.05
SCMH1-208ENST00000397171 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
SCMH1-208ENST00000397171 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.05
SCMH1-208ENST00000397171 MIER1Q8N108 512 aa14.71□□□□□ -0.05
SCMH1-208ENST00000397171 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
SCMH1-208ENST00000397171 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
SCMH1-208ENST00000397171 BCL11AQ9H165 835 aa14.67□□□□□ -0.06
SCMH1-208ENST00000397171 TOP2AP11388 1531 aaKnown RBP14.67□□□□□ -0.06
SCMH1-208ENST00000397171 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
SCMH1-208ENST00000397171 ANP32EQ9BTT0 268 aa14.63□□□□□ -0.07
SCMH1-208ENST00000397171 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
SCMH1-208ENST00000397171 WRNQ14191 1432 aaPredicted RBP eCLIP14.6□□□□□ -0.07
SCMH1-208ENST00000397171 SUPT16HQ9Y5B9 1047 aaKnown RBP14.56□□□□□ -0.08
SCMH1-208ENST00000397171 SOGA1O94964 1423 aa14.56□□□□□ -0.08
SCMH1-208ENST00000397171 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
SCMH1-208ENST00000397171 TSHZ2Q9NRE2 1034 aa14.54□□□□□ -0.08
SCMH1-208ENST00000397171 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
SCMH1-208ENST00000397171 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
SCMH1-208ENST00000397171 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
SCMH1-208ENST00000397171 CEP162Q5TB80 1403 aa14.46□□□□□ -0.09
SCMH1-208ENST00000397171 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
SCMH1-208ENST00000397171 RANGAP1P46060 587 aaPredicted RBP14.42□□□□□ -0.1
SCMH1-208ENST00000397171 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
SCMH1-208ENST00000397171 TNIKQ9UKE5 1360 aa14.35□□□□□ -0.11
SCMH1-208ENST00000397171 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
SCMH1-208ENST00000397171 PEG3Q9GZU2 1588 aa14.35□□□□□ -0.11
SCMH1-208ENST00000397171 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
SCMH1-208ENST00000397171 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
SCMH1-208ENST00000397171 EEA1Q15075 1411 aa14.25□□□□□ -0.13
SCMH1-208ENST00000397171 GOLGA3Q08378 1498 aa14.24□□□□□ -0.13
SCMH1-208ENST00000397171 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
SCMH1-208ENST00000397171 BCANQ96GW7 911 aa14.2□□□□□ -0.14
SCMH1-208ENST00000397171 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
SCMH1-208ENST00000397171 RBM19Q9Y4C8 960 aaKnown RBP14.17□□□□□ -0.14
SCMH1-208ENST00000397171 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
SCMH1-208ENST00000397171 NESP48681 1621 aa14.15□□□□□ -0.14
SCMH1-208ENST00000397171 CLIP1P30622 1438 aa14.15□□□□□ -0.14
SCMH1-208ENST00000397171 PRKCSHP14314 528 aaPredicted RBP14.13□□□□□ -0.15
SCMH1-208ENST00000397171 FKBP8Q14318 412 aa14.13□□□□□ -0.15
SCMH1-208ENST00000397171 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
SCMH1-208ENST00000397171 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
SCMH1-208ENST00000397171 APLP2Q06481 763 aa14.1□□□□□ -0.15
SCMH1-208ENST00000397171 MSH5O43196 834 aa14.08□□□□□ -0.16
SCMH1-208ENST00000397171 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
SCMH1-208ENST00000397171 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
SCMH1-208ENST00000397171 KIF21BO75037 1637 aa14.06□□□□□ -0.16
SCMH1-208ENST00000397171 CUX1P39880 1505 aa14.04□□□□□ -0.16
SCMH1-208ENST00000397171 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
SCMH1-208ENST00000397171 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
SCMH1-208ENST00000397171 CFTRP13569 1480 aa14□□□□□ -0.17
SCMH1-208ENST00000397171 ITGAEP38570 1179 aa13.99□□□□□ -0.17
SCMH1-208ENST00000397171 NEFLP07196 543 aa13.98□□□□□ -0.17
SCMH1-208ENST00000397171 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
SCMH1-208ENST00000397171 KIF27Q86VH2 1401 aa13.96□□□□□ -0.18
SCMH1-208ENST00000397171 KANK4Q5T7N3 995 aaPredicted RBP13.95□□□□□ -0.18
SCMH1-208ENST00000397171 PRXQ9BXM0 1461 aa13.95□□□□□ -0.18
SCMH1-208ENST00000397171 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms