RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
SCMH1-201ENST00000326197 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
SCMH1-201ENST00000326197 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
SCMH1-201ENST00000326197 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
SCMH1-201ENST00000326197 HRCP23327 699 aa16.79■□□□□ 0.28
SCMH1-201ENST00000326197 PCGF6Q9BYE7 350 aa16.77■□□□□ 0.28
SCMH1-201ENST00000326197 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
SCMH1-201ENST00000326197 PPARGC1BQ86YN6 1023 aaKnown RBP16.56■□□□□ 0.24
SCMH1-201ENST00000326197 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
SCMH1-201ENST00000326197 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
SCMH1-201ENST00000326197 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
SCMH1-201ENST00000326197 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
SCMH1-201ENST00000326197 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
SCMH1-201ENST00000326197 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
SCMH1-201ENST00000326197 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
SCMH1-201ENST00000326197 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
SCMH1-201ENST00000326197 ZEB1P37275 1124 aaPredicted RBP15.99■□□□□ 0.15
SCMH1-201ENST00000326197 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
SCMH1-201ENST00000326197 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
SCMH1-201ENST00000326197 ABCC9O60706 1549 aa15.84■□□□□ 0.13
SCMH1-201ENST00000326197 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
SCMH1-201ENST00000326197 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
SCMH1-201ENST00000326197 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
SCMH1-201ENST00000326197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
SCMH1-201ENST00000326197 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
SCMH1-201ENST00000326197 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
SCMH1-201ENST00000326197 CENPBP07199 599 aaPredicted RBP15.5■□□□□ 0.07
SCMH1-201ENST00000326197 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
SCMH1-201ENST00000326197 RB1CC1Q8TDY2 1594 aa15.46■□□□□ 0.07
SCMH1-201ENST00000326197 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.06
SCMH1-201ENST00000326197 NEUROD1Q13562 356 aa15.45■□□□□ 0.06
SCMH1-201ENST00000326197 GTF3C3Q9Y5Q9 886 aa15.43■□□□□ 0.06
SCMH1-201ENST00000326197 YTHDC1Q96MU7 727 aaKnown RBP15.36■□□□□ 0.05
SCMH1-201ENST00000326197 UBTFP17480 764 aaKnown RBP15.27■□□□□ 0.04
SCMH1-201ENST00000326197 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
SCMH1-201ENST00000326197 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
SCMH1-201ENST00000326197 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
SCMH1-201ENST00000326197 MYT1Q01538 1121 aa15.16■□□□□ 0.02
SCMH1-201ENST00000326197 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
SCMH1-201ENST00000326197 WIZO95785 1651 aa15.1■□□□□ 0.01
SCMH1-201ENST00000326197 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCMH1-201ENST00000326197 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
SCMH1-201ENST00000326197 CEP162Q5TB80 1403 aa15.08■□□□□ 0.01
SCMH1-201ENST00000326197 APLP2Q06481 763 aa15.07■□□□□ 0
SCMH1-201ENST00000326197 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
SCMH1-201ENST00000326197 MIER1Q8N108 512 aa15.03■□□□□ -0
SCMH1-201ENST00000326197 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
SCMH1-201ENST00000326197 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
SCMH1-201ENST00000326197 SOGA1O94964 1423 aa14.98□□□□□ -0.01
SCMH1-201ENST00000326197 NACADO15069 1562 aa14.96□□□□□ -0.02
SCMH1-201ENST00000326197 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
SCMH1-201ENST00000326197 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
SCMH1-201ENST00000326197 BAZ1AQ9NRL2 1556 aaPredicted RBP14.91□□□□□ -0.02
SCMH1-201ENST00000326197 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
SCMH1-201ENST00000326197 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
SCMH1-201ENST00000326197 EEA1Q15075 1411 aa14.83□□□□□ -0.04
SCMH1-201ENST00000326197 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
SCMH1-201ENST00000326197 CLIP1P30622 1438 aa14.78□□□□□ -0.04
SCMH1-201ENST00000326197 EIF4G1Q04637 1599 aaKnown RBP14.75□□□□□ -0.05
SCMH1-201ENST00000326197 ITGAEP38570 1179 aa14.74□□□□□ -0.05
SCMH1-201ENST00000326197 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
SCMH1-201ENST00000326197 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
SCMH1-201ENST00000326197 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
SCMH1-201ENST00000326197 SUPT16HQ9Y5B9 1047 aaKnown RBP14.66□□□□□ -0.06
SCMH1-201ENST00000326197 VPS8Q8N3P4 1428 aa14.65□□□□□ -0.06
SCMH1-201ENST00000326197 BCANQ96GW7 911 aa14.64□□□□□ -0.07
SCMH1-201ENST00000326197 CLSPNQ9HAW4 1339 aa14.6□□□□□ -0.07
SCMH1-201ENST00000326197 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
SCMH1-201ENST00000326197 RAPGEF2Q9Y4G8 1499 aa14.56□□□□□ -0.08
SCMH1-201ENST00000326197 DHX57Q6P158 1386 aaKnown RBP14.53□□□□□ -0.08
SCMH1-201ENST00000326197 KANK4Q5T7N3 995 aaPredicted RBP14.53□□□□□ -0.08
SCMH1-201ENST00000326197 NEFLP07196 543 aa14.51□□□□□ -0.09
SCMH1-201ENST00000326197 TSHZ2Q9NRE2 1034 aa14.5□□□□□ -0.09
SCMH1-201ENST00000326197 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
SCMH1-201ENST00000326197 ATP1B4Q9UN42 357 aaPredicted RBP14.49□□□□□ -0.09
SCMH1-201ENST00000326197 FKBP8Q14318 412 aa14.48□□□□□ -0.09
SCMH1-201ENST00000326197 KIF21BO75037 1637 aa14.48□□□□□ -0.09
SCMH1-201ENST00000326197 KCNH8Q96L42 1107 aa14.47□□□□□ -0.09
SCMH1-201ENST00000326197 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
SCMH1-201ENST00000326197 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
SCMH1-201ENST00000326197 ANP32EQ9BTT0 268 aa14.44□□□□□ -0.1
SCMH1-201ENST00000326197 FAM50AQ14320 339 aaKnown RBP14.42□□□□□ -0.1
SCMH1-201ENST00000326197 HIRIP3Q9BW71 556 aaPredicted RBP14.4□□□□□ -0.1
SCMH1-201ENST00000326197 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
SCMH1-201ENST00000326197 CCNB3Q8WWL7 1395 aa14.38□□□□□ -0.11
SCMH1-201ENST00000326197 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
SCMH1-201ENST00000326197 SIN3AQ96ST3 1273 aa14.35□□□□□ -0.11
SCMH1-201ENST00000326197 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
SCMH1-201ENST00000326197 ANP32CO43423 234 aa14.33□□□□□ -0.12
SCMH1-201ENST00000326197 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
SCMH1-201ENST00000326197 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
SCMH1-201ENST00000326197 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
SCMH1-201ENST00000326197 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
SCMH1-201ENST00000326197 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
SCMH1-201ENST00000326197 KIF27Q86VH2 1401 aa14.27□□□□□ -0.13
SCMH1-201ENST00000326197 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
SCMH1-201ENST00000326197 RBM19Q9Y4C8 960 aaKnown RBP14.24□□□□□ -0.13
SCMH1-201ENST00000326197 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
SCMH1-201ENST00000326197 PRXQ9BXM0 1461 aa14.22□□□□□ -0.13
SCMH1-201ENST00000326197 SETD5Q9C0A6 1442 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms