RNA–Protein interactions for RNA: ENST00000361672.6

MSL3-203, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-203ENST00000361672 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
MSL3-203ENST00000361672 CCDC180Q9P1Z9 1646 aa19.46■□□□□ 0.71
MSL3-203ENST00000361672 ABCC9O60706 1549 aa19.34■□□□□ 0.69
MSL3-203ENST00000361672 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
MSL3-203ENST00000361672 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
MSL3-203ENST00000361672 NACADO15069 1562 aa18.3■□□□□ 0.52
MSL3-203ENST00000361672 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
MSL3-203ENST00000361672 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
MSL3-203ENST00000361672 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
MSL3-203ENST00000361672 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
MSL3-203ENST00000361672 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
MSL3-203ENST00000361672 BICRAQ9NZM4 1560 aa17.85■□□□□ 0.45
MSL3-203ENST00000361672 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.45
MSL3-203ENST00000361672 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
MSL3-203ENST00000361672 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
MSL3-203ENST00000361672 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
MSL3-203ENST00000361672 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
MSL3-203ENST00000361672 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
MSL3-203ENST00000361672 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
MSL3-203ENST00000361672 CUX2O14529 1486 aa17.3■□□□□ 0.36
MSL3-203ENST00000361672 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
MSL3-203ENST00000361672 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
MSL3-203ENST00000361672 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
MSL3-203ENST00000361672 SMARCA2P51531 1590 aa16.77■□□□□ 0.28
MSL3-203ENST00000361672 SMARCA4P51532 1647 aa16.77■□□□□ 0.27
MSL3-203ENST00000361672 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
MSL3-203ENST00000361672 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
MSL3-203ENST00000361672 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
MSL3-203ENST00000361672 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
MSL3-203ENST00000361672 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
MSL3-203ENST00000361672 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
MSL3-203ENST00000361672 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
MSL3-203ENST00000361672 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
MSL3-203ENST00000361672 NESP48681 1621 aa16.41■□□□□ 0.22
MSL3-203ENST00000361672 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
MSL3-203ENST00000361672 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
MSL3-203ENST00000361672 WDR62O43379 1518 aa16.3■□□□□ 0.2
MSL3-203ENST00000361672 WIZO95785 1651 aa16.26■□□□□ 0.19
MSL3-203ENST00000361672 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
MSL3-203ENST00000361672 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
MSL3-203ENST00000361672 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
MSL3-203ENST00000361672 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
MSL3-203ENST00000361672 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
MSL3-203ENST00000361672 RIMBP3CA6NJZ7 1639 aa16.12■□□□□ 0.17
MSL3-203ENST00000361672 RIMBP3BA6NNM3 1639 aa16.12■□□□□ 0.17
MSL3-203ENST00000361672 RIMBP3Q9UFD9 1639 aa16.12■□□□□ 0.17
MSL3-203ENST00000361672 CFTRP13569 1480 aa16.11■□□□□ 0.17
MSL3-203ENST00000361672 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
MSL3-203ENST00000361672 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
MSL3-203ENST00000361672 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
MSL3-203ENST00000361672 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
MSL3-203ENST00000361672 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
MSL3-203ENST00000361672 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
MSL3-203ENST00000361672 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
MSL3-203ENST00000361672 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
MSL3-203ENST00000361672 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
MSL3-203ENST00000361672 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
MSL3-203ENST00000361672 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
MSL3-203ENST00000361672 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
MSL3-203ENST00000361672 ARAP1Q96P48 1450 aa15.73■□□□□ 0.11
MSL3-203ENST00000361672 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
MSL3-203ENST00000361672 CHD1O14646 1710 aa15.67■□□□□ 0.1
MSL3-203ENST00000361672 EIF4G3O43432 1585 aaKnown RBP15.65■□□□□ 0.1
MSL3-203ENST00000361672 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
MSL3-203ENST00000361672 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
MSL3-203ENST00000361672 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
MSL3-203ENST00000361672 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
MSL3-203ENST00000361672 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
MSL3-203ENST00000361672 CUX1P39880 1505 aa15.49■□□□□ 0.07
MSL3-203ENST00000361672 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
MSL3-203ENST00000361672 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
MSL3-203ENST00000361672 SOGA1O94964 1423 aa15.46■□□□□ 0.07
MSL3-203ENST00000361672 SYNJ1O43426 1573 aa15.46■□□□□ 0.06
MSL3-203ENST00000361672 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.061e-7■■■■□ 19.5
MSL3-203ENST00000361672 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
MSL3-203ENST00000361672 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
MSL3-203ENST00000361672 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
MSL3-203ENST00000361672 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
MSL3-203ENST00000361672 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
MSL3-203ENST00000361672 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
MSL3-203ENST00000361672 SNAPC4Q5SXM2 1469 aa15.38■□□□□ 0.05
MSL3-203ENST00000361672 SYNJ2O15056 1496 aa15.36■□□□□ 0.05
MSL3-203ENST00000361672 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
MSL3-203ENST00000361672 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
MSL3-203ENST00000361672 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
MSL3-203ENST00000361672 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.04
MSL3-203ENST00000361672 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
MSL3-203ENST00000361672 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
MSL3-203ENST00000361672 KIF13AQ9H1H9 1805 aa15.25■□□□□ 0.03
MSL3-203ENST00000361672 SHROOM2Q13796 1616 aa15.2■□□□□ 0.02
MSL3-203ENST00000361672 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
MSL3-203ENST00000361672 NUP160Q12769 1436 aa15.2■□□□□ 0.02
MSL3-203ENST00000361672 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
MSL3-203ENST00000361672 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
MSL3-203ENST00000361672 ILDR1Q86SU0 546 aaPredicted RBP15.18■□□□□ 0.02
MSL3-203ENST00000361672 FBLN2P98095 1184 aa15.17■□□□□ 0.02
MSL3-203ENST00000361672 CEP170Q5SW79 1584 aa15.13■□□□□ 0.01
MSL3-203ENST00000361672 SUPT5HO00267 1087 aaKnown RBP15.13■□□□□ 0.01
MSL3-203ENST00000361672 ERCC6L2Q5T890 1561 aa15.08■□□□□ 0
MSL3-203ENST00000361672 CUL7Q14999 1698 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms