RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.49
CRKL-201ENST00000354336 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
CRKL-201ENST00000354336 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
CRKL-201ENST00000354336 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
CRKL-201ENST00000354336 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
CRKL-201ENST00000354336 PELP1Q8IZL8 1130 aaKnown RBP28.17■■■□□ 2.1
CRKL-201ENST00000354336 APLP2Q06481 763 aa27.97■■■□□ 2.07
CRKL-201ENST00000354336 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
CRKL-201ENST00000354336 PCGF6Q9BYE7 350 aa27.65■■■□□ 2.02
CRKL-201ENST00000354336 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
CRKL-201ENST00000354336 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
CRKL-201ENST00000354336 CENPBP07199 599 aaPredicted RBP27.26■■□□□ 1.95
CRKL-201ENST00000354336 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
CRKL-201ENST00000354336 CCER1Q8TC90 406 aaPredicted RBP27.15■■□□□ 1.94
CRKL-201ENST00000354336 RANGAP1P46060 587 aaPredicted RBP27.07■■□□□ 1.92
CRKL-201ENST00000354336 ERICH6Q7L0X2 663 aa26.94■■□□□ 1.9
CRKL-201ENST00000354336 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
CRKL-201ENST00000354336 ATP1B4Q9UN42 357 aaPredicted RBP26.84■■□□□ 1.89
CRKL-201ENST00000354336 NEFLP07196 543 aa26.62■■□□□ 1.85
CRKL-201ENST00000354336 YTHDC1Q96MU7 727 aaKnown RBP26.57■■□□□ 1.84
CRKL-201ENST00000354336 TRIM26Q12899 539 aaPredicted RBP26.52■■□□□ 1.84
CRKL-201ENST00000354336 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.83
CRKL-201ENST00000354336 MYT1Q01538 1121 aa26.39■■□□□ 1.81
CRKL-201ENST00000354336 HRCP23327 699 aa26.32■■□□□ 1.8
CRKL-201ENST00000354336 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.77
CRKL-201ENST00000354336 LOC105371045A0A1W2PR82 267 aa26.1■■□□□ 1.77
CRKL-201ENST00000354336 ITGAEP38570 1179 aa26.03■■□□□ 1.76
CRKL-201ENST00000354336 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
CRKL-201ENST00000354336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.85■■□□□ 1.73
CRKL-201ENST00000354336 POLR3GLQ9BT43 218 aa25.83■■□□□ 1.73
CRKL-201ENST00000354336 DAXXQ9UER7 740 aaPredicted RBP25.79■■□□□ 1.72
CRKL-201ENST00000354336 MYT1LQ9UL68 1186 aa25.71■■□□□ 1.71
CRKL-201ENST00000354336 DIEXFQ68CQ4 756 aaKnown RBP25.63■■□□□ 1.69
CRKL-201ENST00000354336 CNGB1Q14028 1251 aaPredicted RBP25.55■■□□□ 1.68
CRKL-201ENST00000354336 FAM50AQ14320 339 aaKnown RBP25.39■■□□□ 1.66
CRKL-201ENST00000354336 RTL5Q5HYW3 569 aaPredicted RBP25.27■■□□□ 1.64
CRKL-201ENST00000354336 SLC4A1APQ9BWU0 796 aaKnown RBP25.27■■□□□ 1.64
CRKL-201ENST00000354336 TRIM52Q96A61 297 aa25.25■■□□□ 1.63
CRKL-201ENST00000354336 ZNF316A6NFI3 1004 aaPredicted RBP25.21■■□□□ 1.63
CRKL-201ENST00000354336 NEUROD1Q13562 356 aa25.21■■□□□ 1.63
CRKL-201ENST00000354336 CLSPNQ9HAW4 1339 aa25.21■■□□□ 1.63
CRKL-201ENST00000354336 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
CRKL-201ENST00000354336 GTF3C3Q9Y5Q9 886 aa25.12■■□□□ 1.61
CRKL-201ENST00000354336 ABCC9O60706 1549 aa25.11■■□□□ 1.61
CRKL-201ENST00000354336 ANP32CO43423 234 aa25.09■■□□□ 1.61
CRKL-201ENST00000354336 BCANQ96GW7 911 aa25.04■■□□□ 1.6
CRKL-201ENST00000354336 ZNF326Q5BKZ1 582 aaKnown RBP24.93■■□□□ 1.58
CRKL-201ENST00000354336 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
CRKL-201ENST00000354336 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
CRKL-201ENST00000354336 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
CRKL-201ENST00000354336 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.54
CRKL-201ENST00000354336 FBLN2P98095 1184 aa24.68■■□□□ 1.54
CRKL-201ENST00000354336 P3H3Q8IVL6 736 aa24.67■■□□□ 1.54
CRKL-201ENST00000354336 CANXP27824 592 aaKnown RBP24.63■■□□□ 1.53
CRKL-201ENST00000354336 ARID3CA6NKF2 412 aa24.54■■□□□ 1.52
CRKL-201ENST00000354336 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
CRKL-201ENST00000354336 ANP32AP39687 249 aaKnown RBP24.52■■□□□ 1.52
CRKL-201ENST00000354336 NEFMP07197 916 aa24.5■■□□□ 1.51
CRKL-201ENST00000354336 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
CRKL-201ENST00000354336 TONSLQ96HA7 1378 aa24.44■■□□□ 1.5
CRKL-201ENST00000354336 FKBP8Q14318 412 aa24.38■■□□□ 1.49
CRKL-201ENST00000354336 BCL11AQ9H165 835 aa24.37■■□□□ 1.49
CRKL-201ENST00000354336 SLC24A1O60721 1099 aa24.36■■□□□ 1.49
CRKL-201ENST00000354336 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
CRKL-201ENST00000354336 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
CRKL-201ENST00000354336 NPM2Q86SE8 214 aaKnown RBP24.32■■□□□ 1.48
CRKL-201ENST00000354336 HNRNPUQ00839 825 aaKnown RBP eCLIP24.3■■□□□ 1.48
CRKL-201ENST00000354336 DDX10Q13206 875 aaKnown RBP24.29■■□□□ 1.48
CRKL-201ENST00000354336 FAM9BQ8IZU0 186 aa24.21■■□□□ 1.47
CRKL-201ENST00000354336 UPF2Q9HAU5 1272 aaKnown RBP24.1■■□□□ 1.45
CRKL-201ENST00000354336 CHGAP10645 457 aaKnown RBP24.08■■□□□ 1.45
CRKL-201ENST00000354336 CHIC2Q9UKJ5 165 aa24.08■■□□□ 1.45
CRKL-201ENST00000354336 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
CRKL-201ENST00000354336 HSP90AA1P07900 732 aaKnown RBP24.05■■□□□ 1.44
CRKL-201ENST00000354336 ANP32BQ92688 251 aaKnown RBP24.05■■□□□ 1.44
CRKL-201ENST00000354336 CCDC136Q96JN2 1154 aa24.04■■□□□ 1.44
CRKL-201ENST00000354336 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
CRKL-201ENST00000354336 ESF1Q9H501 851 aaKnown RBP24.02■■□□□ 1.44
CRKL-201ENST00000354336 MRS2Q9HD23 443 aa24■■□□□ 1.43
CRKL-201ENST00000354336 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.99■■□□□ 1.43
CRKL-201ENST00000354336 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
CRKL-201ENST00000354336 CLIP1P30622 1438 aa23.99■■□□□ 1.43
CRKL-201ENST00000354336 MIER1Q8N108 512 aa23.99■■□□□ 1.43
CRKL-201ENST00000354336 MTUS2Q5JR59 1369 aa23.97■■□□□ 1.43
CRKL-201ENST00000354336 WDR43Q15061 677 aaKnown RBP eCLIP23.93■■□□□ 1.42
CRKL-201ENST00000354336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.93■■□□□ 1.42
CRKL-201ENST00000354336 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
CRKL-201ENST00000354336 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
CRKL-201ENST00000354336 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
CRKL-201ENST00000354336 EIF5BO60841 1220 aaKnown RBP23.88■■□□□ 1.41
CRKL-201ENST00000354336 NPM1P06748 294 aaKnown RBP eCLIP23.88■■□□□ 1.41
CRKL-201ENST00000354336 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
CRKL-201ENST00000354336 EIF4G2P78344 907 aaKnown RBP eCLIP23.85■■□□□ 1.41
CRKL-201ENST00000354336 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
CRKL-201ENST00000354336 EEA1Q15075 1411 aa23.84■■□□□ 1.41
CRKL-201ENST00000354336 NBR1Q14596 966 aa23.82■■□□□ 1.4
CRKL-201ENST00000354336 HIRIP3Q9BW71 556 aaPredicted RBP23.82■■□□□ 1.4
CRKL-201ENST00000354336 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
CRKL-201ENST00000354336 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
CRKL-201ENST00000354336 CEP162Q5TB80 1403 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms