RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
SPTB-208ENST00000556626 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
SPTB-208ENST00000556626 MYT1Q01538 1121 aa17.57■□□□□ 0.4
SPTB-208ENST00000556626 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
SPTB-208ENST00000556626 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
SPTB-208ENST00000556626 CCER1Q8TC90 406 aaPredicted RBP16.91■□□□□ 0.3
SPTB-208ENST00000556626 CENPBP07199 599 aaPredicted RBP16.87■□□□□ 0.29
SPTB-208ENST00000556626 APLP2Q06481 763 aa16.71■□□□□ 0.27
SPTB-208ENST00000556626 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
SPTB-208ENST00000556626 SHROOM4Q9ULL8 1493 aa16.69■□□□□ 0.26
SPTB-208ENST00000556626 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
SPTB-208ENST00000556626 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
SPTB-208ENST00000556626 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
SPTB-208ENST00000556626 NEFLP07196 543 aa16.44■□□□□ 0.22
SPTB-208ENST00000556626 TTBK1Q5TCY1 1321 aaPredicted RBP16.28■□□□□ 0.2
SPTB-208ENST00000556626 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
SPTB-208ENST00000556626 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
SPTB-208ENST00000556626 DAXXQ9UER7 740 aaPredicted RBP16.12■□□□□ 0.17
SPTB-208ENST00000556626 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
SPTB-208ENST00000556626 RANGAP1P46060 587 aaPredicted RBP15.87■□□□□ 0.13
SPTB-208ENST00000556626 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
SPTB-208ENST00000556626 HRCP23327 699 aa15.85■□□□□ 0.13
SPTB-208ENST00000556626 RTL5Q5HYW3 569 aaPredicted RBP15.85■□□□□ 0.13
SPTB-208ENST00000556626 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
SPTB-208ENST00000556626 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
SPTB-208ENST00000556626 ZNF316A6NFI3 1004 aaPredicted RBP15.74■□□□□ 0.11
SPTB-208ENST00000556626 PPARGC1BQ86YN6 1023 aaKnown RBP15.56■□□□□ 0.08
SPTB-208ENST00000556626 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
SPTB-208ENST00000556626 CLSPNQ9HAW4 1339 aa15.5■□□□□ 0.07
SPTB-208ENST00000556626 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.07
SPTB-208ENST00000556626 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
SPTB-208ENST00000556626 CDK11AQ9UQ88 783 aaPredicted RBP15.36■□□□□ 0.05
SPTB-208ENST00000556626 ITGAEP38570 1179 aa15.35■□□□□ 0.05
SPTB-208ENST00000556626 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
SPTB-208ENST00000556626 CNGB1Q14028 1251 aaPredicted RBP15.27■□□□□ 0.04
SPTB-208ENST00000556626 GLIPR1L2Q4G1C9 344 aa15.27■□□□□ 0.03
SPTB-208ENST00000556626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
SPTB-208ENST00000556626 BCANQ96GW7 911 aa15.22■□□□□ 0.03
SPTB-208ENST00000556626 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
SPTB-208ENST00000556626 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
SPTB-208ENST00000556626 EIF5BO60841 1220 aaKnown RBP15.17■□□□□ 0.02
SPTB-208ENST00000556626 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
SPTB-208ENST00000556626 ANP32CO43423 234 aa15.13■□□□□ 0.01
SPTB-208ENST00000556626 MYT1LQ9UL68 1186 aa15.13■□□□□ 0.01
SPTB-208ENST00000556626 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
SPTB-208ENST00000556626 ANP32BQ92688 251 aaKnown RBP15.09■□□□□ 0.01
SPTB-208ENST00000556626 ACIN1Q9UKV3 1341 aaKnown RBP15.09■□□□□ 0.01
SPTB-208ENST00000556626 CHIC1Q5VXU3 224 aa15.05■□□□□ 0
SPTB-208ENST00000556626 CANXP27824 592 aaKnown RBP14.99□□□□□ -0.01
SPTB-208ENST00000556626 FAM50AQ14320 339 aaKnown RBP14.95□□□□□ -0.02
SPTB-208ENST00000556626 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
SPTB-208ENST00000556626 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
SPTB-208ENST00000556626 HSP90AA1P07900 732 aaKnown RBP14.88□□□□□ -0.03
SPTB-208ENST00000556626 TRIM52Q96A61 297 aa14.86□□□□□ -0.03
SPTB-208ENST00000556626 UPF2Q9HAU5 1272 aaKnown RBP14.85□□□□□ -0.03
SPTB-208ENST00000556626 NBR1Q14596 966 aa14.81□□□□□ -0.04
SPTB-208ENST00000556626 FKBP8Q14318 412 aa14.79□□□□□ -0.04
SPTB-208ENST00000556626 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
SPTB-208ENST00000556626 NEFMP07197 916 aa14.77□□□□□ -0.04
SPTB-208ENST00000556626 ZNF326Q5BKZ1 582 aaKnown RBP14.77□□□□□ -0.04
SPTB-208ENST00000556626 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
SPTB-208ENST00000556626 SLC24A1O60721 1099 aa14.7□□□□□ -0.06
SPTB-208ENST00000556626 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
SPTB-208ENST00000556626 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
SPTB-208ENST00000556626 ARXQ96QS3 562 aa14.62□□□□□ -0.07
SPTB-208ENST00000556626 ANP32EQ9BTT0 268 aa14.62□□□□□ -0.07
SPTB-208ENST00000556626 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
SPTB-208ENST00000556626 CCDC136Q96JN2 1154 aa14.62□□□□□ -0.07
SPTB-208ENST00000556626 CCDC180Q9P1Z9 1646 aa14.6□□□□□ -0.07
SPTB-208ENST00000556626 TRIM44Q96DX7 344 aaPredicted RBP14.58□□□□□ -0.07
SPTB-208ENST00000556626 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
SPTB-208ENST00000556626 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
SPTB-208ENST00000556626 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
SPTB-208ENST00000556626 BECN1Q14457 450 aa14.51□□□□□ -0.09
SPTB-208ENST00000556626 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
SPTB-208ENST00000556626 ERICH6BQ5W0A0 696 aa14.45□□□□□ -0.1
SPTB-208ENST00000556626 GOLGA6L22H0YM25 854 aa14.43□□□□□ -0.1
SPTB-208ENST00000556626 TMC1Q8TDI8 760 aa14.43□□□□□ -0.1
SPTB-208ENST00000556626 DDX10Q13206 875 aaKnown RBP14.42□□□□□ -0.1
SPTB-208ENST00000556626 CDK11BP21127 795 aaKnown RBP14.41□□□□□ -0.1
SPTB-208ENST00000556626 MYH16Q9H6N6 1097 aa14.38□□□□□ -0.11
SPTB-208ENST00000556626 NCLP19338 710 aaKnown RBP14.37□□□□□ -0.11
SPTB-208ENST00000556626 NAP1L5Q96NT1 182 aaPredicted RBP14.37□□□□□ -0.11
SPTB-208ENST00000556626 DNTTIP2Q5QJE6 756 aaKnown RBP14.36□□□□□ -0.11
SPTB-208ENST00000556626 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPTB-208ENST00000556626 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
SPTB-208ENST00000556626 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.12
SPTB-208ENST00000556626 MRS2Q9HD23 443 aa14.32□□□□□ -0.12
SPTB-208ENST00000556626 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
SPTB-208ENST00000556626 PPM1GO15355 546 aaPredicted RBP14.31□□□□□ -0.12
SPTB-208ENST00000556626 MIER1Q8N108 512 aa14.31□□□□□ -0.12
SPTB-208ENST00000556626 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.12
SPTB-208ENST00000556626 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
SPTB-208ENST00000556626 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
SPTB-208ENST00000556626 CASC1Q6TDU7 716 aa14.23□□□□□ -0.13
SPTB-208ENST00000556626 CHAF1AQ13111 956 aaPredicted RBP14.2□□□□□ -0.14
SPTB-208ENST00000556626 ZNF777Q9ULD5 760 aaPredicted RBP14.2□□□□□ -0.14
SPTB-208ENST00000556626 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
SPTB-208ENST00000556626 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
SPTB-208ENST00000556626 GOLGA6L6A8MZA4 724 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms