RNA–Protein interactions for RNA: ENST00000530859.1

NPAT-203, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

TSL 2

Gene NPAT, Length 1,806 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-203ENST00000530859 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
NPAT-203ENST00000530859 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
NPAT-203ENST00000530859 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
NPAT-203ENST00000530859 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
NPAT-203ENST00000530859 PLPPR3Q6T4P5 718 aa14.11□□□□□ -0.15
NPAT-203ENST00000530859 FOXD1Q16676 465 aa13.94□□□□□ -0.18
NPAT-203ENST00000530859 PPP6R1Q9UPN7 881 aa13.46□□□□□ -0.25
NPAT-203ENST00000530859 ADRA2BP18089 450 aa13.46□□□□□ -0.26
NPAT-203ENST00000530859 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
NPAT-203ENST00000530859 MSH5O43196 834 aa12.83□□□□□ -0.35
NPAT-203ENST00000530859 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.42
NPAT-203ENST00000530859 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
NPAT-203ENST00000530859 SCAF1Q9H7N4 1312 aaKnown RBP12.3□□□□□ -0.44
NPAT-203ENST00000530859 KCNA4P22459 653 aa12.23□□□□□ -0.45
NPAT-203ENST00000530859 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
NPAT-203ENST00000530859 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
NPAT-203ENST00000530859 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
NPAT-203ENST00000530859 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
NPAT-203ENST00000530859 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
NPAT-203ENST00000530859 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
NPAT-203ENST00000530859 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
NPAT-203ENST00000530859 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
NPAT-203ENST00000530859 DNAJC5BQ9UF47 199 aa11.63□□□□□ -0.55
NPAT-203ENST00000530859 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.57
NPAT-203ENST00000530859 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
NPAT-203ENST00000530859 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
NPAT-203ENST00000530859 ZBTB22O15209 634 aa11.26□□□□□ -0.61
NPAT-203ENST00000530859 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
NPAT-203ENST00000530859 CSRNP3Q8WYN3 585 aa11.23□□□□□ -0.61
NPAT-203ENST00000530859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
NPAT-203ENST00000530859 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
NPAT-203ENST00000530859 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
NPAT-203ENST00000530859 RNF39Q9H2S5 420 aa11□□□□□ -0.65
NPAT-203ENST00000530859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
NPAT-203ENST00000530859 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
NPAT-203ENST00000530859 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
NPAT-203ENST00000530859 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
NPAT-203ENST00000530859 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
NPAT-203ENST00000530859 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
NPAT-203ENST00000530859 APLP2Q06481 763 aa10.8□□□□□ -0.68
NPAT-203ENST00000530859 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
NPAT-203ENST00000530859 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
NPAT-203ENST00000530859 CAPN15O75808 1086 aa10.68□□□□□ -0.7
NPAT-203ENST00000530859 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
NPAT-203ENST00000530859 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
NPAT-203ENST00000530859 DSG3P32926 999 aa10.49□□□□□ -0.73
NPAT-203ENST00000530859 ABCB7O75027 752 aa10.48□□□□□ -0.73
NPAT-203ENST00000530859 POLA2Q14181 598 aa10.47□□□□□ -0.73
NPAT-203ENST00000530859 ZBTB12Q9Y330 459 aaPredicted RBP10.32□□□□□ -0.76
NPAT-203ENST00000530859 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
NPAT-203ENST00000530859 FBLN2P98095 1184 aa10.3□□□□□ -0.76
NPAT-203ENST00000530859 FKBP8Q14318 412 aa10.14□□□□□ -0.79
NPAT-203ENST00000530859 OSCARQ8IYS5 282 aa10.12□□□□□ -0.79
NPAT-203ENST00000530859 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
NPAT-203ENST00000530859 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
NPAT-203ENST00000530859 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
NPAT-203ENST00000530859 SPDYE2Q495Y8 402 aa10.05□□□□□ -0.8
NPAT-203ENST00000530859 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
NPAT-203ENST00000530859 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
NPAT-203ENST00000530859 SSUH2Q9Y2M2 353 aa9.98□□□□□ -0.81
NPAT-203ENST00000530859 PROM2Q8N271 834 aa9.94□□□□□ -0.82
NPAT-203ENST00000530859 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
NPAT-203ENST00000530859 PABPN1Q86U42 306 aaKnown RBP eCLIP9.88□□□□□ -0.83
NPAT-203ENST00000530859 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
NPAT-203ENST00000530859 FBXO3Q9UK99 471 aa9.77□□□□□ -0.85
NPAT-203ENST00000530859 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
NPAT-203ENST00000530859 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
NPAT-203ENST00000530859 POTEHQ6S545 545 aa9.7□□□□□ -0.86
NPAT-203ENST00000530859 PITPNM1O00562 1244 aa9.68□□□□□ -0.86
NPAT-203ENST00000530859 CLEC11AQ9Y240 323 aa9.67□□□□□ -0.86
NPAT-203ENST00000530859 VASPP50552 380 aaPredicted RBP9.65□□□□□ -0.86
NPAT-203ENST00000530859 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
NPAT-203ENST00000530859 CHRDL2Q6WN34 429 aa9.55□□□□□ -0.88
NPAT-203ENST00000530859 MIER1Q8N108 512 aa9.55□□□□□ -0.88
NPAT-203ENST00000530859 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
NPAT-203ENST00000530859 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
NPAT-203ENST00000530859 CREBZFQ9NS37 354 aa9.51□□□□□ -0.89
NPAT-203ENST00000530859 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
NPAT-203ENST00000530859 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
NPAT-203ENST00000530859 KLHL34Q8N239 644 aa9.46□□□□□ -0.9
NPAT-203ENST00000530859 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
NPAT-203ENST00000530859 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
NPAT-203ENST00000530859 PRKAR2AP13861 404 aaKnown RBP9.43□□□□□ -0.9
NPAT-203ENST00000530859 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
NPAT-203ENST00000530859 MNX1P50219 401 aaPredicted RBP9.41□□□□□ -0.9
NPAT-203ENST00000530859 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
NPAT-203ENST00000530859 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
NPAT-203ENST00000530859 NPM1P06748 294 aaKnown RBP eCLIP9.34□□□□□ -0.91
NPAT-203ENST00000530859 AMER1Q5JTC6 1135 aaPredicted RBP9.34□□□□□ -0.91
NPAT-203ENST00000530859 NUBP1P53384 320 aa9.32□□□□□ -0.92
NPAT-203ENST00000530859 RTN4Q9NQC3 1192 aaKnown RBP9.32□□□□□ -0.92
NPAT-203ENST00000530859 RASEFQ8IZ41 740 aa9.26□□□□□ -0.93
NPAT-203ENST00000530859 FAM212AQ96EL1 285 aa9.23□□□□□ -0.93
NPAT-203ENST00000530859 CIZ1Q9ULV3 898 aaPredicted RBP9.23□□□□□ -0.93
NPAT-203ENST00000530859 GSE1Q14687 1217 aa9.22□□□□□ -0.93
NPAT-203ENST00000530859 DCAF8Q5TAQ9 597 aa9.22□□□□□ -0.93
NPAT-203ENST00000530859 PKD2Q13563 968 aa9.21□□□□□ -0.93
NPAT-203ENST00000530859 TSPYL2Q9H2G4 693 aaPredicted RBP9.19□□□□□ -0.94
NPAT-203ENST00000530859 C19orf67A6NJJ6 358 aa9.17□□□□□ -0.94
NPAT-203ENST00000530859 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms