RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 AEBP2Q6ZN18 517 aaPredicted RBP35.13■■■■□ 3.21
SLF1-203ENST00000466957 CHIC1Q5VXU3 224 aa33.79■■■■□ 3
SLF1-203ENST00000466957 SENP3Q9H4L4 574 aaPredicted RBP29.94■■■□□ 2.38
SLF1-203ENST00000466957 PHF23Q9BUL5 403 aaPredicted RBP29.64■■■□□ 2.34
SLF1-203ENST00000466957 FOXD1Q16676 465 aa27.84■■■□□ 2.05
SLF1-203ENST00000466957 PLPPR3Q6T4P5 718 aa27.23■■□□□ 1.95
SLF1-203ENST00000466957 PPP6R1Q9UPN7 881 aa26.34■■□□□ 1.81
SLF1-203ENST00000466957 ADRA2BP18089 450 aa26.33■■□□□ 1.81
SLF1-203ENST00000466957 PIAS4Q8N2W9 510 aaPredicted RBP26.19■■□□□ 1.78
SLF1-203ENST00000466957 MSH5O43196 834 aa25.91■■□□□ 1.74
SLF1-203ENST00000466957 POTEDQ86YR6 584 aa24.55■■□□□ 1.52
SLF1-203ENST00000466957 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
SLF1-203ENST00000466957 MAPK8IP2Q13387 824 aaPredicted RBP24.04■■□□□ 1.44
SLF1-203ENST00000466957 PPP4R3CPQ6ZMV5 832 aa23.93■■□□□ 1.42
SLF1-203ENST00000466957 DMRT2Q9Y5R5 561 aa23.78■■□□□ 1.4
SLF1-203ENST00000466957 CNKSR2Q8WXI2 1034 aa23.37■■□□□ 1.33
SLF1-203ENST00000466957 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
SLF1-203ENST00000466957 HOXD11P31277 338 aaPredicted RBP23.05■■□□□ 1.28
SLF1-203ENST00000466957 RNF216Q9NWF9 866 aaPredicted RBP23.02■■□□□ 1.28
SLF1-203ENST00000466957 DCAF8L1A6NGE4 600 aa22.94■■□□□ 1.26
SLF1-203ENST00000466957 NPM3O75607 178 aaKnown RBP22.79■■□□□ 1.24
SLF1-203ENST00000466957 KCNA4P22459 653 aa22.76■■□□□ 1.23
SLF1-203ENST00000466957 RNF39Q9H2S5 420 aa22.11■■□□□ 1.13
SLF1-203ENST00000466957 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
SLF1-203ENST00000466957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.08■■□□□ 1.13
SLF1-203ENST00000466957 CACNB1Q02641 598 aaPredicted RBP22.02■■□□□ 1.12
SLF1-203ENST00000466957 C1QBPQ07021 282 aaKnown RBP21.82■■□□□ 1.08
SLF1-203ENST00000466957 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
SLF1-203ENST00000466957 U3KPZ7 1027 aaPredicted RBP21.6■■□□□ 1.05
SLF1-203ENST00000466957 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
SLF1-203ENST00000466957 CAPN15O75808 1086 aa21.19■□□□□ 0.98
SLF1-203ENST00000466957 SPINK5Q9NQ38 1064 aaPredicted RBP21.18■□□□□ 0.98
SLF1-203ENST00000466957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.16■□□□□ 0.98
SLF1-203ENST00000466957 HNRNPUL2Q1KMD3 747 aaKnown RBP21.16■□□□□ 0.98
SLF1-203ENST00000466957 FOXD4L1Q9NU39 408 aa21.11■□□□□ 0.97
SLF1-203ENST00000466957 MYCNP04198 464 aaPredicted RBP21.1■□□□□ 0.97
SLF1-203ENST00000466957 APLP2Q06481 763 aa21.09■□□□□ 0.97
SLF1-203ENST00000466957 SAMD1Q6SPF0 538 aaPredicted RBP21.06■□□□□ 0.96
SLF1-203ENST00000466957 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
SLF1-203ENST00000466957 ZBTB22O15209 634 aa20.89■□□□□ 0.93
SLF1-203ENST00000466957 ZNF219Q9P2Y4 722 aaPredicted RBP20.88■□□□□ 0.93
SLF1-203ENST00000466957 DSG3P32926 999 aa20.87■□□□□ 0.93
SLF1-203ENST00000466957 ABCB7O75027 752 aa20.73■□□□□ 0.91
SLF1-203ENST00000466957 ATF5Q9Y2D1 282 aaPredicted RBP20.55■□□□□ 0.88
SLF1-203ENST00000466957 POLA2Q14181 598 aa20.44■□□□□ 0.86
SLF1-203ENST00000466957 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
SLF1-203ENST00000466957 ATXN8OSP0DMR3 200 aa20.36■□□□□ 0.85
SLF1-203ENST00000466957 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.85
SLF1-203ENST00000466957 ZBTB12Q9Y330 459 aaPredicted RBP20.05■□□□□ 0.8
SLF1-203ENST00000466957 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
SLF1-203ENST00000466957 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
SLF1-203ENST00000466957 FBLN2P98095 1184 aa19.78■□□□□ 0.76
SLF1-203ENST00000466957 MKRN4PQ13434 485 aaPredicted RBP19.61■□□□□ 0.73
SLF1-203ENST00000466957 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
SLF1-203ENST00000466957 SPDYE2BA6NHP3 402 aa19.45■□□□□ 0.7
SLF1-203ENST00000466957 SPDYE6P0CI01 402 aa19.45■□□□□ 0.7
SLF1-203ENST00000466957 SPDYE2Q495Y8 402 aa19.45■□□□□ 0.7
SLF1-203ENST00000466957 REM2Q8IYK8 340 aaPredicted RBP19.36■□□□□ 0.69
SLF1-203ENST00000466957 POTEHQ6S545 545 aa19.34■□□□□ 0.69
SLF1-203ENST00000466957 ZNF692Q9BU19 519 aaPredicted RBP19.33■□□□□ 0.68
SLF1-203ENST00000466957 CHRDL2Q6WN34 429 aa19.32■□□□□ 0.68
SLF1-203ENST00000466957 SSUH2Q9Y2M2 353 aa19.21■□□□□ 0.67
SLF1-203ENST00000466957 PITPNM1O00562 1244 aa19.17■□□□□ 0.66
SLF1-203ENST00000466957 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
SLF1-203ENST00000466957 CLEC11AQ9Y240 323 aa19.05■□□□□ 0.64
SLF1-203ENST00000466957 SPDYE1Q8NFV5 336 aaPredicted RBP19.03■□□□□ 0.64
SLF1-203ENST00000466957 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
SLF1-203ENST00000466957 PIP4P2Q8N4L2 257 aa18.94■□□□□ 0.62
SLF1-203ENST00000466957 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.61
SLF1-203ENST00000466957 PRR29P0C7W0 189 aa18.75■□□□□ 0.59
SLF1-203ENST00000466957 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
SLF1-203ENST00000466957 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
SLF1-203ENST00000466957 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
SLF1-203ENST00000466957 HAX1O00165 279 aa18.55■□□□□ 0.56
SLF1-203ENST00000466957 FKBP8Q14318 412 aa18.49■□□□□ 0.55
SLF1-203ENST00000466957 PROM2Q8N271 834 aa18.46■□□□□ 0.55
SLF1-203ENST00000466957 SP7Q8TDD2 431 aaPredicted RBP18.33■□□□□ 0.52
SLF1-203ENST00000466957 CREBZFQ9NS37 354 aa18.33■□□□□ 0.52
SLF1-203ENST00000466957 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
SLF1-203ENST00000466957 EVX2Q03828 476 aa18.27■□□□□ 0.52
SLF1-203ENST00000466957 C19orf67A6NJJ6 358 aa18.26■□□□□ 0.51
SLF1-203ENST00000466957 CD44P16070 742 aaKnown RBP18.15■□□□□ 0.5
SLF1-203ENST00000466957 MIER1Q8N108 512 aa18.07■□□□□ 0.48
SLF1-203ENST00000466957 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
SLF1-203ENST00000466957 NPM1P06748 294 aaKnown RBP eCLIP18.06■□□□□ 0.48
SLF1-203ENST00000466957 MNX1P50219 401 aaPredicted RBP18.03■□□□□ 0.48
SLF1-203ENST00000466957 PLCD3Q8N3E9 789 aa18.01■□□□□ 0.47
SLF1-203ENST00000466957 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
SLF1-203ENST00000466957 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
SLF1-203ENST00000466957 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
SLF1-203ENST00000466957 GABBR2O75899 941 aa17.9■□□□□ 0.46
SLF1-203ENST00000466957 ZNF579Q8NAF0 562 aaKnown RBP17.83■□□□□ 0.44
SLF1-203ENST00000466957 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
SLF1-203ENST00000466957 TSPYL2Q9H2G4 693 aaPredicted RBP17.79■□□□□ 0.44
SLF1-203ENST00000466957 CLCN6P51797 869 aa17.74■□□□□ 0.43
SLF1-203ENST00000466957 PHF12Q96QT6 1004 aa17.74■□□□□ 0.43
SLF1-203ENST00000466957 VASPP50552 380 aaPredicted RBP17.72■□□□□ 0.43
SLF1-203ENST00000466957 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
SLF1-203ENST00000466957 GALR2O43603 387 aaPredicted RBP17.62■□□□□ 0.41
SLF1-203ENST00000466957 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms