RNA–Protein interactions for RNA: ENST00000560836.1

TCF12-219, Transcript of transcription factor 12, humanhuman

TSL 3

Gene TCF12, Length 212 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-219ENST00000560836 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
TCF12-219ENST00000560836 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
TCF12-219ENST00000560836 ABCC9O60706 1549 aa22.99■■□□□ 1.27
TCF12-219ENST00000560836 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
TCF12-219ENST00000560836 RB1CC1Q8TDY2 1594 aa21.94■■□□□ 1.1
TCF12-219ENST00000560836 NACADO15069 1562 aa21.85■■□□□ 1.09
TCF12-219ENST00000560836 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
TCF12-219ENST00000560836 ZCCHC6Q5VYS8 1495 aaKnown RBP21.53■■□□□ 1.04
TCF12-219ENST00000560836 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
TCF12-219ENST00000560836 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
TCF12-219ENST00000560836 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
TCF12-219ENST00000560836 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
TCF12-219ENST00000560836 BICRAQ9NZM4 1560 aa21.29■■□□□ 1
TCF12-219ENST00000560836 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
TCF12-219ENST00000560836 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
TCF12-219ENST00000560836 EIF4G1Q04637 1599 aaKnown RBP20.75■□□□□ 0.91
TCF12-219ENST00000560836 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
TCF12-219ENST00000560836 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
TCF12-219ENST00000560836 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
TCF12-219ENST00000560836 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
TCF12-219ENST00000560836 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
TCF12-219ENST00000560836 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
TCF12-219ENST00000560836 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
TCF12-219ENST00000560836 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
TCF12-219ENST00000560836 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
TCF12-219ENST00000560836 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
TCF12-219ENST00000560836 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
TCF12-219ENST00000560836 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
TCF12-219ENST00000560836 NESP48681 1621 aa19.82■□□□□ 0.76
TCF12-219ENST00000560836 WIZO95785 1651 aa19.8■□□□□ 0.76
TCF12-219ENST00000560836 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
TCF12-219ENST00000560836 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
TCF12-219ENST00000560836 CUX2O14529 1486 aa19.66■□□□□ 0.74
TCF12-219ENST00000560836 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
TCF12-219ENST00000560836 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
TCF12-219ENST00000560836 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
TCF12-219ENST00000560836 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
TCF12-219ENST00000560836 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
TCF12-219ENST00000560836 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
TCF12-219ENST00000560836 CFTRP13569 1480 aa19.41■□□□□ 0.7
TCF12-219ENST00000560836 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
TCF12-219ENST00000560836 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
TCF12-219ENST00000560836 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
TCF12-219ENST00000560836 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
TCF12-219ENST00000560836 WDR62O43379 1518 aa19.3■□□□□ 0.68
TCF12-219ENST00000560836 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
TCF12-219ENST00000560836 URB2Q14146 1524 aaKnown RBP19.19■□□□□ 0.66
TCF12-219ENST00000560836 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
TCF12-219ENST00000560836 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
TCF12-219ENST00000560836 ABCC8Q09428 1581 aa19■□□□□ 0.63
TCF12-219ENST00000560836 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
TCF12-219ENST00000560836 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
TCF12-219ENST00000560836 ZNF608Q9ULD9 1512 aaPredicted RBP18.93■□□□□ 0.62
TCF12-219ENST00000560836 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
TCF12-219ENST00000560836 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
TCF12-219ENST00000560836 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
TCF12-219ENST00000560836 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.62e-6■□□□□ 8.5
TCF12-219ENST00000560836 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
TCF12-219ENST00000560836 SOGA1O94964 1423 aa18.81■□□□□ 0.6
TCF12-219ENST00000560836 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
TCF12-219ENST00000560836 CUX1P39880 1505 aa18.79■□□□□ 0.6
TCF12-219ENST00000560836 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
TCF12-219ENST00000560836 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
TCF12-219ENST00000560836 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
TCF12-219ENST00000560836 FBLN2P98095 1184 aa18.72■□□□□ 0.59
TCF12-219ENST00000560836 CHD1O14646 1710 aa18.63■□□□□ 0.57
TCF12-219ENST00000560836 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
TCF12-219ENST00000560836 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
TCF12-219ENST00000560836 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.57
TCF12-219ENST00000560836 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
TCF12-219ENST00000560836 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
TCF12-219ENST00000560836 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
TCF12-219ENST00000560836 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
TCF12-219ENST00000560836 RIMBP3CA6NJZ7 1639 aa18.55■□□□□ 0.56
TCF12-219ENST00000560836 RIMBP3BA6NNM3 1639 aa18.55■□□□□ 0.56
TCF12-219ENST00000560836 RIMBP3Q9UFD9 1639 aa18.55■□□□□ 0.56
TCF12-219ENST00000560836 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
TCF12-219ENST00000560836 TOP2BQ02880 1626 aa18.54■□□□□ 0.56
TCF12-219ENST00000560836 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
TCF12-219ENST00000560836 ARHGEF11O15085 1522 aa18.52■□□□□ 0.56
TCF12-219ENST00000560836 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.55
TCF12-219ENST00000560836 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
TCF12-219ENST00000560836 SYNJ2O15056 1496 aa18.49■□□□□ 0.55
TCF12-219ENST00000560836 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
TCF12-219ENST00000560836 CYB5RLQ6IPT4 315 aa18.47■□□□□ 0.55
TCF12-219ENST00000560836 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.54
TCF12-219ENST00000560836 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
TCF12-219ENST00000560836 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
TCF12-219ENST00000560836 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.53
TCF12-219ENST00000560836 ADAMTS12P58397 1594 aa18.32■□□□□ 0.52
TCF12-219ENST00000560836 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
TCF12-219ENST00000560836 NUP160Q12769 1436 aa18.25■□□□□ 0.51
TCF12-219ENST00000560836 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
TCF12-219ENST00000560836 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
TCF12-219ENST00000560836 IGF1RP08069 1367 aa18.21■□□□□ 0.51
TCF12-219ENST00000560836 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
TCF12-219ENST00000560836 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
TCF12-219ENST00000560836 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
TCF12-219ENST00000560836 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
TCF12-219ENST00000560836 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms