RNA–Protein interactions for RNA: ENST00000560191.1

TCF12-216, Transcript of transcription factor 12, humanhuman

TSL 2

Gene TCF12, Length 1,205 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-216ENST00000560191 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
TCF12-216ENST00000560191 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
TCF12-216ENST00000560191 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
TCF12-216ENST00000560191 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
TCF12-216ENST00000560191 FOXD1Q16676 465 aa21.72■■□□□ 1.07
TCF12-216ENST00000560191 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
TCF12-216ENST00000560191 MSH5O43196 834 aa20.32■□□□□ 0.84
TCF12-216ENST00000560191 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
TCF12-216ENST00000560191 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
TCF12-216ENST00000560191 ADRA2BP18089 450 aa20.22■□□□□ 0.83
TCF12-216ENST00000560191 POTEDQ86YR6 584 aa19.91■□□□□ 0.78
TCF12-216ENST00000560191 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
TCF12-216ENST00000560191 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
TCF12-216ENST00000560191 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
TCF12-216ENST00000560191 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
TCF12-216ENST00000560191 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
TCF12-216ENST00000560191 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
TCF12-216ENST00000560191 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
TCF12-216ENST00000560191 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
TCF12-216ENST00000560191 KCNA4P22459 653 aa17.59■□□□□ 0.41
TCF12-216ENST00000560191 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
TCF12-216ENST00000560191 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
TCF12-216ENST00000560191 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
TCF12-216ENST00000560191 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
TCF12-216ENST00000560191 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
TCF12-216ENST00000560191 C1QBPQ07021 282 aaKnown RBP17.08■□□□□ 0.32
TCF12-216ENST00000560191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.33e-6■□□□□ 11.3
TCF12-216ENST00000560191 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
TCF12-216ENST00000560191 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
TCF12-216ENST00000560191 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
TCF12-216ENST00000560191 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
TCF12-216ENST00000560191 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
TCF12-216ENST00000560191 CAPN15O75808 1086 aa16.29■□□□□ 0.2
TCF12-216ENST00000560191 DSG3P32926 999 aa16.24■□□□□ 0.19
TCF12-216ENST00000560191 ZBTB22O15209 634 aa16.2■□□□□ 0.18
TCF12-216ENST00000560191 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
TCF12-216ENST00000560191 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
TCF12-216ENST00000560191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
TCF12-216ENST00000560191 APLP2Q06481 763 aa16.06■□□□□ 0.16
TCF12-216ENST00000560191 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
TCF12-216ENST00000560191 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
TCF12-216ENST00000560191 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
TCF12-216ENST00000560191 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
TCF12-216ENST00000560191 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
TCF12-216ENST00000560191 ABCB7O75027 752 aa15.94■□□□□ 0.14
TCF12-216ENST00000560191 POLA2Q14181 598 aa15.6■□□□□ 0.09
TCF12-216ENST00000560191 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
TCF12-216ENST00000560191 POTEHQ6S545 545 aa15.59■□□□□ 0.09
TCF12-216ENST00000560191 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
TCF12-216ENST00000560191 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
TCF12-216ENST00000560191 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
TCF12-216ENST00000560191 CHRDL2Q6WN34 429 aa15.16■□□□□ 0.02
TCF12-216ENST00000560191 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
TCF12-216ENST00000560191 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
TCF12-216ENST00000560191 REM2Q8IYK8 340 aaPredicted RBP14.99□□□□□ -0.01
TCF12-216ENST00000560191 FBLN2P98095 1184 aa14.88□□□□□ -0.03
TCF12-216ENST00000560191 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
TCF12-216ENST00000560191 PITPNM1O00562 1244 aa14.83□□□□□ -0.04
TCF12-216ENST00000560191 SPDYE2BA6NHP3 402 aa14.81□□□□□ -0.04
TCF12-216ENST00000560191 SPDYE6P0CI01 402 aa14.81□□□□□ -0.04
TCF12-216ENST00000560191 SPDYE2Q495Y8 402 aa14.81□□□□□ -0.04
TCF12-216ENST00000560191 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
TCF12-216ENST00000560191 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
TCF12-216ENST00000560191 SSUH2Q9Y2M2 353 aa14.63□□□□□ -0.07
TCF12-216ENST00000560191 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
TCF12-216ENST00000560191 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
TCF12-216ENST00000560191 FKBP8Q14318 412 aa14.56□□□□□ -0.08
TCF12-216ENST00000560191 SPDYE1Q8NFV5 336 aaPredicted RBP14.55□□□□□ -0.08
TCF12-216ENST00000560191 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
TCF12-216ENST00000560191 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
TCF12-216ENST00000560191 HAX1O00165 279 aa14.51□□□□□ -0.09
TCF12-216ENST00000560191 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
TCF12-216ENST00000560191 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
TCF12-216ENST00000560191 EVX2Q03828 476 aa14.38□□□□□ -0.11
TCF12-216ENST00000560191 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
TCF12-216ENST00000560191 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
TCF12-216ENST00000560191 PROM2Q8N271 834 aa14.27□□□□□ -0.13
TCF12-216ENST00000560191 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
TCF12-216ENST00000560191 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
TCF12-216ENST00000560191 GABBR2O75899 941 aa14.03□□□□□ -0.16
TCF12-216ENST00000560191 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
TCF12-216ENST00000560191 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
TCF12-216ENST00000560191 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
TCF12-216ENST00000560191 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
TCF12-216ENST00000560191 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
TCF12-216ENST00000560191 CLCN6P51797 869 aa13.77□□□□□ -0.21
TCF12-216ENST00000560191 MIER1Q8N108 512 aa13.77□□□□□ -0.21
TCF12-216ENST00000560191 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
TCF12-216ENST00000560191 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
TCF12-216ENST00000560191 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
TCF12-216ENST00000560191 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
TCF12-216ENST00000560191 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
TCF12-216ENST00000560191 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
TCF12-216ENST00000560191 LHX8Q68G74 356 aa13.69□□□□□ -0.22
TCF12-216ENST00000560191 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
TCF12-216ENST00000560191 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
TCF12-216ENST00000560191 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
TCF12-216ENST00000560191 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
TCF12-216ENST00000560191 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
TCF12-216ENST00000560191 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms