RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 NISCHQ9Y2I1 1504 aa43.98■■■■■ 4.63
BRD4-202ENST00000360016 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
BRD4-202ENST00000360016 ZCCHC6Q5VYS8 1495 aaKnown RBP37.08■■■■□ 3.53
BRD4-202ENST00000360016 SHROOM4Q9ULL8 1493 aa36.59■■■■□ 3.45
BRD4-202ENST00000360016 DCAF8L2P0C7V8 631 aa36.31■■■■□ 3.4
BRD4-202ENST00000360016 DCAF1Q9Y4B6 1507 aa36.27■■■■□ 3.4
BRD4-202ENST00000360016 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
BRD4-202ENST00000360016 MYO15BQ96JP2 1530 aa35.54■■■■□ 3.28
BRD4-202ENST00000360016 ABCC9O60706 1549 aa35.41■■■■□ 3.26
BRD4-202ENST00000360016 NACADO15069 1562 aa35.18■■■■□ 3.22
BRD4-202ENST00000360016 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
BRD4-202ENST00000360016 RB1CC1Q8TDY2 1594 aa34.73■■■■□ 3.15
BRD4-202ENST00000360016 RSF1Q96T23 1441 aaPredicted RBP34.45■■■■□ 3.1
BRD4-202ENST00000360016 CHIC1Q5VXU3 224 aa34.35■■■■□ 3.09
BRD4-202ENST00000360016 CECR2Q9BXF3 1484 aa34.21■■■■□ 3.07
BRD4-202ENST00000360016 UNC13AQ9UPW8 1703 aa34.12■■■■□ 3.05
BRD4-202ENST00000360016 MROH2BQ7Z745 1585 aa34.07■■■■□ 3.04
BRD4-202ENST00000360016 BAZ1AQ9NRL2 1556 aaPredicted RBP33.88■■■■□ 3.01
BRD4-202ENST00000360016 WIZO95785 1651 aa33.84■■■■□ 3.01
BRD4-202ENST00000360016 BICRAQ9NZM4 1560 aa33.73■■■□□ 2.99
BRD4-202ENST00000360016 SMARCA4P51532 1647 aa33.66■■■□□ 2.98
BRD4-202ENST00000360016 PABPN1Q86U42 306 aaKnown RBP eCLIP33.62■■■□□ 2.97
BRD4-202ENST00000360016 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
BRD4-202ENST00000360016 TRIM41Q8WV44 630 aa33.31■■■□□ 2.92
BRD4-202ENST00000360016 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
BRD4-202ENST00000360016 CCDC88BA6NC98 1476 aa33.17■■■□□ 2.9
BRD4-202ENST00000360016 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
BRD4-202ENST00000360016 LOC105371045A0A1W2PR82 267 aa33.16■■■□□ 2.9
BRD4-202ENST00000360016 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
BRD4-202ENST00000360016 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
BRD4-202ENST00000360016 FAM9AQ8IZU1 332 aaPredicted RBP32.82■■■□□ 2.84
BRD4-202ENST00000360016 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
BRD4-202ENST00000360016 ABCC8Q09428 1581 aa32.75■■■□□ 2.83
BRD4-202ENST00000360016 PCGF6Q9BYE7 350 aa32.56■■■□□ 2.8
BRD4-202ENST00000360016 NCAPD3P42695 1498 aa32.5■■■□□ 2.79
BRD4-202ENST00000360016 PPARGC1BQ86YN6 1023 aaKnown RBP32.5■■■□□ 2.79
BRD4-202ENST00000360016 HMGXB3Q12766 1538 aa32.48■■■□□ 2.79
BRD4-202ENST00000360016 EHMT2Q96KQ7 1210 aa32.41■■■□□ 2.78
BRD4-202ENST00000360016 WRNQ14191 1432 aaPredicted RBP eCLIP32.39■■■□□ 2.78
BRD4-202ENST00000360016 SOGA1O94964 1423 aa32.29■■■□□ 2.76
BRD4-202ENST00000360016 SYNJ1O43426 1573 aa32.24■■■□□ 2.75
BRD4-202ENST00000360016 EEA1Q15075 1411 aa32.23■■■□□ 2.75
BRD4-202ENST00000360016 RUSC2Q8N2Y8 1516 aa32.14■■■□□ 2.74
BRD4-202ENST00000360016 TRIM26Q12899 539 aaPredicted RBP32.12■■■□□ 2.73
BRD4-202ENST00000360016 CSRNP3Q8WYN3 585 aa32.1■■■□□ 2.73
BRD4-202ENST00000360016 HRCP23327 699 aa32.05■■■□□ 2.72
BRD4-202ENST00000360016 CC2D2AQ9P2K1 1620 aa32.01■■■□□ 2.71
BRD4-202ENST00000360016 TOP2BQ02880 1626 aa32■■■□□ 2.71
BRD4-202ENST00000360016 CFTRP13569 1480 aa32■■■□□ 2.71
BRD4-202ENST00000360016 BIVM-ERCC5R4GMW8 1640 aa31.94■■■□□ 2.7
BRD4-202ENST00000360016 TNIKQ9UKE5 1360 aa31.92■■■□□ 2.7
BRD4-202ENST00000360016 GOLGA3Q08378 1498 aa31.87■■■□□ 2.69
BRD4-202ENST00000360016 CEP162Q5TB80 1403 aa31.84■■■□□ 2.69
BRD4-202ENST00000360016 PRDM2Q13029 1718 aa31.81■■■□□ 2.68
BRD4-202ENST00000360016 UBTFP17480 764 aaKnown RBP31.81■■■□□ 2.68
BRD4-202ENST00000360016 CEP164Q9UPV0 1460 aa31.79■■■□□ 2.68
BRD4-202ENST00000360016 KIF21BO75037 1637 aa31.79■■■□□ 2.68
BRD4-202ENST00000360016 CUX1P39880 1505 aa31.79■■■□□ 2.68
BRD4-202ENST00000360016 CADPSQ9ULU8 1353 aa31.76■■■□□ 2.68
BRD4-202ENST00000360016 RAPGEF2Q9Y4G8 1499 aa31.57■■■□□ 2.64
BRD4-202ENST00000360016 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
BRD4-202ENST00000360016 PRXQ9BXM0 1461 aa31.46■■■□□ 2.63
BRD4-202ENST00000360016 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
BRD4-202ENST00000360016 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
BRD4-202ENST00000360016 CLIP1P30622 1438 aa31.42■■■□□ 2.62
BRD4-202ENST00000360016 NESP48681 1621 aa31.33■■■□□ 2.61
BRD4-202ENST00000360016 FGD5Q6ZNL6 1462 aa31.33■■■□□ 2.61
BRD4-202ENST00000360016 CUX2O14529 1486 aa31.28■■■□□ 2.6
BRD4-202ENST00000360016 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.59
BRD4-202ENST00000360016 VPS8Q8N3P4 1428 aa31.23■■■□□ 2.59
BRD4-202ENST00000360016 DNMBPQ6XZF7 1577 aa31.23■■■□□ 2.59
BRD4-202ENST00000360016 TTBK1Q5TCY1 1321 aaPredicted RBP31.2■■■□□ 2.59
BRD4-202ENST00000360016 RANGAP1P46060 587 aaPredicted RBP31.18■■■□□ 2.58
BRD4-202ENST00000360016 IGF1RP08069 1367 aa31.18■■■□□ 2.58
BRD4-202ENST00000360016 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
BRD4-202ENST00000360016 ZEB1P37275 1124 aaPredicted RBP31.15■■■□□ 2.58
BRD4-202ENST00000360016 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
BRD4-202ENST00000360016 POLA1P09884 1462 aaPredicted RBP31.07■■■□□ 2.56
BRD4-202ENST00000360016 RAD54L2Q9Y4B4 1467 aa31.04■■■□□ 2.56
BRD4-202ENST00000360016 PDS5BQ9NTI5 1447 aa31.03■■■□□ 2.56
BRD4-202ENST00000360016 ABCA10Q8WWZ4 1543 aa31.03■■■□□ 2.56
BRD4-202ENST00000360016 CARMIL1Q5VZK9 1371 aa31.03■■■□□ 2.56
BRD4-202ENST00000360016 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
BRD4-202ENST00000360016 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
BRD4-202ENST00000360016 APLP2Q06481 763 aa30.98■■■□□ 2.55
BRD4-202ENST00000360016 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
BRD4-202ENST00000360016 ARHGAP35Q9NRY4 1499 aa30.89■■■□□ 2.53
BRD4-202ENST00000360016 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
BRD4-202ENST00000360016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.84■■■□□ 2.53
BRD4-202ENST00000360016 CUL7Q14999 1698 aa30.78■■■□□ 2.52
BRD4-202ENST00000360016 CCER1Q8TC90 406 aaPredicted RBP30.77■■■□□ 2.52
BRD4-202ENST00000360016 ABCA5Q8WWZ7 1642 aa30.71■■■□□ 2.51
BRD4-202ENST00000360016 TDRD9Q8NDG6 1382 aaKnown RBP30.68■■■□□ 2.5
BRD4-202ENST00000360016 GAPVD1Q14C86 1478 aa30.65■■■□□ 2.5
BRD4-202ENST00000360016 KANK4Q5T7N3 995 aaPredicted RBP30.64■■■□□ 2.5
BRD4-202ENST00000360016 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
BRD4-202ENST00000360016 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
BRD4-202ENST00000360016 HNRNPUL2Q1KMD3 747 aaKnown RBP30.58■■■□□ 2.49
BRD4-202ENST00000360016 CTTNBP2Q8WZ74 1663 aa30.57■■■□□ 2.48
BRD4-202ENST00000360016 EFCAB5A4FU69 1503 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms