RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
NDUFA9-202ENST00000396655 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
NDUFA9-202ENST00000396655 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
NDUFA9-202ENST00000396655 ABCC9O60706 1549 aa23.76■■□□□ 1.39
NDUFA9-202ENST00000396655 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
NDUFA9-202ENST00000396655 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
NDUFA9-202ENST00000396655 NACADO15069 1562 aa22.85■■□□□ 1.25
NDUFA9-202ENST00000396655 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.25
NDUFA9-202ENST00000396655 MYO15BQ96JP2 1530 aa22.74■■□□□ 1.23
NDUFA9-202ENST00000396655 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
NDUFA9-202ENST00000396655 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
NDUFA9-202ENST00000396655 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
NDUFA9-202ENST00000396655 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
NDUFA9-202ENST00000396655 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
NDUFA9-202ENST00000396655 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
NDUFA9-202ENST00000396655 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
NDUFA9-202ENST00000396655 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
NDUFA9-202ENST00000396655 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
NDUFA9-202ENST00000396655 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
NDUFA9-202ENST00000396655 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
NDUFA9-202ENST00000396655 DNAJC5Q9H3Z4 198 aa21.34■■□□□ 1.01
NDUFA9-202ENST00000396655 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
NDUFA9-202ENST00000396655 SMARCA4P51532 1647 aa21.08■□□□□ 0.97
NDUFA9-202ENST00000396655 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
NDUFA9-202ENST00000396655 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
NDUFA9-202ENST00000396655 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
NDUFA9-202ENST00000396655 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
NDUFA9-202ENST00000396655 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
NDUFA9-202ENST00000396655 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
NDUFA9-202ENST00000396655 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
NDUFA9-202ENST00000396655 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
NDUFA9-202ENST00000396655 WIZO95785 1651 aa20.63■□□□□ 0.89
NDUFA9-202ENST00000396655 CUX2O14529 1486 aa20.61■□□□□ 0.89
NDUFA9-202ENST00000396655 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
NDUFA9-202ENST00000396655 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
NDUFA9-202ENST00000396655 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
NDUFA9-202ENST00000396655 NESP48681 1621 aa20.51■□□□□ 0.87
NDUFA9-202ENST00000396655 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
NDUFA9-202ENST00000396655 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
NDUFA9-202ENST00000396655 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
NDUFA9-202ENST00000396655 CFTRP13569 1480 aa20.3■□□□□ 0.84
NDUFA9-202ENST00000396655 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
NDUFA9-202ENST00000396655 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
NDUFA9-202ENST00000396655 CCDC88BA6NC98 1476 aa20.22■□□□□ 0.83
NDUFA9-202ENST00000396655 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
NDUFA9-202ENST00000396655 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
NDUFA9-202ENST00000396655 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
NDUFA9-202ENST00000396655 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
NDUFA9-202ENST00000396655 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
NDUFA9-202ENST00000396655 WDR62O43379 1518 aa20.12■□□□□ 0.81
NDUFA9-202ENST00000396655 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
NDUFA9-202ENST00000396655 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
NDUFA9-202ENST00000396655 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
NDUFA9-202ENST00000396655 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
NDUFA9-202ENST00000396655 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
NDUFA9-202ENST00000396655 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
NDUFA9-202ENST00000396655 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
NDUFA9-202ENST00000396655 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
NDUFA9-202ENST00000396655 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
NDUFA9-202ENST00000396655 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
NDUFA9-202ENST00000396655 CUX1P39880 1505 aa19.61■□□□□ 0.73
NDUFA9-202ENST00000396655 SOGA1O94964 1423 aa19.6■□□□□ 0.73
NDUFA9-202ENST00000396655 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
NDUFA9-202ENST00000396655 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
NDUFA9-202ENST00000396655 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
NDUFA9-202ENST00000396655 EIF4G3O43432 1585 aaKnown RBP19.54■□□□□ 0.72
NDUFA9-202ENST00000396655 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
NDUFA9-202ENST00000396655 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.721e-6■■■■■ 31.8
NDUFA9-202ENST00000396655 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
NDUFA9-202ENST00000396655 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
NDUFA9-202ENST00000396655 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
NDUFA9-202ENST00000396655 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
NDUFA9-202ENST00000396655 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
NDUFA9-202ENST00000396655 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
NDUFA9-202ENST00000396655 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
NDUFA9-202ENST00000396655 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
NDUFA9-202ENST00000396655 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
NDUFA9-202ENST00000396655 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
NDUFA9-202ENST00000396655 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
NDUFA9-202ENST00000396655 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
NDUFA9-202ENST00000396655 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
NDUFA9-202ENST00000396655 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
NDUFA9-202ENST00000396655 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
NDUFA9-202ENST00000396655 FBLN2P98095 1184 aa19.31■□□□□ 0.68
NDUFA9-202ENST00000396655 CHD1O14646 1710 aa19.31■□□□□ 0.68
NDUFA9-202ENST00000396655 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
NDUFA9-202ENST00000396655 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
NDUFA9-202ENST00000396655 PBRM1Q86U86 1689 aa19.27■□□□□ 0.67
NDUFA9-202ENST00000396655 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
NDUFA9-202ENST00000396655 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
NDUFA9-202ENST00000396655 TRHP20396 242 aaPredicted RBP19.18■□□□□ 0.66
NDUFA9-202ENST00000396655 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
NDUFA9-202ENST00000396655 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
NDUFA9-202ENST00000396655 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
NDUFA9-202ENST00000396655 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
NDUFA9-202ENST00000396655 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
NDUFA9-202ENST00000396655 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
NDUFA9-202ENST00000396655 NUP160Q12769 1436 aa19.07■□□□□ 0.64
NDUFA9-202ENST00000396655 IGF1RP08069 1367 aa19.05■□□□□ 0.64
NDUFA9-202ENST00000396655 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 232.6 ms