RNA–Protein interactions for RNA: ENST00000560948.1

TCF12-221, Transcript of transcription factor 12, humanhuman

TSL 2

Gene TCF12, Length 440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-221ENST00000560948 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
TCF12-221ENST00000560948 ABCC9O60706 1549 aa14.2□□□□□ -0.14
TCF12-221ENST00000560948 CCDC180Q9P1Z9 1646 aa13.85□□□□□ -0.19
TCF12-221ENST00000560948 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
TCF12-221ENST00000560948 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
TCF12-221ENST00000560948 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
TCF12-221ENST00000560948 NACADO15069 1562 aa13.17□□□□□ -0.3
TCF12-221ENST00000560948 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
TCF12-221ENST00000560948 UNC13AQ9UPW8 1703 aa13.01□□□□□ -0.33
TCF12-221ENST00000560948 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
TCF12-221ENST00000560948 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
TCF12-221ENST00000560948 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
TCF12-221ENST00000560948 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
TCF12-221ENST00000560948 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
TCF12-221ENST00000560948 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
TCF12-221ENST00000560948 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
TCF12-221ENST00000560948 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
TCF12-221ENST00000560948 ZCCHC6Q5VYS8 1495 aaKnown RBP12.64□□□□□ -0.39
TCF12-221ENST00000560948 DCAF1Q9Y4B6 1507 aa12.6□□□□□ -0.39
TCF12-221ENST00000560948 CHIC1Q5VXU3 224 aa12.41□□□□□ -0.42
TCF12-221ENST00000560948 CUX2O14529 1486 aa12.34□□□□□ -0.43
TCF12-221ENST00000560948 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
TCF12-221ENST00000560948 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
TCF12-221ENST00000560948 NESP48681 1621 aa12.11□□□□□ -0.47
TCF12-221ENST00000560948 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
TCF12-221ENST00000560948 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
TCF12-221ENST00000560948 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
TCF12-221ENST00000560948 TRIM41Q8WV44 630 aa12.05□□□□□ -0.48
TCF12-221ENST00000560948 AEBP2Q6ZN18 517 aaPredicted RBP12.04□□□□□ -0.48
TCF12-221ENST00000560948 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
TCF12-221ENST00000560948 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
TCF12-221ENST00000560948 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
TCF12-221ENST00000560948 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
TCF12-221ENST00000560948 KIF21AQ7Z4S6 1674 aa11.92□□□□□ -0.5
TCF12-221ENST00000560948 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
TCF12-221ENST00000560948 PDS5BQ9NTI5 1447 aa11.91□□□□□ -0.5
TCF12-221ENST00000560948 PEG3Q9GZU2 1588 aa11.87□□□□□ -0.51
TCF12-221ENST00000560948 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
TCF12-221ENST00000560948 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
TCF12-221ENST00000560948 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
TCF12-221ENST00000560948 WDR62O43379 1518 aa11.79□□□□□ -0.52
TCF12-221ENST00000560948 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
TCF12-221ENST00000560948 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
TCF12-221ENST00000560948 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
TCF12-221ENST00000560948 WIZO95785 1651 aa11.65□□□□□ -0.54
TCF12-221ENST00000560948 RIMBP3CA6NJZ7 1639 aa11.61□□□□□ -0.55
TCF12-221ENST00000560948 RIMBP3BA6NNM3 1639 aa11.61□□□□□ -0.55
TCF12-221ENST00000560948 RIMBP3Q9UFD9 1639 aa11.61□□□□□ -0.55
TCF12-221ENST00000560948 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
TCF12-221ENST00000560948 CFTRP13569 1480 aa11.59□□□□□ -0.55
TCF12-221ENST00000560948 ARHGEF11O15085 1522 aa11.55□□□□□ -0.56
TCF12-221ENST00000560948 ZNF608Q9ULD9 1512 aaPredicted RBP11.51□□□□□ -0.57
TCF12-221ENST00000560948 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
TCF12-221ENST00000560948 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
TCF12-221ENST00000560948 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
TCF12-221ENST00000560948 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
TCF12-221ENST00000560948 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
TCF12-221ENST00000560948 EIF4G3O43432 1585 aaKnown RBP11.44□□□□□ -0.58
TCF12-221ENST00000560948 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
TCF12-221ENST00000560948 ARAP1Q96P48 1450 aa11.42□□□□□ -0.58
TCF12-221ENST00000560948 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
TCF12-221ENST00000560948 FBLN2P98095 1184 aa11.4□□□□□ -0.58
TCF12-221ENST00000560948 CHD1O14646 1710 aa11.38□□□□□ -0.59
TCF12-221ENST00000560948 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■□□□□ 8.5
TCF12-221ENST00000560948 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
TCF12-221ENST00000560948 ABCC8Q09428 1581 aa11.35□□□□□ -0.59
TCF12-221ENST00000560948 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
TCF12-221ENST00000560948 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
TCF12-221ENST00000560948 POLA1P09884 1462 aaPredicted RBP11.29□□□□□ -0.6
TCF12-221ENST00000560948 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
TCF12-221ENST00000560948 SNAPC4Q5SXM2 1469 aa11.26□□□□□ -0.61
TCF12-221ENST00000560948 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
TCF12-221ENST00000560948 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
TCF12-221ENST00000560948 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
TCF12-221ENST00000560948 SOGA1O94964 1423 aa11.23□□□□□ -0.61
TCF12-221ENST00000560948 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
TCF12-221ENST00000560948 MAGI1Q96QZ7 1491 aaPredicted RBP11.19□□□□□ -0.62
TCF12-221ENST00000560948 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
TCF12-221ENST00000560948 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
TCF12-221ENST00000560948 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
TCF12-221ENST00000560948 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
TCF12-221ENST00000560948 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
TCF12-221ENST00000560948 CUX1P39880 1505 aa11.11□□□□□ -0.63
TCF12-221ENST00000560948 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
TCF12-221ENST00000560948 ERCC6L2Q5T890 1561 aa11.07□□□□□ -0.64
TCF12-221ENST00000560948 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.64
TCF12-221ENST00000560948 GRIN2AQ12879 1464 aa11.02□□□□□ -0.65
TCF12-221ENST00000560948 PHF23Q9BUL5 403 aaPredicted RBP11.02□□□□□ -0.65
TCF12-221ENST00000560948 ABCA10Q8WWZ4 1543 aa11.02□□□□□ -0.65
TCF12-221ENST00000560948 CEP170Q5SW79 1584 aa11.02□□□□□ -0.65
TCF12-221ENST00000560948 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
TCF12-221ENST00000560948 NUP160Q12769 1436 aa10.98□□□□□ -0.65
TCF12-221ENST00000560948 KIF13AQ9H1H9 1805 aa10.96□□□□□ -0.65
TCF12-221ENST00000560948 SHROOM2Q13796 1616 aa10.95□□□□□ -0.66
TCF12-221ENST00000560948 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
TCF12-221ENST00000560948 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
TCF12-221ENST00000560948 WRNQ14191 1432 aaPredicted RBP eCLIP10.93□□□□□ -0.66
TCF12-221ENST00000560948 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
TCF12-221ENST00000560948 ABCC10Q5T3U5 1492 aa10.9□□□□□ -0.66
TCF12-221ENST00000560948 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms