RNA–Protein interactions for RNA: ENST00000392687.4

CERS6-202, Transcript of ceramide synthase 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CERS6, Length 6,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS6-202ENST00000392687 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
CERS6-202ENST00000392687 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
CERS6-202ENST00000392687 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
CERS6-202ENST00000392687 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
CERS6-202ENST00000392687 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
CERS6-202ENST00000392687 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
CERS6-202ENST00000392687 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
CERS6-202ENST00000392687 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
CERS6-202ENST00000392687 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
CERS6-202ENST00000392687 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
CERS6-202ENST00000392687 APLP2Q06481 763 aa22.35■■□□□ 1.17
CERS6-202ENST00000392687 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
CERS6-202ENST00000392687 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
CERS6-202ENST00000392687 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
CERS6-202ENST00000392687 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
CERS6-202ENST00000392687 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
CERS6-202ENST00000392687 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
CERS6-202ENST00000392687 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
CERS6-202ENST00000392687 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
CERS6-202ENST00000392687 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
CERS6-202ENST00000392687 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
CERS6-202ENST00000392687 HRCP23327 699 aa21.51■■□□□ 1.03
CERS6-202ENST00000392687 NEFLP07196 543 aa21.44■■□□□ 1.02
CERS6-202ENST00000392687 TRIM26Q12899 539 aaPredicted RBP21.44■■□□□ 1.02
CERS6-202ENST00000392687 ITGAEP38570 1179 aa21.43■■□□□ 1.02
CERS6-202ENST00000392687 CNGB1Q14028 1251 aaPredicted RBP21.38■■□□□ 1.01
CERS6-202ENST00000392687 MYT1Q01538 1121 aa21.29■■□□□ 1
CERS6-202ENST00000392687 HNRNPUL2Q1KMD3 747 aaKnown RBP21.28■■□□□ 1
CERS6-202ENST00000392687 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
CERS6-202ENST00000392687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
CERS6-202ENST00000392687 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
CERS6-202ENST00000392687 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
CERS6-202ENST00000392687 BCANQ96GW7 911 aa20.88■□□□□ 0.93
CERS6-202ENST00000392687 MYT1LQ9UL68 1186 aa20.8■□□□□ 0.92
CERS6-202ENST00000392687 DAXXQ9UER7 740 aaPredicted RBP20.8■□□□□ 0.92
CERS6-202ENST00000392687 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
CERS6-202ENST00000392687 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
CERS6-202ENST00000392687 SLC4A1APQ9BWU0 796 aaKnown RBP20.63■□□□□ 0.89
CERS6-202ENST00000392687 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
CERS6-202ENST00000392687 CLSPNQ9HAW4 1339 aa20.47■□□□□ 0.87
CERS6-202ENST00000392687 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
CERS6-202ENST00000392687 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
CERS6-202ENST00000392687 ZNF316A6NFI3 1004 aaPredicted RBP20.41■□□□□ 0.86
CERS6-202ENST00000392687 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
CERS6-202ENST00000392687 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
CERS6-202ENST00000392687 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
CERS6-202ENST00000392687 ACIN1Q9UKV3 1341 aaKnown RBP20.29■□□□□ 0.84
CERS6-202ENST00000392687 ARID3CA6NKF2 412 aa20.26■□□□□ 0.83
CERS6-202ENST00000392687 ANP32CO43423 234 aa20.24■□□□□ 0.83
CERS6-202ENST00000392687 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
CERS6-202ENST00000392687 CDK11AQ9UQ88 783 aaPredicted RBP20.19■□□□□ 0.82
CERS6-202ENST00000392687 ABCC9O60706 1549 aa20.12■□□□□ 0.81
CERS6-202ENST00000392687 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
CERS6-202ENST00000392687 FKBP8Q14318 412 aa20.04■□□□□ 0.8
CERS6-202ENST00000392687 FBLN2P98095 1184 aa20■□□□□ 0.79
CERS6-202ENST00000392687 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
CERS6-202ENST00000392687 SLC24A1O60721 1099 aa19.94■□□□□ 0.78
CERS6-202ENST00000392687 SALL2Q9Y467 1007 aaPredicted RBP19.94■□□□□ 0.78
CERS6-202ENST00000392687 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
CERS6-202ENST00000392687 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
CERS6-202ENST00000392687 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
CERS6-202ENST00000392687 ZNF777Q9ULD5 760 aaPredicted RBP19.86■□□□□ 0.77
CERS6-202ENST00000392687 IRX6P78412 446 aaPredicted RBP19.86■□□□□ 0.77
CERS6-202ENST00000392687 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
CERS6-202ENST00000392687 FAM9BQ8IZU0 186 aa19.85■□□□□ 0.77
CERS6-202ENST00000392687 HNRNPUQ00839 825 aaKnown RBP eCLIP19.83■□□□□ 0.76
CERS6-202ENST00000392687 NBR1Q14596 966 aa19.83■□□□□ 0.76
CERS6-202ENST00000392687 ANP32AP39687 249 aaKnown RBP19.81■□□□□ 0.76
CERS6-202ENST00000392687 EIF5BO60841 1220 aaKnown RBP19.8■□□□□ 0.76
CERS6-202ENST00000392687 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
CERS6-202ENST00000392687 MIER1Q8N108 512 aa19.78■□□□□ 0.76
CERS6-202ENST00000392687 ZBTB47Q9UFB7 747 aaPredicted RBP19.75■□□□□ 0.75
CERS6-202ENST00000392687 ARXQ96QS3 562 aa19.74■□□□□ 0.75
CERS6-202ENST00000392687 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
CERS6-202ENST00000392687 CHIC2Q9UKJ5 165 aa19.68■□□□□ 0.74
CERS6-202ENST00000392687 TONSLQ96HA7 1378 aa19.61■□□□□ 0.73
CERS6-202ENST00000392687 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
CERS6-202ENST00000392687 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
CERS6-202ENST00000392687 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
CERS6-202ENST00000392687 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
CERS6-202ENST00000392687 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
CERS6-202ENST00000392687 CCDC136Q96JN2 1154 aa19.52■□□□□ 0.72
CERS6-202ENST00000392687 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
CERS6-202ENST00000392687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.719e-9■□□□□ 10.7
CERS6-202ENST00000392687 HSP90AA1P07900 732 aaKnown RBP19.47■□□□□ 0.71
CERS6-202ENST00000392687 NEFMP07197 916 aa19.47■□□□□ 0.71
CERS6-202ENST00000392687 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
CERS6-202ENST00000392687 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
CERS6-202ENST00000392687 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
CERS6-202ENST00000392687 SUPT16HQ9Y5B9 1047 aaKnown RBP19.29■□□□□ 0.68
CERS6-202ENST00000392687 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
CERS6-202ENST00000392687 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
CERS6-202ENST00000392687 ANP32BQ92688 251 aaKnown RBP19.26■□□□□ 0.67
CERS6-202ENST00000392687 RTN4Q9NQC3 1192 aaKnown RBP19.25■□□□□ 0.67
CERS6-202ENST00000392687 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
CERS6-202ENST00000392687 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
CERS6-202ENST00000392687 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
CERS6-202ENST00000392687 CLIP1P30622 1438 aa19.18■□□□□ 0.66
CERS6-202ENST00000392687 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
CERS6-202ENST00000392687 TPRNQ4KMQ1 711 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms