RNA–Protein interactions for RNA: ENST00000462813.1

DCTN1-216, Transcript of dynactin subunit 1, humanhuman

TSL 1 (best)

Gene DCTN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-216ENST00000462813 NISCHQ9Y2I1 1504 aa42.76■■■■■ 4.44
DCTN1-216ENST00000462813 CCDC180Q9P1Z9 1646 aa38■■■■□ 3.67
DCTN1-216ENST00000462813 ABCC9O60706 1549 aa36.59■■■■□ 3.45
DCTN1-216ENST00000462813 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
DCTN1-216ENST00000462813 NACADO15069 1562 aa35.49■■■■□ 3.27
DCTN1-216ENST00000462813 RB1CC1Q8TDY2 1594 aa35.46■■■■□ 3.27
DCTN1-216ENST00000462813 DCAF8L2P0C7V8 631 aa35.43■■■■□ 3.26
DCTN1-216ENST00000462813 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
DCTN1-216ENST00000462813 MYO15BQ96JP2 1530 aa35.38■■■■□ 3.25
DCTN1-216ENST00000462813 UNC13AQ9UPW8 1703 aa34.91■■■■□ 3.18
DCTN1-216ENST00000462813 SCRIBQ14160 1630 aa34.65■■■■□ 3.14
DCTN1-216ENST00000462813 BICRAQ9NZM4 1560 aa34.38■■■■□ 3.09
DCTN1-216ENST00000462813 PABPN1Q86U42 306 aaKnown RBP eCLIP34.17■■■■□ 3.06
DCTN1-216ENST00000462813 SHROOM4Q9ULL8 1493 aa34■■■■□ 3.03
DCTN1-216ENST00000462813 EIF4G1Q04637 1599 aaKnown RBP33.42■■■□□ 2.94
DCTN1-216ENST00000462813 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
DCTN1-216ENST00000462813 CC2D2AQ9P2K1 1620 aa33.2■■■□□ 2.91
DCTN1-216ENST00000462813 SMARCA4P51532 1647 aa33.18■■■□□ 2.9
DCTN1-216ENST00000462813 BAZ1AQ9NRL2 1556 aaPredicted RBP33.15■■■□□ 2.9
DCTN1-216ENST00000462813 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
DCTN1-216ENST00000462813 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
DCTN1-216ENST00000462813 SMARCA2P51531 1590 aa32.81■■■□□ 2.84
DCTN1-216ENST00000462813 PEG3Q9GZU2 1588 aa32.81■■■□□ 2.84
DCTN1-216ENST00000462813 ATAD2BQ9ULI0 1458 aa32.77■■■□□ 2.84
DCTN1-216ENST00000462813 WIZO95785 1651 aa32.75■■■□□ 2.83
DCTN1-216ENST00000462813 RSF1Q96T23 1441 aaPredicted RBP32.68■■■□□ 2.82
DCTN1-216ENST00000462813 NCAPD3P42695 1498 aa32.66■■■□□ 2.82
DCTN1-216ENST00000462813 HMGXB3Q12766 1538 aa32.64■■■□□ 2.82
DCTN1-216ENST00000462813 BAZ1BQ9UIG0 1483 aaKnown RBP32.56■■■□□ 2.8
DCTN1-216ENST00000462813 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
DCTN1-216ENST00000462813 SUPT5HO00267 1087 aaKnown RBP32.15■■■□□ 2.74
DCTN1-216ENST00000462813 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
DCTN1-216ENST00000462813 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
DCTN1-216ENST00000462813 NESP48681 1621 aa31.82■■■□□ 2.68
DCTN1-216ENST00000462813 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
DCTN1-216ENST00000462813 CADPSQ9ULU8 1353 aa31.7■■■□□ 2.67
DCTN1-216ENST00000462813 CFTRP13569 1480 aa31.65■■■□□ 2.66
DCTN1-216ENST00000462813 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.65
DCTN1-216ENST00000462813 ERCC6Q03468 1493 aa31.5■■■□□ 2.63
DCTN1-216ENST00000462813 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
DCTN1-216ENST00000462813 FANCD2Q9BXW9 1451 aa31.41■■■□□ 2.62
DCTN1-216ENST00000462813 CEP164Q9UPV0 1460 aa31.35■■■□□ 2.61
DCTN1-216ENST00000462813 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
DCTN1-216ENST00000462813 MRC2Q9UBG0 1479 aa31.21■■■□□ 2.59
DCTN1-216ENST00000462813 WDR62O43379 1518 aa31.13■■■□□ 2.57
DCTN1-216ENST00000462813 URB2Q14146 1524 aaKnown RBP31.09■■■□□ 2.57
DCTN1-216ENST00000462813 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
DCTN1-216ENST00000462813 CUX2O14529 1486 aa31.01■■■□□ 2.56
DCTN1-216ENST00000462813 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
DCTN1-216ENST00000462813 ABCC8Q09428 1581 aa30.97■■■□□ 2.55
DCTN1-216ENST00000462813 CUX1P39880 1505 aa30.93■■■□□ 2.54
DCTN1-216ENST00000462813 BIVM-ERCC5R4GMW8 1640 aa30.87■■■□□ 2.53
DCTN1-216ENST00000462813 SYNJ1O43426 1573 aa30.83■■■□□ 2.53
DCTN1-216ENST00000462813 WRNQ14191 1432 aaPredicted RBP eCLIP30.82■■■□□ 2.52
DCTN1-216ENST00000462813 TOP2BQ02880 1626 aa30.82■■■□□ 2.52
DCTN1-216ENST00000462813 FGD5Q6ZNL6 1462 aa30.74■■■□□ 2.51
DCTN1-216ENST00000462813 POLA1P09884 1462 aaPredicted RBP30.73■■■□□ 2.51
DCTN1-216ENST00000462813 TARBP1Q13395 1621 aaKnown RBP30.68■■■□□ 2.5
DCTN1-216ENST00000462813 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
DCTN1-216ENST00000462813 WDR97A6NE52 1622 aa30.64■■■□□ 2.5
DCTN1-216ENST00000462813 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
DCTN1-216ENST00000462813 SOGA1O94964 1423 aa30.56■■■□□ 2.48
DCTN1-216ENST00000462813 EIF4G3O43432 1585 aaKnown RBP30.5■■■□□ 2.47
DCTN1-216ENST00000462813 ZNF608Q9ULD9 1512 aaPredicted RBP30.48■■■□□ 2.47
DCTN1-216ENST00000462813 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
DCTN1-216ENST00000462813 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
DCTN1-216ENST00000462813 ABCA5Q8WWZ7 1642 aa30.39■■■□□ 2.46
DCTN1-216ENST00000462813 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.45
DCTN1-216ENST00000462813 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
DCTN1-216ENST00000462813 TDRD9Q8NDG6 1382 aaKnown RBP30.31■■■□□ 2.44
DCTN1-216ENST00000462813 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
DCTN1-216ENST00000462813 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
DCTN1-216ENST00000462813 GRIN2BQ13224 1484 aa30.19■■■□□ 2.42
DCTN1-216ENST00000462813 CHD1O14646 1710 aa30.14■■■□□ 2.42
DCTN1-216ENST00000462813 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
DCTN1-216ENST00000462813 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
DCTN1-216ENST00000462813 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
DCTN1-216ENST00000462813 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
DCTN1-216ENST00000462813 ADAMTS12P58397 1594 aa30.06■■■□□ 2.4
DCTN1-216ENST00000462813 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
DCTN1-216ENST00000462813 CUL7Q14999 1698 aa30.03■■■□□ 2.4
DCTN1-216ENST00000462813 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
DCTN1-216ENST00000462813 IGF1RP08069 1367 aa29.9■■■□□ 2.38
DCTN1-216ENST00000462813 FHAD1B1AJZ9 1412 aa29.89■■■□□ 2.38
DCTN1-216ENST00000462813 EEA1Q15075 1411 aa29.86■■■□□ 2.37
DCTN1-216ENST00000462813 FBLN2P98095 1184 aa29.83■■■□□ 2.37
DCTN1-216ENST00000462813 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
DCTN1-216ENST00000462813 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
DCTN1-216ENST00000462813 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
DCTN1-216ENST00000462813 CEP170Q5SW79 1584 aa29.72■■■□□ 2.35
DCTN1-216ENST00000462813 FAM9AQ8IZU1 332 aaPredicted RBP29.71■■■□□ 2.35
DCTN1-216ENST00000462813 OSCARQ8IYS5 282 aa29.7■■■□□ 2.35
DCTN1-216ENST00000462813 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
DCTN1-216ENST00000462813 CSRNP3Q8WYN3 585 aa29.68■■■□□ 2.34
DCTN1-216ENST00000462813 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
DCTN1-216ENST00000462813 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
DCTN1-216ENST00000462813 NUP160Q12769 1436 aa29.64■■■□□ 2.34
DCTN1-216ENST00000462813 CTTNBP2Q8WZ74 1663 aa29.64■■■□□ 2.34
DCTN1-216ENST00000462813 KIF21BO75037 1637 aa29.63■■■□□ 2.33
DCTN1-216ENST00000462813 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms