RNA–Protein interactions for RNA: ENST00000534317.1

PDE3B-205, Transcript of phosphodiesterase 3B, humanhuman

TSL 1 (best)

Gene PDE3B, Length 5,521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-205ENST00000534317 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
PDE3B-205ENST00000534317 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
PDE3B-205ENST00000534317 NISCHQ9Y2I1 1504 aa30.49■■■□□ 2.47
PDE3B-205ENST00000534317 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
PDE3B-205ENST00000534317 EHMT2Q96KQ7 1210 aa29.69■■■□□ 2.34
PDE3B-205ENST00000534317 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
PDE3B-205ENST00000534317 APLP2Q06481 763 aa29.28■■■□□ 2.28
PDE3B-205ENST00000534317 FAM9AQ8IZU1 332 aaPredicted RBP28.97■■■□□ 2.23
PDE3B-205ENST00000534317 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
PDE3B-205ENST00000534317 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
PDE3B-205ENST00000534317 ZEB1P37275 1124 aaPredicted RBP28.53■■■□□ 2.16
PDE3B-205ENST00000534317 CENPBP07199 599 aaPredicted RBP28.5■■■□□ 2.15
PDE3B-205ENST00000534317 TRIM41Q8WV44 630 aa28.45■■■□□ 2.15
PDE3B-205ENST00000534317 CCER1Q8TC90 406 aaPredicted RBP28.39■■■□□ 2.13
PDE3B-205ENST00000534317 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
PDE3B-205ENST00000534317 ERICH6Q7L0X2 663 aa28.23■■■□□ 2.11
PDE3B-205ENST00000534317 ATP1B4Q9UN42 357 aaPredicted RBP28.13■■■□□ 2.09
PDE3B-205ENST00000534317 UBTFP17480 764 aaKnown RBP28.12■■■□□ 2.09
PDE3B-205ENST00000534317 NEFLP07196 543 aa27.86■■■□□ 2.05
PDE3B-205ENST00000534317 YTHDC1Q96MU7 727 aaKnown RBP27.81■■■□□ 2.04
PDE3B-205ENST00000534317 PPARGC1BQ86YN6 1023 aaKnown RBP27.67■■■□□ 2.02
PDE3B-205ENST00000534317 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
PDE3B-205ENST00000534317 MYT1Q01538 1121 aa27.54■■■□□ 2
PDE3B-205ENST00000534317 HRCP23327 699 aa27.43■■□□□ 1.98
PDE3B-205ENST00000534317 ITGAEP38570 1179 aa27.25■■□□□ 1.95
PDE3B-205ENST00000534317 LOC105371045A0A1W2PR82 267 aa27.24■■□□□ 1.95
PDE3B-205ENST00000534317 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
PDE3B-205ENST00000534317 HNRNPUL2Q1KMD3 747 aaKnown RBP27.11■■□□□ 1.93
PDE3B-205ENST00000534317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
PDE3B-205ENST00000534317 POLR3GLQ9BT43 218 aa27.08■■□□□ 1.93
PDE3B-205ENST00000534317 DAXXQ9UER7 740 aaPredicted RBP27.03■■□□□ 1.92
PDE3B-205ENST00000534317 MYT1LQ9UL68 1186 aa26.98■■□□□ 1.91
PDE3B-205ENST00000534317 CNGB1Q14028 1251 aaPredicted RBP26.79■■□□□ 1.88
PDE3B-205ENST00000534317 DIEXFQ68CQ4 756 aaKnown RBP26.76■■□□□ 1.87
PDE3B-205ENST00000534317 FAM50AQ14320 339 aaKnown RBP26.56■■□□□ 1.84
PDE3B-205ENST00000534317 SLC4A1APQ9BWU0 796 aaKnown RBP26.51■■□□□ 1.83
PDE3B-205ENST00000534317 RTL5Q5HYW3 569 aaPredicted RBP26.45■■□□□ 1.82
PDE3B-205ENST00000534317 CLSPNQ9HAW4 1339 aa26.42■■□□□ 1.82
PDE3B-205ENST00000534317 TRIM52Q96A61 297 aa26.42■■□□□ 1.82
PDE3B-205ENST00000534317 ZNF316A6NFI3 1004 aaPredicted RBP26.41■■□□□ 1.82
PDE3B-205ENST00000534317 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
PDE3B-205ENST00000534317 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
PDE3B-205ENST00000534317 GTF3C3Q9Y5Q9 886 aa26.23■■□□□ 1.79
PDE3B-205ENST00000534317 ANP32CO43423 234 aa26.23■■□□□ 1.79
PDE3B-205ENST00000534317 BCANQ96GW7 911 aa26.19■■□□□ 1.78
PDE3B-205ENST00000534317 ABCC9O60706 1549 aa26.17■■□□□ 1.78
PDE3B-205ENST00000534317 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
PDE3B-205ENST00000534317 CDK11AQ9UQ88 783 aaPredicted RBP26.07■■□□□ 1.76
PDE3B-205ENST00000534317 CSRNP3Q8WYN3 585 aa25.91■■□□□ 1.74
PDE3B-205ENST00000534317 ZBTB47Q9UFB7 747 aaPredicted RBP25.89■■□□□ 1.74
PDE3B-205ENST00000534317 ACIN1Q9UKV3 1341 aaKnown RBP25.86■■□□□ 1.73
PDE3B-205ENST00000534317 FBLN2P98095 1184 aa25.86■■□□□ 1.73
PDE3B-205ENST00000534317 P3H3Q8IVL6 736 aa25.81■■□□□ 1.72
PDE3B-205ENST00000534317 CANXP27824 592 aaKnown RBP25.79■■□□□ 1.72
PDE3B-205ENST00000534317 ARID3CA6NKF2 412 aa25.69■■□□□ 1.7
PDE3B-205ENST00000534317 NEFMP07197 916 aa25.67■■□□□ 1.7
PDE3B-205ENST00000534317 ANP32AP39687 249 aaKnown RBP25.64■■□□□ 1.69
PDE3B-205ENST00000534317 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
PDE3B-205ENST00000534317 BCL11AQ9H165 835 aa25.58■■□□□ 1.69
PDE3B-205ENST00000534317 SLC24A1O60721 1099 aa25.57■■□□□ 1.68
PDE3B-205ENST00000534317 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
PDE3B-205ENST00000534317 FKBP8Q14318 412 aa25.48■■□□□ 1.67
PDE3B-205ENST00000534317 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
PDE3B-205ENST00000534317 NPM2Q86SE8 214 aaKnown RBP25.47■■□□□ 1.67
PDE3B-205ENST00000534317 HNRNPUQ00839 825 aaKnown RBP eCLIP25.4■■□□□ 1.66
PDE3B-205ENST00000534317 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
PDE3B-205ENST00000534317 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
PDE3B-205ENST00000534317 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
PDE3B-205ENST00000534317 CHGAP10645 457 aaKnown RBP25.23■■□□□ 1.63
PDE3B-205ENST00000534317 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
PDE3B-205ENST00000534317 UPF2Q9HAU5 1272 aaKnown RBP25.22■■□□□ 1.63
PDE3B-205ENST00000534317 HSP90AA1P07900 732 aaKnown RBP25.2■■□□□ 1.62
PDE3B-205ENST00000534317 ANP32BQ92688 251 aaKnown RBP25.19■■□□□ 1.62
PDE3B-205ENST00000534317 ESF1Q9H501 851 aaKnown RBP25.19■■□□□ 1.62
PDE3B-205ENST00000534317 CHIC2Q9UKJ5 165 aa25.18■■□□□ 1.62
PDE3B-205ENST00000534317 TMC1Q8TDI8 760 aa25.17■■□□□ 1.62
PDE3B-205ENST00000534317 SALL2Q9Y467 1007 aaPredicted RBP25.16■■□□□ 1.62
PDE3B-205ENST00000534317 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
PDE3B-205ENST00000534317 CCDC136Q96JN2 1154 aa25.14■■□□□ 1.61
PDE3B-205ENST00000534317 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.09■■□□□ 1.61
PDE3B-205ENST00000534317 MRS2Q9HD23 443 aa25.08■■□□□ 1.61
PDE3B-205ENST00000534317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.05■■□□□ 1.6
PDE3B-205ENST00000534317 WDR43Q15061 677 aaKnown RBP eCLIP25.03■■□□□ 1.6
PDE3B-205ENST00000534317 MTUS2Q5JR59 1369 aa25.03■■□□□ 1.6
PDE3B-205ENST00000534317 MIER1Q8N108 512 aa25.02■■□□□ 1.6
PDE3B-205ENST00000534317 EIF5BO60841 1220 aaKnown RBP25.02■■□□□ 1.6
PDE3B-205ENST00000534317 NPM1P06748 294 aaKnown RBP eCLIP25.02■■□□□ 1.6
PDE3B-205ENST00000534317 TSPY4P0CV99 314 aa25.01■■□□□ 1.59
PDE3B-205ENST00000534317 TSPY10P0CW01 314 aa25.01■■□□□ 1.59
PDE3B-205ENST00000534317 CLIP1P30622 1438 aa24.99■■□□□ 1.59
PDE3B-205ENST00000534317 KDM2AQ9Y2K7 1162 aa24.98■■□□□ 1.59
PDE3B-205ENST00000534317 NBR1Q14596 966 aa24.92■■□□□ 1.58
PDE3B-205ENST00000534317 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
PDE3B-205ENST00000534317 EIF4G2P78344 907 aaKnown RBP eCLIP24.91■■□□□ 1.58
PDE3B-205ENST00000534317 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
PDE3B-205ENST00000534317 IRX6P78412 446 aaPredicted RBP24.87■■□□□ 1.57
PDE3B-205ENST00000534317 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
PDE3B-205ENST00000534317 RRP7BPQ9NSQ0 103 aa24.81■■□□□ 1.56
PDE3B-205ENST00000534317 EEA1Q15075 1411 aa24.79■■□□□ 1.56
PDE3B-205ENST00000534317 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms