Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC14.31□□□□□ -0.121e-7■■□□□ 13.4
MATR3P43243 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.271e-7■■□□□ 13.4
MATR3P43243 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.591e-7■■□□□ 13.4
MATR3P43243 CADM1-214ENST00000543249 565 ntTSL 46.43□□□□□ -1.381e-7■■□□□ 13.4
MATR3P43243 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.78□□□□□ -1.81e-6■■□□□ 13.4
MATR3P43243 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.05□□□□□ -1.285e-7■■□□□ 13.3
MATR3P43243 CHD6-209ENST00000482596 599 ntTSL 1 (best)6.66□□□□□ -1.345e-7■■□□□ 13.3
MATR3P43243 CHD6-204ENST00000440647 536 ntTSL 36.39□□□□□ -1.395e-7■■□□□ 13.3
MATR3P43243 LINC00852-201ENST00000475197 1328 ntBASIC12.7□□□□□ -0.387e-23■■□□□ 13.3
MATR3P43243 LINC00852-202ENST00000538717 1327 nt10.76□□□□□ -0.697e-23■■□□□ 13.3
MATR3P43243 ETNK1-204ENST00000539974 441 ntTSL 23.94□□□□□ -1.782e-6■■□□□ 13.3
MATR3P43243 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.36■□□□□ 0.371e-6■■□□□ 13.3
MATR3P43243 RTN3-211ENST00000542238 735 ntTSL 316.83■□□□□ 0.281e-6■■□□□ 13.3
MATR3P43243 RTN3-214ENST00000545432 545 ntTSL 415.87■□□□□ 0.131e-6■■□□□ 13.3
MATR3P43243 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.88□□□□□ -0.031e-6■■□□□ 13.3
MATR3P43243 RTN3-207ENST00000536011 992 ntTSL 214.34□□□□□ -0.111e-6■■□□□ 13.3
MATR3P43243 RTN3-212ENST00000543123 712 ntTSL 214.34□□□□□ -0.111e-6■■□□□ 13.3
MATR3P43243 RTN3-213ENST00000543552 529 ntTSL 414.34□□□□□ -0.111e-6■■□□□ 13.3
MATR3P43243 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC12.92□□□□□ -0.341e-6■■□□□ 13.3
MATR3P43243 RTN3-209ENST00000538995 814 ntTSL 212.61□□□□□ -0.391e-6■■□□□ 13.3
MATR3P43243 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC12.58□□□□□ -0.41e-6■■□□□ 13.3
MATR3P43243 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC12.16□□□□□ -0.461e-6■■□□□ 13.3
MATR3P43243 RTN3-208ENST00000537981 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.491e-6■■□□□ 13.3
MATR3P43243 RTN3-201ENST00000338850 493 ntTSL 211.62□□□□□ -0.551e-6■■□□□ 13.3
MATR3P43243 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC10.18□□□□□ -0.781e-6■■□□□ 13.3
MATR3P43243 EPB41-210ENST00000482464 675 ntTSL 219.11■□□□□ 0.655e-9■■□□□ 13.3
MATR3P43243 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.56■□□□□ 0.565e-9■■□□□ 13.3
MATR3P43243 ECT2-212ENST00000444250 627 ntTSL 33.97□□□□□ -1.772e-6■■□□□ 13.3
MATR3P43243 ECT2-209ENST00000437296 2266 ntTSL 53.73□□□□□ -1.815e-9■■□□□ 13.3
MATR3P43243 ECT2-213ENST00000460860 497 ntTSL 32.4□□□□□ -2.035e-9■■□□□ 13.3
MATR3P43243 CDHR3-209ENST00000472116 993 ntTSL 211.04□□□□□ -0.645e-6■■□□□ 13.3
MATR3P43243 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.76■□□□□ 0.758e-7■■□□□ 13.3
MATR3P43243 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.168e-7■■□□□ 13.3
MATR3P43243 SDC2-207ENST00000522911 677 ntTSL 3 BASIC10.16□□□□□ -0.788e-7■■□□□ 13.3
MATR3P43243 TTC3-205ENST00000411496 893 ntTSL 35.01□□□□□ -1.613e-8■■□□□ 13.3
MATR3P43243 TTC3-220ENST00000487711 925 ntTSL 53.75□□□□□ -1.813e-8■■□□□ 13.3
MATR3P43243 TTC3-214ENST00000472398 2305 ntTSL 1 (best)3.65□□□□□ -1.823e-8■■□□□ 13.3
MATR3P43243 CLEC2D-206ENST00000444971 1508 ntTSL 1 (best)11.19□□□□□ -0.621e-6■■□□□ 13.3
MATR3P43243 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.981e-6■■□□□ 13.3
MATR3P43243 CLEC2D-204ENST00000325960 1552 ntTSL 27.06□□□□□ -1.281e-6■■□□□ 13.3
MATR3P43243 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.371e-6■■□□□ 13.3
MATR3P43243 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.37□□□□□ -1.391e-6■■□□□ 13.3
MATR3P43243 CLEC2D-210ENST00000479877 1855 ntTSL 25.57□□□□□ -1.521e-6■■□□□ 13.3
MATR3P43243 CLEC2D-213ENST00000536355 571 ntTSL 45.49□□□□□ -1.531e-6■■□□□ 13.3
MATR3P43243 CLEC2D-211ENST00000487752 287 ntTSL 55.11□□□□□ -1.591e-6■■□□□ 13.3
MATR3P43243 CLEC2D-212ENST00000492359 541 ntTSL 45.03□□□□□ -1.61e-6■■□□□ 13.3
MATR3P43243 CLEC2D-208ENST00000466035 778 ntTSL 34.38□□□□□ -1.711e-6■■□□□ 13.3
MATR3P43243 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.94□□□□□ -1.941e-6■■□□□ 13.3
MATR3P43243 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.94□□□□□ -1.941e-6■■□□□ 13.3
MATR3P43243 TMEM116-215ENST00000552374 1408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.494e-7■■□□□ 13.3
MATR3P43243 TMEM116-203ENST00000546537 599 ntTSL 511.61□□□□□ -0.554e-7■■□□□ 13.3
MATR3P43243 TMEM116-213ENST00000550831 1446 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.844e-7■■□□□ 13.3
MATR3P43243 TMEM116-209ENST00000550020 572 ntTSL 49.7□□□□□ -0.864e-7■■□□□ 13.3
MATR3P43243 TMEM116-217ENST00000552801 1397 ntTSL 59.54□□□□□ -0.884e-7■■□□□ 13.3
MATR3P43243 TMEM116-205ENST00000547878 1716 ntTSL 29.32□□□□□ -0.924e-7■■□□□ 13.3
MATR3P43243 TMEM116-207ENST00000549425 615 ntAPPRIS ALT2 TSL 39.04□□□□□ -0.964e-7■■□□□ 13.3
MATR3P43243 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.044e-7■■□□□ 13.3
MATR3P43243 TMEM116-214ENST00000551297 660 ntTSL 38.46□□□□□ -1.064e-7■■□□□ 13.3
MATR3P43243 TMEM116-206ENST00000548283 3640 ntTSL 57.47□□□□□ -1.214e-7■■□□□ 13.3
MATR3P43243 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.264e-7■■□□□ 13.3
MATR3P43243 TMEM116-212ENST00000550800 718 ntAPPRIS ALT2 TSL 35.77□□□□□ -1.494e-7■■□□□ 13.3
MATR3P43243 TMEM116-210ENST00000550037 640 ntAPPRIS ALT2 TSL 34.37□□□□□ -1.714e-7■■□□□ 13.3
MATR3P43243 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.623e-9■■□□□ 13.3
MATR3P43243 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.483e-9■■□□□ 13.3
MATR3P43243 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.39■■□□□ 1.343e-9■■□□□ 13.3
MATR3P43243 XPO6-209ENST00000566073 715 ntTSL 523.31■■□□□ 1.323e-9■■□□□ 13.3
MATR3P43243 ZNF37BP-204ENST00000473592 2929 ntTSL 1 (best)18.68■□□□□ 0.583e-9■■□□□ 13.3
MATR3P43243 VAV2-205ENST00000486113 523 ntTSL 213.86□□□□□ -0.195e-22■■□□□ 13.3
MATR3P43243 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC11.4□□□□□ -0.583e-9■■□□□ 13.3
MATR3P43243 XPO6-216ENST00000569951 262 ntTSL 510.05□□□□□ -0.83e-9■■□□□ 13.3
MATR3P43243 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.64■■□□□ 1.211e-6■■□□□ 13.2
MATR3P43243 SLC13A3-209ENST00000468915 1597 ntTSL 516.17■□□□□ 0.181e-6■■□□□ 13.2
MATR3P43243 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.271e-6■■□□□ 13.2
MATR3P43243 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC11.52□□□□□ -0.571e-6■■□□□ 13.2
MATR3P43243 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.42□□□□□ -1.061e-6■■□□□ 13.2
MATR3P43243 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.05■□□□□ 0.325e-6■■□□□ 13.2
MATR3P43243 STAU2-204ENST00000518767 1146 ntTSL 1 (best)16.12■□□□□ 0.175e-6■■□□□ 13.2
MATR3P43243 STAU2-203ENST00000518502 687 ntTSL 312.04□□□□□ -0.485e-6■■□□□ 13.2
MATR3P43243 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC11.98□□□□□ -0.495e-6■■□□□ 13.2
MATR3P43243 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC11.79□□□□□ -0.525e-6■■□□□ 13.2
MATR3P43243 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC11.1□□□□□ -0.635e-6■■□□□ 13.2
MATR3P43243 STAU2-205ENST00000518981 1746 ntTSL 26.59□□□□□ -1.365e-6■■□□□ 13.2
MATR3P43243 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.88□□□□□ -1.795e-6■■□□□ 13.2
MATR3P43243 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.55□□□□□ -1.845e-6■■□□□ 13.2
MATR3P43243 ARHGEF1-223ENST00000617585 737 ntTSL 224.36■■□□□ 1.493e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-218ENST00000599589 2636 ntTSL 1 (best)21.57■■□□□ 1.043e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-210ENST00000594521 826 ntTSL 518.73■□□□□ 0.593e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.87■□□□□ 0.453e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.443e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.04■□□□□ 0.163e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.113e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.083e-24■■□□□ 13.2
MATR3P43243 ARHGEF1-220ENST00000600274 3439 ntTSL 1 (best)12.83□□□□□ -0.363e-24■■□□□ 13.2
MATR3P43243 QKI-210ENST00000537883 1106 ntTSL 39.52□□□□□ -0.898e-7■■□□□ 13.2
MATR3P43243 QKI-215ENST00000544823 597 ntTSL 23.24□□□□□ -1.898e-7■■□□□ 13.2
MATR3P43243 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.022e-6■■□□□ 13.2
MATR3P43243 TMCO3-204ENST00000462877 491 ntTSL 28.57□□□□□ -1.046e-12■■□□□ 13.2
MATR3P43243 SASH1-209ENST00000637469 523 ntTSL 47.42□□□□□ -1.222e-6■■□□□ 13.2
MATR3P43243 TMCO3-211ENST00000622371 2822 ntTSL 46.95□□□□□ -1.36e-12■■□□□ 13.2
MATR3P43243 SASH1-203ENST00000470750 617 ntTSL 34.06□□□□□ -1.762e-6■■□□□ 13.2
Retrieved 100 of 16,209 protein–RNA pairs in 69.8 ms