RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 NISCHQ9Y2I1 1504 aa28.06■■■□□ 2.08
TMEM116-203ENST00000546537 ABCC9O60706 1549 aa26.04■■□□□ 1.76
TMEM116-203ENST00000546537 CCDC180Q9P1Z9 1646 aa25.5■■□□□ 1.67
TMEM116-203ENST00000546537 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
TMEM116-203ENST00000546537 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
TMEM116-203ENST00000546537 NACADO15069 1562 aa24.22■■□□□ 1.47
TMEM116-203ENST00000546537 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
TMEM116-203ENST00000546537 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
TMEM116-203ENST00000546537 BICRAQ9NZM4 1560 aa23.87■■□□□ 1.41
TMEM116-203ENST00000546537 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
TMEM116-203ENST00000546537 MYO15BQ96JP2 1530 aa23.7■■□□□ 1.38
TMEM116-203ENST00000546537 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
TMEM116-203ENST00000546537 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
TMEM116-203ENST00000546537 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
TMEM116-203ENST00000546537 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
TMEM116-203ENST00000546537 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
TMEM116-203ENST00000546537 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
TMEM116-203ENST00000546537 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
TMEM116-203ENST00000546537 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
TMEM116-203ENST00000546537 CUX2O14529 1486 aa22.73■■□□□ 1.23
TMEM116-203ENST00000546537 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
TMEM116-203ENST00000546537 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
TMEM116-203ENST00000546537 NESP48681 1621 aa22.2■■□□□ 1.14
TMEM116-203ENST00000546537 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
TMEM116-203ENST00000546537 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
TMEM116-203ENST00000546537 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
TMEM116-203ENST00000546537 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
TMEM116-203ENST00000546537 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
TMEM116-203ENST00000546537 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
TMEM116-203ENST00000546537 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
TMEM116-203ENST00000546537 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
TMEM116-203ENST00000546537 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
TMEM116-203ENST00000546537 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
TMEM116-203ENST00000546537 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
TMEM116-203ENST00000546537 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
TMEM116-203ENST00000546537 MRC2Q9UBG0 1479 aa21.69■■□□□ 1.06
TMEM116-203ENST00000546537 WDR62O43379 1518 aa21.68■■□□□ 1.06
TMEM116-203ENST00000546537 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
TMEM116-203ENST00000546537 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
TMEM116-203ENST00000546537 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
TMEM116-203ENST00000546537 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
TMEM116-203ENST00000546537 RIMBP3CA6NJZ7 1639 aa21.39■■□□□ 1.01
TMEM116-203ENST00000546537 RIMBP3BA6NNM3 1639 aa21.39■■□□□ 1.01
TMEM116-203ENST00000546537 RIMBP3Q9UFD9 1639 aa21.39■■□□□ 1.01
TMEM116-203ENST00000546537 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
TMEM116-203ENST00000546537 WIZO95785 1651 aa21.34■■□□□ 1.01
TMEM116-203ENST00000546537 CFTRP13569 1480 aa21.26■□□□□ 0.99
TMEM116-203ENST00000546537 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
TMEM116-203ENST00000546537 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
TMEM116-203ENST00000546537 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
TMEM116-203ENST00000546537 PRDM2Q13029 1718 aa21.08■□□□□ 0.97
TMEM116-203ENST00000546537 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
TMEM116-203ENST00000546537 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
TMEM116-203ENST00000546537 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
TMEM116-203ENST00000546537 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
TMEM116-203ENST00000546537 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
TMEM116-203ENST00000546537 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
TMEM116-203ENST00000546537 CHD1O14646 1710 aa20.96■□□□□ 0.95
TMEM116-203ENST00000546537 TOPBP1Q92547 1522 aa20.93■□□□□ 0.94
TMEM116-203ENST00000546537 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
TMEM116-203ENST00000546537 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
TMEM116-203ENST00000546537 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
TMEM116-203ENST00000546537 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
TMEM116-203ENST00000546537 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
TMEM116-203ENST00000546537 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
TMEM116-203ENST00000546537 CCDC88BA6NC98 1476 aa20.76■□□□□ 0.91
TMEM116-203ENST00000546537 FBLN2P98095 1184 aa20.76■□□□□ 0.91
TMEM116-203ENST00000546537 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
TMEM116-203ENST00000546537 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
TMEM116-203ENST00000546537 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
TMEM116-203ENST00000546537 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
TMEM116-203ENST00000546537 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
TMEM116-203ENST00000546537 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
TMEM116-203ENST00000546537 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
TMEM116-203ENST00000546537 SOGA1O94964 1423 aa20.54■□□□□ 0.88
TMEM116-203ENST00000546537 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
TMEM116-203ENST00000546537 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
TMEM116-203ENST00000546537 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
TMEM116-203ENST00000546537 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
TMEM116-203ENST00000546537 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
TMEM116-203ENST00000546537 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
TMEM116-203ENST00000546537 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
TMEM116-203ENST00000546537 CUX1P39880 1505 aa20.33■□□□□ 0.85
TMEM116-203ENST00000546537 ERCC6L2Q5T890 1561 aa20.31■□□□□ 0.84
TMEM116-203ENST00000546537 KIF13AQ9H1H9 1805 aa20.28■□□□□ 0.84
TMEM116-203ENST00000546537 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
TMEM116-203ENST00000546537 CEP170Q5SW79 1584 aa20.22■□□□□ 0.83
TMEM116-203ENST00000546537 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
TMEM116-203ENST00000546537 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
TMEM116-203ENST00000546537 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
TMEM116-203ENST00000546537 NUP160Q12769 1436 aa20.15■□□□□ 0.82
TMEM116-203ENST00000546537 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
TMEM116-203ENST00000546537 ILDR1Q86SU0 546 aaPredicted RBP20.07■□□□□ 0.8
TMEM116-203ENST00000546537 KDM4FA0A1W2PPD8 638 aa20.04■□□□□ 0.8
TMEM116-203ENST00000546537 ABCC10Q5T3U5 1492 aa20.04■□□□□ 0.8
TMEM116-203ENST00000546537 FAM69CQ0P6D2 419 aa20.01■□□□□ 0.79
TMEM116-203ENST00000546537 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
TMEM116-203ENST00000546537 PRG4Q92954 1404 aaPredicted RBP19.99■□□□□ 0.79
TMEM116-203ENST00000546537 DIP2BQ9P265 1576 aa19.99■□□□□ 0.79
TMEM116-203ENST00000546537 MAPKBP1O60336 1514 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms