RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
TMEM116-205ENST00000547878 ABCC9O60706 1549 aa18.14■□□□□ 0.5
TMEM116-205ENST00000547878 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
TMEM116-205ENST00000547878 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
TMEM116-205ENST00000547878 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
TMEM116-205ENST00000547878 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMEM116-205ENST00000547878 NACADO15069 1562 aa16.77■□□□□ 0.28
TMEM116-205ENST00000547878 UNC13AQ9UPW8 1703 aa16.68■□□□□ 0.26
TMEM116-205ENST00000547878 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
TMEM116-205ENST00000547878 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
TMEM116-205ENST00000547878 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
TMEM116-205ENST00000547878 CECR2Q9BXF3 1484 aa16.36■□□□□ 0.21
TMEM116-205ENST00000547878 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
TMEM116-205ENST00000547878 DNAJC5Q9H3Z4 198 aa16.29■□□□□ 0.2
TMEM116-205ENST00000547878 SHROOM4Q9ULL8 1493 aa16.21■□□□□ 0.19
TMEM116-205ENST00000547878 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
TMEM116-205ENST00000547878 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
TMEM116-205ENST00000547878 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
TMEM116-205ENST00000547878 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
TMEM116-205ENST00000547878 DCAF1Q9Y4B6 1507 aa16.02■□□□□ 0.15
TMEM116-205ENST00000547878 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
TMEM116-205ENST00000547878 CUX2O14529 1486 aa15.75■□□□□ 0.11
TMEM116-205ENST00000547878 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
TMEM116-205ENST00000547878 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
TMEM116-205ENST00000547878 NESP48681 1621 aa15.48■□□□□ 0.07
TMEM116-205ENST00000547878 ATAD2BQ9ULI0 1458 aa15.42■□□□□ 0.06
TMEM116-205ENST00000547878 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
TMEM116-205ENST00000547878 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
TMEM116-205ENST00000547878 HMGXB3Q12766 1538 aa15.34■□□□□ 0.05
TMEM116-205ENST00000547878 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
TMEM116-205ENST00000547878 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
TMEM116-205ENST00000547878 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
TMEM116-205ENST00000547878 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
TMEM116-205ENST00000547878 LAMC3Q9Y6N6 1575 aa15.22■□□□□ 0.03
TMEM116-205ENST00000547878 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
TMEM116-205ENST00000547878 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
TMEM116-205ENST00000547878 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
TMEM116-205ENST00000547878 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
TMEM116-205ENST00000547878 MRC2Q9UBG0 1479 aa15.06■□□□□ 0
TMEM116-205ENST00000547878 WDR62O43379 1518 aa15.05■□□□□ -0
TMEM116-205ENST00000547878 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
TMEM116-205ENST00000547878 CADPSQ9ULU8 1353 aa15.02□□□□□ -0.01
TMEM116-205ENST00000547878 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
TMEM116-205ENST00000547878 MYT1Q01538 1121 aa14.94□□□□□ -0.02
TMEM116-205ENST00000547878 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
TMEM116-205ENST00000547878 RIMBP3CA6NJZ7 1639 aa14.87□□□□□ -0.03
TMEM116-205ENST00000547878 RIMBP3BA6NNM3 1639 aa14.87□□□□□ -0.03
TMEM116-205ENST00000547878 RIMBP3Q9UFD9 1639 aa14.87□□□□□ -0.03
TMEM116-205ENST00000547878 FANCD2Q9BXW9 1451 aa14.86□□□□□ -0.03
TMEM116-205ENST00000547878 WIZO95785 1651 aa14.84□□□□□ -0.03
TMEM116-205ENST00000547878 URB2Q14146 1524 aaKnown RBP14.81□□□□□ -0.04
TMEM116-205ENST00000547878 CFTRP13569 1480 aa14.77□□□□□ -0.05
TMEM116-205ENST00000547878 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
TMEM116-205ENST00000547878 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.06
TMEM116-205ENST00000547878 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
TMEM116-205ENST00000547878 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
TMEM116-205ENST00000547878 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
TMEM116-205ENST00000547878 IFT140Q96RY7 1462 aa14.61□□□□□ -0.07
TMEM116-205ENST00000547878 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
TMEM116-205ENST00000547878 EIF4G3O43432 1585 aaKnown RBP14.57□□□□□ -0.08
TMEM116-205ENST00000547878 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
TMEM116-205ENST00000547878 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
TMEM116-205ENST00000547878 CHD1O14646 1710 aa14.55□□□□□ -0.08
TMEM116-205ENST00000547878 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
TMEM116-205ENST00000547878 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
TMEM116-205ENST00000547878 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.098e-7■■■■■ 28.7
TMEM116-205ENST00000547878 FBLN2P98095 1184 aa14.46□□□□□ -0.09
TMEM116-205ENST00000547878 TARBP1Q13395 1621 aaKnown RBP14.46□□□□□ -0.1
TMEM116-205ENST00000547878 CCDC88BA6NC98 1476 aa14.45□□□□□ -0.1
TMEM116-205ENST00000547878 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
TMEM116-205ENST00000547878 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
TMEM116-205ENST00000547878 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
TMEM116-205ENST00000547878 CLASP1Q7Z460 1538 aa14.37□□□□□ -0.11
TMEM116-205ENST00000547878 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
TMEM116-205ENST00000547878 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
TMEM116-205ENST00000547878 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
TMEM116-205ENST00000547878 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
TMEM116-205ENST00000547878 SOGA1O94964 1423 aa14.28□□□□□ -0.12
TMEM116-205ENST00000547878 SYNJ1O43426 1573 aa14.27□□□□□ -0.12
TMEM116-205ENST00000547878 CHMP7Q8WUX9 453 aaPredicted RBP14.26□□□□□ -0.13
TMEM116-205ENST00000547878 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
TMEM116-205ENST00000547878 MAGI1Q96QZ7 1491 aaPredicted RBP14.22□□□□□ -0.13
TMEM116-205ENST00000547878 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
TMEM116-205ENST00000547878 SYNJ2O15056 1496 aa14.2□□□□□ -0.14
TMEM116-205ENST00000547878 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
TMEM116-205ENST00000547878 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
TMEM116-205ENST00000547878 ERCC6L2Q5T890 1561 aa14.18□□□□□ -0.14
TMEM116-205ENST00000547878 CUX1P39880 1505 aa14.15□□□□□ -0.14
TMEM116-205ENST00000547878 PBRM1Q86U86 1689 aa14.12□□□□□ -0.15
TMEM116-205ENST00000547878 KIF13AQ9H1H9 1805 aa14.07□□□□□ -0.16
TMEM116-205ENST00000547878 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
TMEM116-205ENST00000547878 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
TMEM116-205ENST00000547878 GRIN2AQ12879 1464 aa14.02□□□□□ -0.16
TMEM116-205ENST00000547878 HRCP23327 699 aa14.02□□□□□ -0.16
TMEM116-205ENST00000547878 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
TMEM116-205ENST00000547878 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
TMEM116-205ENST00000547878 NUP160Q12769 1436 aa14□□□□□ -0.17
TMEM116-205ENST00000547878 SHROOM2Q13796 1616 aa13.99□□□□□ -0.17
TMEM116-205ENST00000547878 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
TMEM116-205ENST00000547878 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms