RNA–Protein interactions for RNA: ENST00000622371.1

TMCO3-211, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-211ENST00000622371 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
TMCO3-211ENST00000622371 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
TMCO3-211ENST00000622371 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
TMCO3-211ENST00000622371 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
TMCO3-211ENST00000622371 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
TMCO3-211ENST00000622371 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
TMCO3-211ENST00000622371 ADRA2BP18089 450 aa18.13■□□□□ 0.49
TMCO3-211ENST00000622371 KCNA4P22459 653 aa18.05■□□□□ 0.48
TMCO3-211ENST00000622371 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
TMCO3-211ENST00000622371 FOXD1Q16676 465 aa17.44■□□□□ 0.38
TMCO3-211ENST00000622371 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
TMCO3-211ENST00000622371 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
TMCO3-211ENST00000622371 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
TMCO3-211ENST00000622371 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
TMCO3-211ENST00000622371 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
TMCO3-211ENST00000622371 PIAS4Q8N2W9 510 aaPredicted RBP16.72■□□□□ 0.27
TMCO3-211ENST00000622371 ZBTB22O15209 634 aa16.69■□□□□ 0.26
TMCO3-211ENST00000622371 SLC24A1O60721 1099 aa16.47■□□□□ 0.23
TMCO3-211ENST00000622371 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
TMCO3-211ENST00000622371 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
TMCO3-211ENST00000622371 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
TMCO3-211ENST00000622371 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
TMCO3-211ENST00000622371 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.14
TMCO3-211ENST00000622371 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
TMCO3-211ENST00000622371 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
TMCO3-211ENST00000622371 FKBP8Q14318 412 aa15.69■□□□□ 0.1
TMCO3-211ENST00000622371 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
TMCO3-211ENST00000622371 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
TMCO3-211ENST00000622371 MSH5O43196 834 aa15.44■□□□□ 0.06
TMCO3-211ENST00000622371 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
TMCO3-211ENST00000622371 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
TMCO3-211ENST00000622371 HOXD11P31277 338 aaPredicted RBP15.28■□□□□ 0.04
TMCO3-211ENST00000622371 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
TMCO3-211ENST00000622371 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
TMCO3-211ENST00000622371 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
TMCO3-211ENST00000622371 PRKCSHP14314 528 aaPredicted RBP14.76□□□□□ -0.05
TMCO3-211ENST00000622371 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
TMCO3-211ENST00000622371 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
TMCO3-211ENST00000622371 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
TMCO3-211ENST00000622371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
TMCO3-211ENST00000622371 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
TMCO3-211ENST00000622371 FBXO3Q9UK99 471 aa14.59□□□□□ -0.07
TMCO3-211ENST00000622371 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
TMCO3-211ENST00000622371 BCANQ96GW7 911 aa14.57□□□□□ -0.08
TMCO3-211ENST00000622371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
TMCO3-211ENST00000622371 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
TMCO3-211ENST00000622371 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
TMCO3-211ENST00000622371 TAOK2Q9UL54 1235 aa14.53□□□□□ -0.08
TMCO3-211ENST00000622371 VASPP50552 380 aaPredicted RBP14.52□□□□□ -0.09
TMCO3-211ENST00000622371 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
TMCO3-211ENST00000622371 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
TMCO3-211ENST00000622371 PKD2Q13563 968 aa14.42□□□□□ -0.1
TMCO3-211ENST00000622371 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
TMCO3-211ENST00000622371 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
TMCO3-211ENST00000622371 PROM2Q8N271 834 aa14.36□□□□□ -0.11
TMCO3-211ENST00000622371 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
TMCO3-211ENST00000622371 KDM2AQ9Y2K7 1162 aa14.33□□□□□ -0.11
TMCO3-211ENST00000622371 FBLN2P98095 1184 aa14.31□□□□□ -0.12
TMCO3-211ENST00000622371 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
TMCO3-211ENST00000622371 PAXIP1Q6ZW49 1069 aaPredicted RBP14.19□□□□□ -0.14
TMCO3-211ENST00000622371 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
TMCO3-211ENST00000622371 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
TMCO3-211ENST00000622371 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
TMCO3-211ENST00000622371 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
TMCO3-211ENST00000622371 APLP2Q06481 763 aa14.03□□□□□ -0.16
TMCO3-211ENST00000622371 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
TMCO3-211ENST00000622371 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
TMCO3-211ENST00000622371 RGL2O15211 777 aa13.99□□□□□ -0.17
TMCO3-211ENST00000622371 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
TMCO3-211ENST00000622371 POLA2Q14181 598 aa13.99□□□□□ -0.17
TMCO3-211ENST00000622371 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
TMCO3-211ENST00000622371 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
TMCO3-211ENST00000622371 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
TMCO3-211ENST00000622371 TIMELESSQ9UNS1 1208 aa13.86□□□□□ -0.19
TMCO3-211ENST00000622371 CHGAP10645 457 aaKnown RBP13.81□□□□□ -0.2
TMCO3-211ENST00000622371 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
TMCO3-211ENST00000622371 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.2
TMCO3-211ENST00000622371 NBR1Q14596 966 aa13.76□□□□□ -0.21
TMCO3-211ENST00000622371 CAPN15O75808 1086 aa13.74□□□□□ -0.21
TMCO3-211ENST00000622371 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
TMCO3-211ENST00000622371 ABCB7O75027 752 aa13.68□□□□□ -0.22
TMCO3-211ENST00000622371 MIER1Q8N108 512 aa13.67□□□□□ -0.22
TMCO3-211ENST00000622371 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
TMCO3-211ENST00000622371 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
TMCO3-211ENST00000622371 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
TMCO3-211ENST00000622371 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
TMCO3-211ENST00000622371 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
TMCO3-211ENST00000622371 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
TMCO3-211ENST00000622371 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.24
TMCO3-211ENST00000622371 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
TMCO3-211ENST00000622371 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
TMCO3-211ENST00000622371 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
TMCO3-211ENST00000622371 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
TMCO3-211ENST00000622371 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
TMCO3-211ENST00000622371 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.27
TMCO3-211ENST00000622371 SPDYE6P0CI01 402 aa13.4□□□□□ -0.27
TMCO3-211ENST00000622371 SPDYE2Q495Y8 402 aa13.4□□□□□ -0.27
TMCO3-211ENST00000622371 ARXQ96QS3 562 aa13.39□□□□□ -0.27
TMCO3-211ENST00000622371 GTPBP6O43824 516 aaPredicted RBP13.38□□□□□ -0.27
TMCO3-211ENST00000622371 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms