RNA–Protein interactions for RNA: ENST00000355445.7

TMEM116-201, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-201ENST00000355445 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
TMEM116-201ENST00000355445 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
TMEM116-201ENST00000355445 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
TMEM116-201ENST00000355445 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
TMEM116-201ENST00000355445 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
TMEM116-201ENST00000355445 ABCC9O60706 1549 aa18.14■□□□□ 0.49
TMEM116-201ENST00000355445 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
TMEM116-201ENST00000355445 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
TMEM116-201ENST00000355445 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
TMEM116-201ENST00000355445 NACADO15069 1562 aa17.06■□□□□ 0.32
TMEM116-201ENST00000355445 FOXD1Q16676 465 aa16.96■□□□□ 0.31
TMEM116-201ENST00000355445 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
TMEM116-201ENST00000355445 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
TMEM116-201ENST00000355445 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
TMEM116-201ENST00000355445 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
TMEM116-201ENST00000355445 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
TMEM116-201ENST00000355445 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
TMEM116-201ENST00000355445 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.25
TMEM116-201ENST00000355445 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
TMEM116-201ENST00000355445 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
TMEM116-201ENST00000355445 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
TMEM116-201ENST00000355445 CC2D2AQ9P2K1 1620 aa16.39■□□□□ 0.21
TMEM116-201ENST00000355445 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
TMEM116-201ENST00000355445 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.21
TMEM116-201ENST00000355445 ADRA2BP18089 450 aa16.11■□□□□ 0.17
TMEM116-201ENST00000355445 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
TMEM116-201ENST00000355445 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
TMEM116-201ENST00000355445 MSH5O43196 834 aa15.89■□□□□ 0.13
TMEM116-201ENST00000355445 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.11
TMEM116-201ENST00000355445 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
TMEM116-201ENST00000355445 CUX2O14529 1486 aa15.68■□□□□ 0.1
TMEM116-201ENST00000355445 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
TMEM116-201ENST00000355445 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
TMEM116-201ENST00000355445 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
TMEM116-201ENST00000355445 HMGXB3Q12766 1538 aa15.64■□□□□ 0.09
TMEM116-201ENST00000355445 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
TMEM116-201ENST00000355445 NESP48681 1621 aa15.56■□□□□ 0.08
TMEM116-201ENST00000355445 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
TMEM116-201ENST00000355445 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
TMEM116-201ENST00000355445 PEG3Q9GZU2 1588 aa15.51■□□□□ 0.07
TMEM116-201ENST00000355445 THOC2Q8NI27 1593 aaKnown RBP15.46■□□□□ 0.07
TMEM116-201ENST00000355445 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
TMEM116-201ENST00000355445 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
TMEM116-201ENST00000355445 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
TMEM116-201ENST00000355445 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
TMEM116-201ENST00000355445 WIZO95785 1651 aa15.25■□□□□ 0.03
TMEM116-201ENST00000355445 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
TMEM116-201ENST00000355445 MRC2Q9UBG0 1479 aa15.21■□□□□ 0.03
TMEM116-201ENST00000355445 WDR62O43379 1518 aa15.2■□□□□ 0.02
TMEM116-201ENST00000355445 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
TMEM116-201ENST00000355445 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
TMEM116-201ENST00000355445 CFTRP13569 1480 aa15.06■□□□□ 0
TMEM116-201ENST00000355445 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
TMEM116-201ENST00000355445 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
TMEM116-201ENST00000355445 TRIM41Q8WV44 630 aa15.03■□□□□ -0
TMEM116-201ENST00000355445 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
TMEM116-201ENST00000355445 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
TMEM116-201ENST00000355445 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
TMEM116-201ENST00000355445 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
TMEM116-201ENST00000355445 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
TMEM116-201ENST00000355445 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
TMEM116-201ENST00000355445 IFT140Q96RY7 1462 aa14.81□□□□□ -0.04
TMEM116-201ENST00000355445 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
TMEM116-201ENST00000355445 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
TMEM116-201ENST00000355445 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
TMEM116-201ENST00000355445 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
TMEM116-201ENST00000355445 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
TMEM116-201ENST00000355445 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.05
TMEM116-201ENST00000355445 DNMBPQ6XZF7 1577 aa14.75□□□□□ -0.05
TMEM116-201ENST00000355445 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
TMEM116-201ENST00000355445 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
TMEM116-201ENST00000355445 ABCC8Q09428 1581 aa14.72□□□□□ -0.05
TMEM116-201ENST00000355445 TARBP1Q13395 1621 aaKnown RBP14.7□□□□□ -0.06
TMEM116-201ENST00000355445 CHD1O14646 1710 aa14.68□□□□□ -0.06
TMEM116-201ENST00000355445 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
TMEM116-201ENST00000355445 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.068e-7■■■■■ 28.7
TMEM116-201ENST00000355445 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
TMEM116-201ENST00000355445 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
TMEM116-201ENST00000355445 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
TMEM116-201ENST00000355445 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
TMEM116-201ENST00000355445 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
TMEM116-201ENST00000355445 FGD5Q6ZNL6 1462 aa14.54□□□□□ -0.08
TMEM116-201ENST00000355445 FBLN2P98095 1184 aa14.53□□□□□ -0.08
TMEM116-201ENST00000355445 SOGA1O94964 1423 aa14.53□□□□□ -0.08
TMEM116-201ENST00000355445 TDRD9Q8NDG6 1382 aaKnown RBP14.53□□□□□ -0.08
TMEM116-201ENST00000355445 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
TMEM116-201ENST00000355445 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
TMEM116-201ENST00000355445 CUX1P39880 1505 aa14.51□□□□□ -0.09
TMEM116-201ENST00000355445 CLASP1Q7Z460 1538 aa14.5□□□□□ -0.09
TMEM116-201ENST00000355445 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
TMEM116-201ENST00000355445 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
TMEM116-201ENST00000355445 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
TMEM116-201ENST00000355445 SYNJ1O43426 1573 aa14.46□□□□□ -0.1
TMEM116-201ENST00000355445 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
TMEM116-201ENST00000355445 PBRM1Q86U86 1689 aa14.43□□□□□ -0.1
TMEM116-201ENST00000355445 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
TMEM116-201ENST00000355445 SYNJ2O15056 1496 aa14.42□□□□□ -0.1
TMEM116-201ENST00000355445 CHMP7Q8WUX9 453 aaPredicted RBP14.4□□□□□ -0.1
TMEM116-201ENST00000355445 ABCA5Q8WWZ7 1642 aa14.38□□□□□ -0.11
TMEM116-201ENST00000355445 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms