RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
TMEM116-215ENST00000552374 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
TMEM116-215ENST00000552374 ABCC9O60706 1549 aa23.49■■□□□ 1.35
TMEM116-215ENST00000552374 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
TMEM116-215ENST00000552374 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
TMEM116-215ENST00000552374 NACADO15069 1562 aa22.29■■□□□ 1.16
TMEM116-215ENST00000552374 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
TMEM116-215ENST00000552374 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
TMEM116-215ENST00000552374 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
TMEM116-215ENST00000552374 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.09
TMEM116-215ENST00000552374 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
TMEM116-215ENST00000552374 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
TMEM116-215ENST00000552374 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
TMEM116-215ENST00000552374 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
TMEM116-215ENST00000552374 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
TMEM116-215ENST00000552374 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
TMEM116-215ENST00000552374 CC2D2AQ9P2K1 1620 aa21.14■□□□□ 0.97
TMEM116-215ENST00000552374 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
TMEM116-215ENST00000552374 NCAPD3P42695 1498 aa20.64■□□□□ 0.9
TMEM116-215ENST00000552374 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
TMEM116-215ENST00000552374 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
TMEM116-215ENST00000552374 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
TMEM116-215ENST00000552374 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
TMEM116-215ENST00000552374 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
TMEM116-215ENST00000552374 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
TMEM116-215ENST00000552374 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
TMEM116-215ENST00000552374 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
TMEM116-215ENST00000552374 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
TMEM116-215ENST00000552374 NESP48681 1621 aa20.24■□□□□ 0.83
TMEM116-215ENST00000552374 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
TMEM116-215ENST00000552374 WIZO95785 1651 aa20.22■□□□□ 0.83
TMEM116-215ENST00000552374 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
TMEM116-215ENST00000552374 LAMC3Q9Y6N6 1575 aa20.05■□□□□ 0.8
TMEM116-215ENST00000552374 PDS5BQ9NTI5 1447 aa20.05■□□□□ 0.8
TMEM116-215ENST00000552374 CUX2O14529 1486 aa20.03■□□□□ 0.8
TMEM116-215ENST00000552374 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
TMEM116-215ENST00000552374 CFTRP13569 1480 aa19.86■□□□□ 0.77
TMEM116-215ENST00000552374 KIF21AQ7Z4S6 1674 aa19.85■□□□□ 0.77
TMEM116-215ENST00000552374 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
TMEM116-215ENST00000552374 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.77
TMEM116-215ENST00000552374 FANCD2Q9BXW9 1451 aa19.82■□□□□ 0.76
TMEM116-215ENST00000552374 DNAJC5Q9H3Z4 198 aa19.82■□□□□ 0.76
TMEM116-215ENST00000552374 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
TMEM116-215ENST00000552374 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
TMEM116-215ENST00000552374 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
TMEM116-215ENST00000552374 WDR62O43379 1518 aa19.67■□□□□ 0.74
TMEM116-215ENST00000552374 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
TMEM116-215ENST00000552374 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
TMEM116-215ENST00000552374 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
TMEM116-215ENST00000552374 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
TMEM116-215ENST00000552374 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
TMEM116-215ENST00000552374 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
TMEM116-215ENST00000552374 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
TMEM116-215ENST00000552374 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
TMEM116-215ENST00000552374 SOGA1O94964 1423 aa19.29■□□□□ 0.68
TMEM116-215ENST00000552374 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.688e-7■■■■■ 28.7
TMEM116-215ENST00000552374 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.68
TMEM116-215ENST00000552374 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.67
TMEM116-215ENST00000552374 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
TMEM116-215ENST00000552374 CUX1P39880 1505 aa19.23■□□□□ 0.67
TMEM116-215ENST00000552374 FBLN2P98095 1184 aa19.21■□□□□ 0.67
TMEM116-215ENST00000552374 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
TMEM116-215ENST00000552374 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
TMEM116-215ENST00000552374 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
TMEM116-215ENST00000552374 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.66
TMEM116-215ENST00000552374 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
TMEM116-215ENST00000552374 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
TMEM116-215ENST00000552374 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.64
TMEM116-215ENST00000552374 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
TMEM116-215ENST00000552374 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
TMEM116-215ENST00000552374 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
TMEM116-215ENST00000552374 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
TMEM116-215ENST00000552374 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
TMEM116-215ENST00000552374 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
TMEM116-215ENST00000552374 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
TMEM116-215ENST00000552374 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
TMEM116-215ENST00000552374 CHD1O14646 1710 aa18.91■□□□□ 0.62
TMEM116-215ENST00000552374 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
TMEM116-215ENST00000552374 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
TMEM116-215ENST00000552374 ARHGEF11O15085 1522 aa18.87■□□□□ 0.61
TMEM116-215ENST00000552374 RIMBP3CA6NJZ7 1639 aa18.86■□□□□ 0.61
TMEM116-215ENST00000552374 RIMBP3BA6NNM3 1639 aa18.86■□□□□ 0.61
TMEM116-215ENST00000552374 RIMBP3Q9UFD9 1639 aa18.86■□□□□ 0.61
TMEM116-215ENST00000552374 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
TMEM116-215ENST00000552374 PBRM1Q86U86 1689 aa18.8■□□□□ 0.6
TMEM116-215ENST00000552374 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
TMEM116-215ENST00000552374 GRIN2AQ12879 1464 aa18.75■□□□□ 0.59
TMEM116-215ENST00000552374 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
TMEM116-215ENST00000552374 ERICH3Q5RHP9 1530 aa18.73■□□□□ 0.59
TMEM116-215ENST00000552374 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
TMEM116-215ENST00000552374 IGF1RP08069 1367 aa18.71■□□□□ 0.59
TMEM116-215ENST00000552374 KIF27Q86VH2 1401 aa18.7■□□□□ 0.58
TMEM116-215ENST00000552374 ADAMTS12P58397 1594 aa18.69■□□□□ 0.58
TMEM116-215ENST00000552374 NUP160Q12769 1436 aa18.67■□□□□ 0.58
TMEM116-215ENST00000552374 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
TMEM116-215ENST00000552374 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
TMEM116-215ENST00000552374 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
TMEM116-215ENST00000552374 CARMIL1Q5VZK9 1371 aa18.58■□□□□ 0.57
TMEM116-215ENST00000552374 PRG4Q92954 1404 aaPredicted RBP18.54■□□□□ 0.56
TMEM116-215ENST00000552374 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms