RNA–Protein interactions for RNA: ENST00000354532.7

ARHGEF1-203, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-203ENST00000354532 NISCHQ9Y2I1 1504 aa26.52■■□□□ 1.84
ARHGEF1-203ENST00000354532 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
ARHGEF1-203ENST00000354532 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
ARHGEF1-203ENST00000354532 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
ARHGEF1-203ENST00000354532 ZCCHC6Q5VYS8 1495 aaKnown RBP22.24■■□□□ 1.15
ARHGEF1-203ENST00000354532 SUPT5HO00267 1087 aaKnown RBP22.18■■□□□ 1.14
ARHGEF1-203ENST00000354532 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
ARHGEF1-203ENST00000354532 HRCP23327 699 aa22■■□□□ 1.11
ARHGEF1-203ENST00000354532 ABCC9O60706 1549 aa21.99■■□□□ 1.11
ARHGEF1-203ENST00000354532 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
ARHGEF1-203ENST00000354532 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
ARHGEF1-203ENST00000354532 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
ARHGEF1-203ENST00000354532 PPARGC1BQ86YN6 1023 aaKnown RBP21.58■■□□□ 1.04
ARHGEF1-203ENST00000354532 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
ARHGEF1-203ENST00000354532 NACADO15069 1562 aa21.27■■□□□ 1
ARHGEF1-203ENST00000354532 LOC105371045A0A1W2PR82 267 aa21.27■□□□□ 0.99
ARHGEF1-203ENST00000354532 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
ARHGEF1-203ENST00000354532 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
ARHGEF1-203ENST00000354532 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.959e-7■■■□□ 16.5
ARHGEF1-203ENST00000354532 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.92
ARHGEF1-203ENST00000354532 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF1-203ENST00000354532 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
ARHGEF1-203ENST00000354532 UNC13AQ9UPW8 1703 aa20.69■□□□□ 0.9
ARHGEF1-203ENST00000354532 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
ARHGEF1-203ENST00000354532 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
ARHGEF1-203ENST00000354532 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
ARHGEF1-203ENST00000354532 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
ARHGEF1-203ENST00000354532 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.88
ARHGEF1-203ENST00000354532 FAM9AQ8IZU1 332 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF1-203ENST00000354532 WIZO95785 1651 aa20.47■□□□□ 0.87
ARHGEF1-203ENST00000354532 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF1-203ENST00000354532 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
ARHGEF1-203ENST00000354532 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
ARHGEF1-203ENST00000354532 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-203ENST00000354532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-203ENST00000354532 NEUROD1Q13562 356 aa20.19■□□□□ 0.82
ARHGEF1-203ENST00000354532 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.81
ARHGEF1-203ENST00000354532 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-203ENST00000354532 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
ARHGEF1-203ENST00000354532 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
ARHGEF1-203ENST00000354532 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
ARHGEF1-203ENST00000354532 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
ARHGEF1-203ENST00000354532 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
ARHGEF1-203ENST00000354532 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
ARHGEF1-203ENST00000354532 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
ARHGEF1-203ENST00000354532 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
ARHGEF1-203ENST00000354532 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
ARHGEF1-203ENST00000354532 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
ARHGEF1-203ENST00000354532 ABCC8Q09428 1581 aa19.82■□□□□ 0.76
ARHGEF1-203ENST00000354532 TTBK1Q5TCY1 1321 aaPredicted RBP19.82■□□□□ 0.76
ARHGEF1-203ENST00000354532 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
ARHGEF1-203ENST00000354532 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
ARHGEF1-203ENST00000354532 SOGA1O94964 1423 aa19.71■□□□□ 0.75
ARHGEF1-203ENST00000354532 ZNF316A6NFI3 1004 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF1-203ENST00000354532 TNIKQ9UKE5 1360 aa19.69■□□□□ 0.74
ARHGEF1-203ENST00000354532 CC2D2AQ9P2K1 1620 aa19.66■□□□□ 0.74
ARHGEF1-203ENST00000354532 MYT1Q01538 1121 aa19.65■□□□□ 0.74
ARHGEF1-203ENST00000354532 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
ARHGEF1-203ENST00000354532 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
ARHGEF1-203ENST00000354532 YTHDC1Q96MU7 727 aaKnown RBP19.6■□□□□ 0.73
ARHGEF1-203ENST00000354532 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
ARHGEF1-203ENST00000354532 MIER1Q8N108 512 aa19.58■□□□□ 0.72
ARHGEF1-203ENST00000354532 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
ARHGEF1-203ENST00000354532 EEA1Q15075 1411 aa19.52■□□□□ 0.72
ARHGEF1-203ENST00000354532 UBTFP17480 764 aaKnown RBP19.49■□□□□ 0.71
ARHGEF1-203ENST00000354532 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
ARHGEF1-203ENST00000354532 SYNJ1O43426 1573 aa19.42■□□□□ 0.7
ARHGEF1-203ENST00000354532 HNRNPUL2Q1KMD3 747 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-203ENST00000354532 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
ARHGEF1-203ENST00000354532 CFTRP13569 1480 aa19.38■□□□□ 0.69
ARHGEF1-203ENST00000354532 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF1-203ENST00000354532 KIF21BO75037 1637 aa19.33■□□□□ 0.69
ARHGEF1-203ENST00000354532 NESP48681 1621 aa19.33■□□□□ 0.69
ARHGEF1-203ENST00000354532 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
ARHGEF1-203ENST00000354532 CLIP1P30622 1438 aa19.3■□□□□ 0.68
ARHGEF1-203ENST00000354532 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
ARHGEF1-203ENST00000354532 CUX1P39880 1505 aa19.23■□□□□ 0.67
ARHGEF1-203ENST00000354532 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
ARHGEF1-203ENST00000354532 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
ARHGEF1-203ENST00000354532 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
ARHGEF1-203ENST00000354532 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
ARHGEF1-203ENST00000354532 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
ARHGEF1-203ENST00000354532 CLSPNQ9HAW4 1339 aa19.09■□□□□ 0.65
ARHGEF1-203ENST00000354532 APLP2Q06481 763 aa19.08■□□□□ 0.64
ARHGEF1-203ENST00000354532 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
ARHGEF1-203ENST00000354532 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
ARHGEF1-203ENST00000354532 CUX2O14529 1486 aa19.04■□□□□ 0.64
ARHGEF1-203ENST00000354532 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
ARHGEF1-203ENST00000354532 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
ARHGEF1-203ENST00000354532 PRDM2Q13029 1718 aa19■□□□□ 0.63
ARHGEF1-203ENST00000354532 ARAP1Q96P48 1450 aa19■□□□□ 0.63
ARHGEF1-203ENST00000354532 TSHZ2Q9NRE2 1034 aa19■□□□□ 0.63
ARHGEF1-203ENST00000354532 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
ARHGEF1-203ENST00000354532 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
ARHGEF1-203ENST00000354532 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
ARHGEF1-203ENST00000354532 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
ARHGEF1-203ENST00000354532 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
ARHGEF1-203ENST00000354532 URB2Q14146 1524 aaKnown RBP18.91■□□□□ 0.62
ARHGEF1-203ENST00000354532 KCNH8Q96L42 1107 aa18.91■□□□□ 0.62
ARHGEF1-203ENST00000354532 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms