RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
ARHGEF1-219ENST00000599846 SHROOM4Q9ULL8 1493 aa27.84■■■□□ 2.05
ARHGEF1-219ENST00000599846 SUPT5HO00267 1087 aaKnown RBP27.51■■□□□ 1.99
ARHGEF1-219ENST00000599846 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
ARHGEF1-219ENST00000599846 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
ARHGEF1-219ENST00000599846 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
ARHGEF1-219ENST00000599846 CCDC180Q9P1Z9 1646 aa26.18■■□□□ 1.78
ARHGEF1-219ENST00000599846 PCGF6Q9BYE7 350 aa26.13■■□□□ 1.77
ARHGEF1-219ENST00000599846 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
ARHGEF1-219ENST00000599846 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
ARHGEF1-219ENST00000599846 HRCP23327 699 aa25.87■■□□□ 1.73
ARHGEF1-219ENST00000599846 EHMT2Q96KQ7 1210 aa25.64■■□□□ 1.7
ARHGEF1-219ENST00000599846 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.69
ARHGEF1-219ENST00000599846 FAM9AQ8IZU1 332 aaPredicted RBP25.56■■□□□ 1.68
ARHGEF1-219ENST00000599846 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
ARHGEF1-219ENST00000599846 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
ARHGEF1-219ENST00000599846 TRIM26Q12899 539 aaPredicted RBP25.27■■□□□ 1.64
ARHGEF1-219ENST00000599846 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
ARHGEF1-219ENST00000599846 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
ARHGEF1-219ENST00000599846 ABCC9O60706 1549 aa25.02■■□□□ 1.6
ARHGEF1-219ENST00000599846 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
ARHGEF1-219ENST00000599846 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
ARHGEF1-219ENST00000599846 ZEB1P37275 1124 aaPredicted RBP24.76■■□□□ 1.55
ARHGEF1-219ENST00000599846 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
ARHGEF1-219ENST00000599846 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
ARHGEF1-219ENST00000599846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.52■■□□□ 1.52
ARHGEF1-219ENST00000599846 CCER1Q8TC90 406 aaPredicted RBP24.52■■□□□ 1.52
ARHGEF1-219ENST00000599846 NACADO15069 1562 aa24.43■■□□□ 1.5
ARHGEF1-219ENST00000599846 WIZO95785 1651 aa24.38■■□□□ 1.49
ARHGEF1-219ENST00000599846 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
ARHGEF1-219ENST00000599846 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.489e-7■■■□□ 16.5
ARHGEF1-219ENST00000599846 RANGAP1P46060 587 aaPredicted RBP24.19■■□□□ 1.46
ARHGEF1-219ENST00000599846 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
ARHGEF1-219ENST00000599846 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
ARHGEF1-219ENST00000599846 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
ARHGEF1-219ENST00000599846 CSRNP3Q8WYN3 585 aa24.05■■□□□ 1.44
ARHGEF1-219ENST00000599846 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
ARHGEF1-219ENST00000599846 SOGA1O94964 1423 aa24.01■■□□□ 1.43
ARHGEF1-219ENST00000599846 DIEXFQ68CQ4 756 aaKnown RBP23.97■■□□□ 1.43
ARHGEF1-219ENST00000599846 HNRNPUL2Q1KMD3 747 aaKnown RBP23.96■■□□□ 1.43
ARHGEF1-219ENST00000599846 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
ARHGEF1-219ENST00000599846 APLP2Q06481 763 aa23.91■■□□□ 1.42
ARHGEF1-219ENST00000599846 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
ARHGEF1-219ENST00000599846 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
ARHGEF1-219ENST00000599846 YTHDC1Q96MU7 727 aaKnown RBP23.81■■□□□ 1.4
ARHGEF1-219ENST00000599846 SMARCA4P51532 1647 aa23.8■■□□□ 1.4
ARHGEF1-219ENST00000599846 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
ARHGEF1-219ENST00000599846 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
ARHGEF1-219ENST00000599846 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
ARHGEF1-219ENST00000599846 ACIN1Q9UKV3 1341 aaKnown RBP23.75■■□□□ 1.39
ARHGEF1-219ENST00000599846 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
ARHGEF1-219ENST00000599846 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
ARHGEF1-219ENST00000599846 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
ARHGEF1-219ENST00000599846 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
ARHGEF1-219ENST00000599846 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
ARHGEF1-219ENST00000599846 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
ARHGEF1-219ENST00000599846 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
ARHGEF1-219ENST00000599846 EEA1Q15075 1411 aa23.62■■□□□ 1.37
ARHGEF1-219ENST00000599846 CLIP1P30622 1438 aa23.54■■□□□ 1.36
ARHGEF1-219ENST00000599846 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
ARHGEF1-219ENST00000599846 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
ARHGEF1-219ENST00000599846 ITGAEP38570 1179 aa23.43■■□□□ 1.34
ARHGEF1-219ENST00000599846 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
ARHGEF1-219ENST00000599846 MIER1Q8N108 512 aa23.4■■□□□ 1.34
ARHGEF1-219ENST00000599846 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.33
ARHGEF1-219ENST00000599846 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
ARHGEF1-219ENST00000599846 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
ARHGEF1-219ENST00000599846 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
ARHGEF1-219ENST00000599846 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
ARHGEF1-219ENST00000599846 ATP1B4Q9UN42 357 aaPredicted RBP23.24■■□□□ 1.31
ARHGEF1-219ENST00000599846 KANK4Q5T7N3 995 aaPredicted RBP23.19■■□□□ 1.3
ARHGEF1-219ENST00000599846 KIF21BO75037 1637 aa23.09■■□□□ 1.29
ARHGEF1-219ENST00000599846 P3H3Q8IVL6 736 aa23.04■■□□□ 1.28
ARHGEF1-219ENST00000599846 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
ARHGEF1-219ENST00000599846 FAM50AQ14320 339 aaKnown RBP22.98■■□□□ 1.27
ARHGEF1-219ENST00000599846 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
ARHGEF1-219ENST00000599846 DHX57Q6P158 1386 aaKnown RBP22.92■■□□□ 1.26
ARHGEF1-219ENST00000599846 TOP2BQ02880 1626 aa22.89■■□□□ 1.26
ARHGEF1-219ENST00000599846 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
ARHGEF1-219ENST00000599846 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
ARHGEF1-219ENST00000599846 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
ARHGEF1-219ENST00000599846 CLSPNQ9HAW4 1339 aa22.81■■□□□ 1.24
ARHGEF1-219ENST00000599846 CUX2O14529 1486 aa22.79■■□□□ 1.24
ARHGEF1-219ENST00000599846 CUX1P39880 1505 aa22.78■■□□□ 1.24
ARHGEF1-219ENST00000599846 HIRIP3Q9BW71 556 aaPredicted RBP22.75■■□□□ 1.23
ARHGEF1-219ENST00000599846 SIN3AQ96ST3 1273 aa22.74■■□□□ 1.23
ARHGEF1-219ENST00000599846 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
ARHGEF1-219ENST00000599846 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
ARHGEF1-219ENST00000599846 DDX10Q13206 875 aaKnown RBP22.72■■□□□ 1.23
ARHGEF1-219ENST00000599846 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
ARHGEF1-219ENST00000599846 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
ARHGEF1-219ENST00000599846 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
ARHGEF1-219ENST00000599846 KCNH8Q96L42 1107 aa22.67■■□□□ 1.22
ARHGEF1-219ENST00000599846 IGF1RP08069 1367 aa22.66■■□□□ 1.22
ARHGEF1-219ENST00000599846 BCANQ96GW7 911 aa22.66■■□□□ 1.22
ARHGEF1-219ENST00000599846 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
ARHGEF1-219ENST00000599846 CFTRP13569 1480 aa22.63■■□□□ 1.21
ARHGEF1-219ENST00000599846 RRBP1Q9P2E9 1410 aaKnown RBP22.63■■□□□ 1.21
ARHGEF1-219ENST00000599846 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
ARHGEF1-219ENST00000599846 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms