RNA–Protein interactions for RNA: ENST00000373797.1

EPB41-205, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-205ENST00000373797 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
EPB41-205ENST00000373797 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
EPB41-205ENST00000373797 ZCCHC6Q5VYS8 1495 aaKnown RBP30.35■■■□□ 2.45
EPB41-205ENST00000373797 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
EPB41-205ENST00000373797 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
EPB41-205ENST00000373797 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
EPB41-205ENST00000373797 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
EPB41-205ENST00000373797 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
EPB41-205ENST00000373797 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
EPB41-205ENST00000373797 SCRIBQ14160 1630 aa28.62■■■□□ 2.17
EPB41-205ENST00000373797 ABCC9O60706 1549 aa28.57■■■□□ 2.16
EPB41-205ENST00000373797 NACADO15069 1562 aa28.41■■■□□ 2.14
EPB41-205ENST00000373797 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
EPB41-205ENST00000373797 CECR2Q9BXF3 1484 aa28■■■□□ 2.07
EPB41-205ENST00000373797 RB1CC1Q8TDY2 1594 aa27.98■■■□□ 2.07
EPB41-205ENST00000373797 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
EPB41-205ENST00000373797 LOC105371045A0A1W2PR82 267 aa27.86■■■□□ 2.05
EPB41-205ENST00000373797 WIZO95785 1651 aa27.73■■■□□ 2.03
EPB41-205ENST00000373797 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
EPB41-205ENST00000373797 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
EPB41-205ENST00000373797 UNC13AQ9UPW8 1703 aa27.59■■■□□ 2.01
EPB41-205ENST00000373797 PCGF6Q9BYE7 350 aa27.55■■■□□ 2
EPB41-205ENST00000373797 HRCP23327 699 aa27.44■■□□□ 1.98
EPB41-205ENST00000373797 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
EPB41-205ENST00000373797 FAM9AQ8IZU1 332 aaPredicted RBP27.32■■□□□ 1.96
EPB41-205ENST00000373797 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
EPB41-205ENST00000373797 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
EPB41-205ENST00000373797 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
EPB41-205ENST00000373797 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.94
EPB41-205ENST00000373797 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
EPB41-205ENST00000373797 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
EPB41-205ENST00000373797 TRIM26Q12899 539 aaPredicted RBP27.14■■□□□ 1.94
EPB41-205ENST00000373797 EHMT2Q96KQ7 1210 aa27.03■■□□□ 1.92
EPB41-205ENST00000373797 ABCC8Q09428 1581 aa26.99■■□□□ 1.91
EPB41-205ENST00000373797 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
EPB41-205ENST00000373797 PPARGC1BQ86YN6 1023 aaKnown RBP26.86■■□□□ 1.89
EPB41-205ENST00000373797 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
EPB41-205ENST00000373797 SOGA1O94964 1423 aa26.7■■□□□ 1.86
EPB41-205ENST00000373797 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
EPB41-205ENST00000373797 RUSC2Q8N2Y8 1516 aa26.59■■□□□ 1.85
EPB41-205ENST00000373797 WRNQ14191 1432 aaPredicted RBP eCLIP26.58■■□□□ 1.85
EPB41-205ENST00000373797 EEA1Q15075 1411 aa26.56■■□□□ 1.84
EPB41-205ENST00000373797 CSRNP3Q8WYN3 585 aa26.53■■□□□ 1.84
EPB41-205ENST00000373797 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
EPB41-205ENST00000373797 TNIKQ9UKE5 1360 aa26.47■■□□□ 1.83
EPB41-205ENST00000373797 CEP162Q5TB80 1403 aa26.46■■□□□ 1.83
EPB41-205ENST00000373797 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
EPB41-205ENST00000373797 GOLGA3Q08378 1498 aa26.34■■□□□ 1.81
EPB41-205ENST00000373797 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
EPB41-205ENST00000373797 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
EPB41-205ENST00000373797 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
EPB41-205ENST00000373797 KIF21BO75037 1637 aa26.22■■□□□ 1.79
EPB41-205ENST00000373797 CEP164Q9UPV0 1460 aa26.22■■□□□ 1.79
EPB41-205ENST00000373797 TOP2BQ02880 1626 aa26.2■■□□□ 1.79
EPB41-205ENST00000373797 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
EPB41-205ENST00000373797 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
EPB41-205ENST00000373797 RAPGEF2Q9Y4G8 1499 aa26.06■■□□□ 1.76
EPB41-205ENST00000373797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.06■■□□□ 1.76
EPB41-205ENST00000373797 CFTRP13569 1480 aa26.01■■□□□ 1.75
EPB41-205ENST00000373797 CLIP1P30622 1438 aa26.01■■□□□ 1.75
EPB41-205ENST00000373797 CUX1P39880 1505 aa25.98■■□□□ 1.75
EPB41-205ENST00000373797 CCER1Q8TC90 406 aaPredicted RBP25.96■■□□□ 1.75
EPB41-205ENST00000373797 VPS8Q8N3P4 1428 aa25.89■■□□□ 1.74
EPB41-205ENST00000373797 PRXQ9BXM0 1461 aa25.89■■□□□ 1.73
EPB41-205ENST00000373797 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
EPB41-205ENST00000373797 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
EPB41-205ENST00000373797 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
EPB41-205ENST00000373797 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
EPB41-205ENST00000373797 CADPSQ9ULU8 1353 aa25.74■■□□□ 1.71
EPB41-205ENST00000373797 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
EPB41-205ENST00000373797 APLP2Q06481 763 aa25.67■■□□□ 1.7
EPB41-205ENST00000373797 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
EPB41-205ENST00000373797 HNRNPUL2Q1KMD3 747 aaKnown RBP25.59■■□□□ 1.69
EPB41-205ENST00000373797 CUX2O14529 1486 aa25.56■■□□□ 1.68
EPB41-205ENST00000373797 IGF1RP08069 1367 aa25.56■■□□□ 1.68
EPB41-205ENST00000373797 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
EPB41-205ENST00000373797 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
EPB41-205ENST00000373797 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
EPB41-205ENST00000373797 KANK4Q5T7N3 995 aaPredicted RBP25.46■■□□□ 1.67
EPB41-205ENST00000373797 CARMIL1Q5VZK9 1371 aa25.41■■□□□ 1.66
EPB41-205ENST00000373797 NESP48681 1621 aa25.35■■□□□ 1.65
EPB41-205ENST00000373797 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
EPB41-205ENST00000373797 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
EPB41-205ENST00000373797 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
EPB41-205ENST00000373797 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
EPB41-205ENST00000373797 RRBP1Q9P2E9 1410 aaKnown RBP25.28■■□□□ 1.64
EPB41-205ENST00000373797 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
EPB41-205ENST00000373797 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
EPB41-205ENST00000373797 ZNF316A6NFI3 1004 aaPredicted RBP25.25■■□□□ 1.63
EPB41-205ENST00000373797 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
EPB41-205ENST00000373797 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
EPB41-205ENST00000373797 TIAM1Q13009 1591 aa25.16■■□□□ 1.62
EPB41-205ENST00000373797 CCNB3Q8WWL7 1395 aa25.15■■□□□ 1.62
EPB41-205ENST00000373797 DHX57Q6P158 1386 aaKnown RBP25.15■■□□□ 1.62
EPB41-205ENST00000373797 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.61
EPB41-205ENST00000373797 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
EPB41-205ENST00000373797 CLSPNQ9HAW4 1339 aa25.1■■□□□ 1.61
EPB41-205ENST00000373797 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
EPB41-205ENST00000373797 CUL7Q14999 1698 aa25.09■■□□□ 1.61
EPB41-205ENST00000373797 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms