RNA–Protein interactions for RNA: ENST00000537058.5

CADM1-206, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CADM1, Length 3,550 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-206ENST00000537058 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
CADM1-206ENST00000537058 HRCP23327 699 aa21.36■■□□□ 1.01
CADM1-206ENST00000537058 PPARGC1BQ86YN6 1023 aaKnown RBP21.18■□□□□ 0.98
CADM1-206ENST00000537058 PCGF6Q9BYE7 350 aa21.1■□□□□ 0.97
CADM1-206ENST00000537058 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
CADM1-206ENST00000537058 SHROOM4Q9ULL8 1493 aa20.95■□□□□ 0.94
CADM1-206ENST00000537058 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
CADM1-206ENST00000537058 MYO15BQ96JP2 1530 aa20.5■□□□□ 0.87
CADM1-206ENST00000537058 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
CADM1-206ENST00000537058 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
CADM1-206ENST00000537058 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
CADM1-206ENST00000537058 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
CADM1-206ENST00000537058 MYT1Q01538 1121 aa20.06■□□□□ 0.8
CADM1-206ENST00000537058 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
CADM1-206ENST00000537058 DCAF1Q9Y4B6 1507 aa19.94■□□□□ 0.78
CADM1-206ENST00000537058 NEUROD1Q13562 356 aa19.83■□□□□ 0.76
CADM1-206ENST00000537058 ACIN1Q9UKV3 1341 aaKnown RBP19.82■□□□□ 0.76
CADM1-206ENST00000537058 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
CADM1-206ENST00000537058 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.75
CADM1-206ENST00000537058 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
CADM1-206ENST00000537058 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
CADM1-206ENST00000537058 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.73
CADM1-206ENST00000537058 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
CADM1-206ENST00000537058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.47■□□□□ 0.71
CADM1-206ENST00000537058 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
CADM1-206ENST00000537058 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
CADM1-206ENST00000537058 CCER1Q8TC90 406 aaPredicted RBP19.45■□□□□ 0.7
CADM1-206ENST00000537058 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
CADM1-206ENST00000537058 TRIM41Q8WV44 630 aa19.25■□□□□ 0.67
CADM1-206ENST00000537058 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
CADM1-206ENST00000537058 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
CADM1-206ENST00000537058 ZNF316A6NFI3 1004 aaPredicted RBP18.94■□□□□ 0.62
CADM1-206ENST00000537058 MIER1Q8N108 512 aa18.93■□□□□ 0.62
CADM1-206ENST00000537058 ANP32EQ9BTT0 268 aa18.8■□□□□ 0.6
CADM1-206ENST00000537058 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
CADM1-206ENST00000537058 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
CADM1-206ENST00000537058 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
CADM1-206ENST00000537058 BCANQ96GW7 911 aa18.6■□□□□ 0.57
CADM1-206ENST00000537058 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
CADM1-206ENST00000537058 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.55
CADM1-206ENST00000537058 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
CADM1-206ENST00000537058 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
CADM1-206ENST00000537058 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
CADM1-206ENST00000537058 ABCC9O60706 1549 aa18.33■□□□□ 0.52
CADM1-206ENST00000537058 FKBP8Q14318 412 aa18.3■□□□□ 0.52
CADM1-206ENST00000537058 PRKCSHP14314 528 aaPredicted RBP18.29■□□□□ 0.52
CADM1-206ENST00000537058 CEP162Q5TB80 1403 aa18.25■□□□□ 0.51
CADM1-206ENST00000537058 ITGAEP38570 1179 aa18.25■□□□□ 0.51
CADM1-206ENST00000537058 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
CADM1-206ENST00000537058 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
CADM1-206ENST00000537058 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
CADM1-206ENST00000537058 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
CADM1-206ENST00000537058 NEFLP07196 543 aa18.18■□□□□ 0.5
CADM1-206ENST00000537058 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
CADM1-206ENST00000537058 APLP2Q06481 763 aa18.12■□□□□ 0.49
CADM1-206ENST00000537058 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
CADM1-206ENST00000537058 MSH5O43196 834 aa18.04■□□□□ 0.48
CADM1-206ENST00000537058 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
CADM1-206ENST00000537058 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
CADM1-206ENST00000537058 SOGA1O94964 1423 aa17.98■□□□□ 0.47
CADM1-206ENST00000537058 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
CADM1-206ENST00000537058 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
CADM1-206ENST00000537058 DDX10Q13206 875 aaKnown RBP17.93■□□□□ 0.46
CADM1-206ENST00000537058 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
CADM1-206ENST00000537058 IRX6P78412 446 aaPredicted RBP17.91■□□□□ 0.46
CADM1-206ENST00000537058 DEKP35659 375 aaKnown RBP17.9■□□□□ 0.46
CADM1-206ENST00000537058 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
CADM1-206ENST00000537058 CDK11AQ9UQ88 783 aaPredicted RBP17.86■□□□□ 0.45
CADM1-206ENST00000537058 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
CADM1-206ENST00000537058 NBR1Q14596 966 aa17.84■□□□□ 0.45
CADM1-206ENST00000537058 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
CADM1-206ENST00000537058 DHX57Q6P158 1386 aaKnown RBP17.83■□□□□ 0.44
CADM1-206ENST00000537058 HIRIP3Q9BW71 556 aaPredicted RBP17.82■□□□□ 0.44
CADM1-206ENST00000537058 WIZO95785 1651 aa17.8■□□□□ 0.44
CADM1-206ENST00000537058 CLIP1P30622 1438 aa17.75■□□□□ 0.43
CADM1-206ENST00000537058 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
CADM1-206ENST00000537058 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
CADM1-206ENST00000537058 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
CADM1-206ENST00000537058 ANP32CO43423 234 aa17.7■□□□□ 0.42
CADM1-206ENST00000537058 RTN4Q9NQC3 1192 aaKnown RBP17.69■□□□□ 0.42
CADM1-206ENST00000537058 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
CADM1-206ENST00000537058 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
CADM1-206ENST00000537058 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
CADM1-206ENST00000537058 VPS8Q8N3P4 1428 aa17.64■□□□□ 0.41
CADM1-206ENST00000537058 EEA1Q15075 1411 aa17.61■□□□□ 0.41
CADM1-206ENST00000537058 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.6■□□□□ 0.41
CADM1-206ENST00000537058 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.41
CADM1-206ENST00000537058 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.41
CADM1-206ENST00000537058 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.41
CADM1-206ENST00000537058 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
CADM1-206ENST00000537058 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
CADM1-206ENST00000537058 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
CADM1-206ENST00000537058 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
CADM1-206ENST00000537058 IL27Q8NEV9 243 aa17.52■□□□□ 0.39
CADM1-206ENST00000537058 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.39
CADM1-206ENST00000537058 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
CADM1-206ENST00000537058 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
CADM1-206ENST00000537058 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
CADM1-206ENST00000537058 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
CADM1-206ENST00000537058 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms