RNA–Protein interactions for RNA: ENST00000550037.5

TMEM116-210, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-210ENST00000550037 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
TMEM116-210ENST00000550037 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
TMEM116-210ENST00000550037 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
TMEM116-210ENST00000550037 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
TMEM116-210ENST00000550037 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
TMEM116-210ENST00000550037 FOXD1Q16676 465 aa14.2□□□□□ -0.14
TMEM116-210ENST00000550037 MSH5O43196 834 aa13.62□□□□□ -0.23
TMEM116-210ENST00000550037 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
TMEM116-210ENST00000550037 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
TMEM116-210ENST00000550037 ADRA2BP18089 450 aa12.58□□□□□ -0.4
TMEM116-210ENST00000550037 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
TMEM116-210ENST00000550037 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-210ENST00000550037 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
TMEM116-210ENST00000550037 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-210ENST00000550037 RNF39Q9H2S5 420 aa11.54□□□□□ -0.56
TMEM116-210ENST00000550037 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
TMEM116-210ENST00000550037 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
TMEM116-210ENST00000550037 POTEHQ6S545 545 aa11.35□□□□□ -0.59
TMEM116-210ENST00000550037 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
TMEM116-210ENST00000550037 HOXD11P31277 338 aaPredicted RBP11.1□□□□□ -0.63
TMEM116-210ENST00000550037 NISCHQ9Y2I1 1504 aa10.89□□□□□ -0.67
TMEM116-210ENST00000550037 DNAJC5BQ9UF47 199 aa10.85□□□□□ -0.67
TMEM116-210ENST00000550037 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
TMEM116-210ENST00000550037 PPP4R3CPQ6ZMV5 832 aa10.73□□□□□ -0.69
TMEM116-210ENST00000550037 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
TMEM116-210ENST00000550037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM116-210ENST00000550037 DSG3P32926 999 aa10.53□□□□□ -0.72
TMEM116-210ENST00000550037 ABCC9O60706 1549 aa10.49□□□□□ -0.73
TMEM116-210ENST00000550037 CAPN15O75808 1086 aa10.44□□□□□ -0.74
TMEM116-210ENST00000550037 SPINK5Q9NQ38 1064 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-210ENST00000550037 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-210ENST00000550037 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-210ENST00000550037 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
TMEM116-210ENST00000550037 ABCB7O75027 752 aa10.13□□□□□ -0.79
TMEM116-210ENST00000550037 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
TMEM116-210ENST00000550037 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
TMEM116-210ENST00000550037 NCBP3Q53F19 620 aaKnown RBP10.08□□□□□ -0.8
TMEM116-210ENST00000550037 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-210ENST00000550037 APLP2Q06481 763 aa9.93□□□□□ -0.82
TMEM116-210ENST00000550037 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
TMEM116-210ENST00000550037 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
TMEM116-210ENST00000550037 HAX1O00165 279 aa9.84□□□□□ -0.83
TMEM116-210ENST00000550037 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
TMEM116-210ENST00000550037 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
TMEM116-210ENST00000550037 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
TMEM116-210ENST00000550037 PLSCR2Q9NRY7 297 aa9.75□□□□□ -0.85
TMEM116-210ENST00000550037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-210ENST00000550037 HNRNPUL2Q1KMD3 747 aaKnown RBP9.72□□□□□ -0.85
TMEM116-210ENST00000550037 SLC4A2P04920 1241 aa9.67□□□□□ -0.86
TMEM116-210ENST00000550037 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
TMEM116-210ENST00000550037 RB1CC1Q8TDY2 1594 aa9.66□□□□□ -0.86
TMEM116-210ENST00000550037 EVX2Q03828 476 aa9.62□□□□□ -0.87
TMEM116-210ENST00000550037 LHX8Q68G74 356 aa9.62□□□□□ -0.87
TMEM116-210ENST00000550037 SAMD1Q6SPF0 538 aaPredicted RBP9.62□□□□□ -0.87
TMEM116-210ENST00000550037 POLA2Q14181 598 aa9.6□□□□□ -0.87
TMEM116-210ENST00000550037 REM2Q8IYK8 340 aaPredicted RBP9.59□□□□□ -0.87
TMEM116-210ENST00000550037 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.88
TMEM116-210ENST00000550037 DCAF8L2P0C7V8 631 aa9.53□□□□□ -0.88
TMEM116-210ENST00000550037 PITPNM1O00562 1244 aa9.5□□□□□ -0.89
TMEM116-210ENST00000550037 NACADO15069 1562 aa9.47□□□□□ -0.89
TMEM116-210ENST00000550037 BICRAQ9NZM4 1560 aa9.47□□□□□ -0.89
TMEM116-210ENST00000550037 CECR2Q9BXF3 1484 aa9.47□□□□□ -0.89
TMEM116-210ENST00000550037 UNC13AQ9UPW8 1703 aa9.45□□□□□ -0.9
TMEM116-210ENST00000550037 CC2D2AQ9P2K1 1620 aa9.4□□□□□ -0.9
TMEM116-210ENST00000550037 GABBR2O75899 941 aa9.37□□□□□ -0.91
TMEM116-210ENST00000550037 OSCARQ8IYS5 282 aa9.34□□□□□ -0.91
TMEM116-210ENST00000550037 ZBTB12Q9Y330 459 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-210ENST00000550037 C19orf67A6NJJ6 358 aa9.29□□□□□ -0.92
TMEM116-210ENST00000550037 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
TMEM116-210ENST00000550037 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
TMEM116-210ENST00000550037 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
TMEM116-210ENST00000550037 TRIM41Q8WV44 630 aa9.2□□□□□ -0.94
TMEM116-210ENST00000550037 POTEIP0CG38 1075 aa9.15□□□□□ -0.94
TMEM116-210ENST00000550037 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.95
TMEM116-210ENST00000550037 SHROOM4Q9ULL8 1493 aa9.14□□□□□ -0.95
TMEM116-210ENST00000550037 CUX2O14529 1486 aa9.11□□□□□ -0.95
TMEM116-210ENST00000550037 POTEMA6NI47 508 aa9.11□□□□□ -0.95
TMEM116-210ENST00000550037 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
TMEM116-210ENST00000550037 SCRIBQ14160 1630 aa9.09□□□□□ -0.95
TMEM116-210ENST00000550037 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
TMEM116-210ENST00000550037 ATF5Q9Y2D1 282 aaPredicted RBP9.05□□□□□ -0.96
TMEM116-210ENST00000550037 ERCC6Q03468 1493 aa9.03□□□□□ -0.96
TMEM116-210ENST00000550037 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-210ENST00000550037 KCNA4P22459 653 aa9.01□□□□□ -0.97
TMEM116-210ENST00000550037 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
TMEM116-210ENST00000550037 DCBLD2Q96PD2 775 aa8.98□□□□□ -0.97
TMEM116-210ENST00000550037 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
TMEM116-210ENST00000550037 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
TMEM116-210ENST00000550037 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
TMEM116-210ENST00000550037 OTUD5Q96G74 571 aa8.97□□□□□ -0.97
TMEM116-210ENST00000550037 PCDH10Q9P2E7 1040 aa8.97□□□□□ -0.97
TMEM116-210ENST00000550037 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
TMEM116-210ENST00000550037 CLCN6P51797 869 aa8.91□□□□□ -0.98
TMEM116-210ENST00000550037 NESP48681 1621 aa8.9□□□□□ -0.99
TMEM116-210ENST00000550037 ZCCHC6Q5VYS8 1495 aaKnown RBP8.89□□□□□ -0.99
TMEM116-210ENST00000550037 DCAF1Q9Y4B6 1507 aa8.88□□□□□ -0.99
TMEM116-210ENST00000550037 POTEB2H3BUK9 544 aa8.83□□□□□ -1
TMEM116-210ENST00000550037 PRR29P0C7W0 189 aa8.81□□□□□ -1
TMEM116-210ENST00000550037 NCAPD3P42695 1498 aa8.8□□□□□ -1
TMEM116-210ENST00000550037 THOC2Q8NI27 1593 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 402.9 ms