RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
TMEM116-213ENST00000550831 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
TMEM116-213ENST00000550831 NISCHQ9Y2I1 1504 aa20.54■□□□□ 0.88
TMEM116-213ENST00000550831 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
TMEM116-213ENST00000550831 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
TMEM116-213ENST00000550831 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
TMEM116-213ENST00000550831 ABCC9O60706 1549 aa17.68■□□□□ 0.42
TMEM116-213ENST00000550831 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
TMEM116-213ENST00000550831 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.35
TMEM116-213ENST00000550831 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
TMEM116-213ENST00000550831 FOXD1Q16676 465 aa16.97■□□□□ 0.31
TMEM116-213ENST00000550831 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
TMEM116-213ENST00000550831 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
TMEM116-213ENST00000550831 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
TMEM116-213ENST00000550831 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
TMEM116-213ENST00000550831 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
TMEM116-213ENST00000550831 NACADO15069 1562 aa16.6■□□□□ 0.25
TMEM116-213ENST00000550831 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
TMEM116-213ENST00000550831 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
TMEM116-213ENST00000550831 ADRA2BP18089 450 aa16.36■□□□□ 0.21
TMEM116-213ENST00000550831 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
TMEM116-213ENST00000550831 SCRIBQ14160 1630 aa16.31■□□□□ 0.2
TMEM116-213ENST00000550831 BICRAQ9NZM4 1560 aa16.28■□□□□ 0.2
TMEM116-213ENST00000550831 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
TMEM116-213ENST00000550831 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
TMEM116-213ENST00000550831 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
TMEM116-213ENST00000550831 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
TMEM116-213ENST00000550831 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
TMEM116-213ENST00000550831 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
TMEM116-213ENST00000550831 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
TMEM116-213ENST00000550831 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.12
TMEM116-213ENST00000550831 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
TMEM116-213ENST00000550831 WIZO95785 1651 aa15.69■□□□□ 0.1
TMEM116-213ENST00000550831 MSH5O43196 834 aa15.67■□□□□ 0.1
TMEM116-213ENST00000550831 PEG3Q9GZU2 1588 aa15.64■□□□□ 0.09
TMEM116-213ENST00000550831 DNAJC5Q9H3Z4 198 aa15.62■□□□□ 0.09
TMEM116-213ENST00000550831 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
TMEM116-213ENST00000550831 SMARCA2P51531 1590 aa15.46■□□□□ 0.06
TMEM116-213ENST00000550831 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
TMEM116-213ENST00000550831 CUX2O14529 1486 aa15.41■□□□□ 0.06
TMEM116-213ENST00000550831 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
TMEM116-213ENST00000550831 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
TMEM116-213ENST00000550831 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
TMEM116-213ENST00000550831 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
TMEM116-213ENST00000550831 ERCC6Q03468 1493 aa15.3■□□□□ 0.04
TMEM116-213ENST00000550831 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
TMEM116-213ENST00000550831 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
TMEM116-213ENST00000550831 NESP48681 1621 aa15.11■□□□□ 0.01
TMEM116-213ENST00000550831 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
TMEM116-213ENST00000550831 ABCC8Q09428 1581 aa15.07■□□□□ 0
TMEM116-213ENST00000550831 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
TMEM116-213ENST00000550831 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
TMEM116-213ENST00000550831 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
TMEM116-213ENST00000550831 CFTRP13569 1480 aa15□□□□□ -0.01
TMEM116-213ENST00000550831 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
TMEM116-213ENST00000550831 EEA1Q15075 1411 aa14.99□□□□□ -0.01
TMEM116-213ENST00000550831 LOC105371045A0A1W2PR82 267 aa14.96□□□□□ -0.01
TMEM116-213ENST00000550831 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.02
TMEM116-213ENST00000550831 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
TMEM116-213ENST00000550831 KCNA4P22459 653 aa14.93□□□□□ -0.02
TMEM116-213ENST00000550831 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
TMEM116-213ENST00000550831 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
TMEM116-213ENST00000550831 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
TMEM116-213ENST00000550831 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
TMEM116-213ENST00000550831 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
TMEM116-213ENST00000550831 SOGA1O94964 1423 aa14.84□□□□□ -0.03
TMEM116-213ENST00000550831 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
TMEM116-213ENST00000550831 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
TMEM116-213ENST00000550831 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
TMEM116-213ENST00000550831 WDR62O43379 1518 aa14.8□□□□□ -0.04
TMEM116-213ENST00000550831 CUX1P39880 1505 aa14.8□□□□□ -0.04
TMEM116-213ENST00000550831 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
TMEM116-213ENST00000550831 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.04
TMEM116-213ENST00000550831 KIF21BO75037 1637 aa14.76□□□□□ -0.05
TMEM116-213ENST00000550831 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
TMEM116-213ENST00000550831 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
TMEM116-213ENST00000550831 GOLGA3Q08378 1498 aa14.71□□□□□ -0.05
TMEM116-213ENST00000550831 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
TMEM116-213ENST00000550831 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
TMEM116-213ENST00000550831 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
TMEM116-213ENST00000550831 ERICH3Q5RHP9 1530 aa14.65□□□□□ -0.06
TMEM116-213ENST00000550831 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
TMEM116-213ENST00000550831 KIF27Q86VH2 1401 aa14.63□□□□□ -0.07
TMEM116-213ENST00000550831 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
TMEM116-213ENST00000550831 NPM3O75607 178 aaKnown RBP14.61□□□□□ -0.07
TMEM116-213ENST00000550831 CEP162Q5TB80 1403 aa14.6□□□□□ -0.07
TMEM116-213ENST00000550831 FGD5Q6ZNL6 1462 aa14.59□□□□□ -0.07
TMEM116-213ENST00000550831 OSCARQ8IYS5 282 aa14.58□□□□□ -0.07
TMEM116-213ENST00000550831 TOPBP1Q92547 1522 aa14.57□□□□□ -0.08
TMEM116-213ENST00000550831 RAPGEF2Q9Y4G8 1499 aa14.55□□□□□ -0.08
TMEM116-213ENST00000550831 URB2Q14146 1524 aaKnown RBP14.54□□□□□ -0.08
TMEM116-213ENST00000550831 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
TMEM116-213ENST00000550831 ABCA10Q8WWZ4 1543 aa14.53□□□□□ -0.08
TMEM116-213ENST00000550831 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
TMEM116-213ENST00000550831 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
TMEM116-213ENST00000550831 WDR97A6NE52 1622 aa14.49□□□□□ -0.09
TMEM116-213ENST00000550831 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
TMEM116-213ENST00000550831 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
TMEM116-213ENST00000550831 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
TMEM116-213ENST00000550831 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms